bases per tick :
500
200
100
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kb first site :
main :
All Human Genes
JIGSAW prediction
ESTs assembly
homology :
UCSC
CCDS
Pseudogene.org
Conserved regions (
Segmental duplication
P.troglodytes
P.abelii
M.mulatta
M.musculus
R.norvegicus
C.familiaris
E.caballus
B.taurus
M.domestica
G.gallus
D.rerio
O.latipes
T.nigroviridis
T.rubripes
)
gene prediction :
FGENESH
GenScan
HMMgene
tRNA
show... :
SNPs
ESTs(summary)
ESTs(detail)
CAGE tag(summary)
CAGE tag(detail)
sequence viewer :
( start, end )
( middle, total length )
= (
,
)
HIX0170876
HIT000530151 (
ENST00000432217
)
(Ribosomal protein L22/L17 family protein.)
genome : 66,380,131 - 66,380,679 (549)
query : 1 - 549 (549/549)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 12.5, cyto_nucl 11.3333, extr 8,
cyto_plas 7.33333, nucl 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0170876)
HIX0035442
HIT000196045
(
M62895
)
Representative transcript
(Annexin A2; Annexin II; Annexin-2; Calpactin I heavy chain; Calpactin-1 heavy chain; Chromobindin-8; Lipocortin II; Placental anticoagulant protein IV; PAP-IV; Protein I; p36;)
genome : 66,585,280 - 66,586,634 (1,355)
query : 1 - 1,361 (1,361/1,361)
1 exon
identity = 0.979
5'(0.979)3'
coverage = 1.000
InterPro :
IPR001464 : Annexin
IPR002389 : Annexin, type II
IPR018502 : Annexin repeat
GO :
0004859 : Molecular Function : phospholipase inhibitor activity
0005509 : Molecular Function : calcium ion binding
0005544 : Molecular Function : calcium-dependent phospholipid binding
0008092 : Molecular Function : cytoskeletal protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, extr 15
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0035442)
Ortholog candidate ( ->
Evola
)
Danio
sp. (Zebrafish) : BC110093
Oryzias
sp. (Medaka) : ENSORLT00000009539
Pongo
sp. (Orangutan) : ENSPPYT00000002887
Takifugu
sp. (Fugu) : SINFRUT00000156244
Gallus
sp. (Chicken) : X53334
Macaca
sp. (Macaque) : XR_010844
Pan
sp. (Chimpanzee) : XR_024974
HIX0035442
HIT000320663 (
NR_001446
)
(Annexin A2; Annexin II; Annexin-2; Calpactin I heavy chain; Calpactin-1 heavy chain; Chromobindin-8; Lipocortin II; Placental anticoagulant protein IV; PAP-IV; Protein I; p36;)
genome : 66,585,285 - 66,586,634 (1,350)
query : 1 - 1,350 (1,350/1,350)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, extr 15
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0035442)
HIX0035442
HIT000505011 (
ENST00000404883
)
(Annexin A2; Annexin II; Annexin-2; Calpactin I heavy chain; Calpactin-1 heavy chain; Chromobindin-8; Lipocortin II; Placental anticoagulant protein IV; PAP-IV; Protein I; p36;)
genome : 66,585,329 - 66,586,336 (1,008)
query : 1 - 1,008 (1,008/1,008)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, extr 15
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0035442)
HIX0035638
HIT000099102
(
BC050028
)
Representative transcript
(Conserved hypothetical protein.)
genome : 66,660,894 - 66,684,276 (23,383)
query : 1 - 2,576 (2,576/2,606)
2 exons
identity = 0.996
3'(0.996;0.996)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 24, nucl 4, cyto 4, cyto_nucl 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0035638)
HIX0035638
HIT000523836 (
ENST00000425902
)
(Conserved hypothetical protein.)
genome : 66,662,885 - 66,684,276 (21,392)
query : 1 - 581 (581/581)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 24, nucl 4, cyto 4, cyto_nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0035638)
HIX0170950
HIT000534838 (
ENST00000436904
)
(Conserved hypothetical protein.)
genome : 66,929,196 - 66,929,627 (432)
query : 1 - 432 (432/432)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 24.5, cyto_nucl 15, mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0170950)
HIX0171006
HIT000539109 (
ENST00000441175
)
(WW domain containing protein.)
