bases per tick :
500
200
100
50
20
10
5
2
kb first site :
main :
All Human Genes
JIGSAW prediction
ESTs assembly
homology :
UCSC
CCDS
Pseudogene.org
Conserved regions (
Segmental duplication
P.troglodytes
P.abelii
M.mulatta
M.musculus
R.norvegicus
C.familiaris
E.caballus
B.taurus
M.domestica
G.gallus
D.rerio
O.latipes
T.nigroviridis
T.rubripes
)
gene prediction :
FGENESH
GenScan
HMMgene
tRNA
show... :
SNPs
ESTs(summary)
ESTs(detail)
CAGE tag(summary)
CAGE tag(detail)
sequence viewer :
( start, end )
( middle, total length )
= (
,
)
HIX0170982
HIT000537509 (
ENST00000439575
)
(Conserved hypothetical protein.)
genome : 3,052,723 - 3,055,303 (2,581)
query : 1 - 608 (608/608)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, mito 11, nucl 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0170982)
HIX0008596
HIT000040690
(
BC029138
)
Representative transcript
(6-phosphofructokinase type C; EC=2.7.1.11; 6-phosphofructokinase, platelet type; Phosphofructo-1-kinase isozyme C; PFK-C; Phosphofructokinase 1; Phosphohexokinase;)
genome : 3,109,712 - 3,178,985 (69,274)
query : 1 - 2,645 (2,645/2,671)
22 exons
identity = 0.997
5'(1.000;1.000;1.000;0.995;0.994;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;0.993;1.000;
1.000;1.000;0.994;1.000;1.000;1.000;1.000;
0.991)3'
coverage = 0.999
EC number :
EC 2.7.1.11
KEGG pathway :
00010 : Glycolysis / Gluconeogenesis (45)
00030 : Pentose phosphate pathway (39)
00051 : Fructose and mannose metabolism (61)
00052 : Galactose metabolism (37)
00680 : Methane metabolism (75)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
01120 : Microbial metabolism in diverse environments (468)
InterPro :
IPR000023 : Phosphofructokinase domain
IPR009161 : 6-phosphofructokinase, eukaryotic type
IPR015912 : Phosphofructokinase, conserved site
IPR022953 : Phosphofructokinase
GO :
0003872 : Molecular Function : 6-phosphofructokinase activity
0005737 : Cellular Component : cytoplasm
0005945 : Cellular Component : 6-phosphofructokinase complex
0006002 : Biological Process : fructose 6-phosphate metabolic process
0006096 : Biological Process : glycolytic process
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18, cyto_nucl 13, nucl 6, pero 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008596)
Ortholog candidate ( ->
Evola
)
Gallus
sp. (Chicken) : AJ721040
Mus
sp. (Mouse) : AK049841
Rattus
sp. (Rat) : BC088847
Pongo
sp. (Orangutan) : CR860660
Danio
sp. (Zebrafish) : ENSDART00000056280
Macaca
sp. (Macaque) : ENSMMUT00000006964
Oryzias
sp. (Medaka) : ENSORLT00000006216
Oryzias
sp. (Medaka) : ENSORLT00000007224
Pan
sp. (Chimpanzee) : ENSPTRT00000048631
Tetraodon
sp. (Tetraodon) : GSTENT00015248001
Tetraodon
sp. (Tetraodon) : GSTENT00016608001
Takifugu
sp. (Fugu) : SINFRUT00000181974
Monodelphis
sp. (Opossum) : XM_001373982
Equus
sp. (Horse) : XM_001500490
Canis
sp. (Dog) : XM_535201
Danio
sp. (Zebrafish) : XM_684343
Bos
sp. (Cow) : XM_874285
HIX0008596
HIT000199514 (
NM_002627
)
(6-phosphofructokinase type C; EC=2.7.1.11; 6-phosphofructokinase, platelet type; Phosphofructo-1-kinase isozyme C; PFK-C; Phosphofructokinase 1; Phosphohexokinase;)
genome : 3,109,712 - 3,178,997 (69,286)
query : 1 - 2,657 (2,657/2,657)
22 exons
identity = 1.000
5'(1.000;1.000;1.000;0.995;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
EC number :
EC 2.7.1.11
KEGG pathway :
00010 : Glycolysis / Gluconeogenesis (45)
00030 : Pentose phosphate pathway (39)
00051 : Fructose and mannose metabolism (61)
00052 : Galactose metabolism (37)
00680 : Methane metabolism (75)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
01120 : Microbial metabolism in diverse environments (468)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18, cyto_nucl 13, nucl 6, pero 4
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008596)
HIX0008596
HIT000362403 (
ENST00000381125
)
(6-phosphofructokinase type C; EC=2.7.1.11; 6-phosphofructokinase, platelet type; Phosphofructo-1-kinase isozyme C; PFK-C; Phosphofructokinase 1; Phosphohexokinase;)
genome : 3,109,712 - 3,178,985 (69,274)
query : 1 - 2,645 (2,645/2,645)
22 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
EC number :
EC 2.7.1.11
KEGG pathway :
00010 : Glycolysis / Gluconeogenesis (45)
00030 : Pentose phosphate pathway (39)
00051 : Fructose and mannose metabolism (61)
00052 : Galactose metabolism (37)
00680 : Methane metabolism (75)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
01120 : Microbial metabolism in diverse environments (468)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18, cyto_nucl 13, nucl 6, pero 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008596)
HIX0008596
HIT000424638
(
AK291841
)
(6-phosphofructokinase type C; EC=2.7.1.11; 6-phosphofructokinase, platelet type; Phosphofructo-1-kinase isozyme C; PFK-C; Phosphofructokinase 1; Phosphohexokinase;)
genome : 3,109,740 - 3,178,997 (69,258)
query : 1 - 2,625 (2,625/2,625)
22 exons
identity = 0.995
5'(1.000;1.000;1.000;0.995;1.000;1.000;1.000;
1.000;1.000;1.000;0.985;1.000;0.993;1.000;
1.000;1.000;0.988;1.000;1.000;1.000;1.000;
0.975)3'
coverage = 1.000
EC number :
EC 2.7.1.11
KEGG pathway :
00010 : Glycolysis / Gluconeogenesis (45)
00030 : Pentose phosphate pathway (39)
00051 : Fructose and mannose metabolism (61)
00052 : Galactose metabolism (37)
00680 : Methane metabolism (75)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
01120 : Microbial metabolism in diverse environments (468)
InterPro :
IPR000023 : Phosphofructokinase domain
IPR009161 : 6-phosphofructokinase, eukaryotic type
IPR015912 : Phosphofructokinase, conserved site
IPR022953 : Phosphofructokinase
GO :
0003872 : Molecular Function : 6-phosphofructokinase activity
0005737 : Cellular Component : cytoplasm
0005945 : Cellular Component : 6-phosphofructokinase complex
0006002 : Biological Process : fructose 6-phosphate metabolic process
0006096 : Biological Process : glycolytic process
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18, cyto_nucl 13, nucl 6, pero 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008596)
HIX0008596
HIT000030973
(
BC002536
)
(6-phosphofructokinase type C; EC=2.7.1.11; 6-phosphofructokinase, platelet type; Phosphofructo-1-kinase isozyme C; PFK-C; Phosphofructokinase 1; Phosphohexokinase;)
genome : 3,109,752 - 3,178,993 (69,242)
query : 1 - 2,613 (2,613/2,636)
22 exons
identity = 0.999
5'(1.