genome : 67,007,790 - 67,008,550 (761)
query : 1 - 761 (761/761)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16.5, cyto_nucl 12.5, nucl 5.5, cysk 5, extr 2,
mito 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0171006)
HIX0170819
HIT000526280 (
ENST00000428346
)
(Non-protein coding transcript.)
genome : 67,073,543 - 67,074,728 (1,186)
query : 1 - 307 (307/307)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0170819)
HIX0170891
HIT000531086 (
ENST00000433152
)
(Conserved hypothetical protein.)
genome : 67,330,208 - 67,441,220 (111,013)
query : 1 - 1,223 (1,223/1,223)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 18, nucl 5, mito 5, mito_nucl 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0170891)
HIX0170891
HIT000713713 (
ENST00000601979
)
(Conserved hypothetical protein.)
genome : 67,330,210 - 67,375,515 (45,306)
query : 1 - 559 (559/559)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0170891)
HIX0170891
HIT000711164 (
ENST00000599409
)
(Conserved hypothetical protein.)
genome : 67,330,260 - 67,345,559 (15,300)
query : 1 - 755 (755/755)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0170891)
HIX0170891
HIT000705379 (
ENST00000593568
)
(Conserved hypothetical protein.)
genome : 67,330,633 - 67,375,515 (44,883)
query : 1 - 1,032 (1,032/1,032)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17, cyto_nucl 14.5, extr 9, nucl 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0170891)
HIX0170891
HIT000707064 (
ENST00000595269
)
(Non-protein coding transcript.)
genome : 67,375,394 - 67,526,299 (150,906)
query : 1 - 402 (402/402)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0170891)
HIX0170891
HIT000709863 (
ENST00000598092
)
(Conserved hypothetical protein.)
genome : 67,375,445 - 67,432,296 (56,852)
query : 1 - 485 (485/485)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0170891)
HIX0170891
HIT000713625 (
ENST00000601888
)
(Conserved hypothetical protein.)
genome : 67,375,491 - 67,430,594 (55,104)
query : 1 - 781 (781/781)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 28, mito 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0170891)
HIX0170891
HIT000713661 (
ENST00000601926
)
(Hypothetical short protein.)
genome : 67,375,491 - 67,420,280 (44,790)
query : 1 - 757 (757/757)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 20, nucl 6.5, cyto_nucl 5, cyto 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0170891)
HIX0170891
HIT000710665 (
ENST00000598902
)
(Conserved hypothetical protein.)
genome : 67,375,491 - 67,392,586 (17,096)
query : 1 - 778 (778/778)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0170891)
HIX0170891
HIT000713128 (
ENST00000601389
)
(Conserved hypothetical protein.)
genome : 67,375,491 - 67,388,661 (13,171)
query : 1 - 920 (920/920)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 25.5, mito_pero 14.5, pero 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0170891)
HIX0170891
HIT000708529 (
ENST00000596743
)
(Hypothetical short protein.)
genome : 67,375,492 - 67,375,947 (456)
query : 1 - 456 (456/456)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, mito 10, cyto 5, E.R._mito 5, mito_pero 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0170891)
HIX0170891
HIT000712590 (
ENST00000600848
)
(Conserved hypothetical protein.)
genome : 67,375,495 - 67,458,474 (82,980)
query : 1 - 748 (748/748)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 11, cyto_nucl 9.33333, cyto 6.5, nucl 6,
cyto_pero 6, mito_nucl 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0170891)
HIX0170891
HIT000705863 (
ENST00000594054
)
(Hypothetical short protein.)
genome : 67,375,495 - 67,442,990 (67,496)
query : 1 - 1,068 (1,068/1,068)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 28, pero 1.5, mito_pero 1.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0170891)
AC018977.9
66000001-66039947 F +
NCBI
AC027670.6
66039948-66229753 F +
NCBI
AL512450.15
66229754-66265434 F +
NCBI
AC013287.11
66265435-66437174 F +
NCBI
AC069020.8
66437175-66606587 F +
NCBI
AC024600.5
66606588-66708284 F +
NCBI
AL590411.7
66708285-66836719 F +
NCBI
AL590324.3
66836720-66838713 F +
NCBI
AL513321.8
66838714-67017689 F +
NCBI
AL591687.9
67017690-67032386 F +
NCBI
AL592466.9
67032387-67143657 F +
NCBI
AL390865.10
67143658-67278574 F +
NCBI
AC020641.8
67278575-67444672 F +
NCBI
AC022538.7
67444673-67528648 F -
NCBI
AC018979.9
67528649-67600000 F +
NCBI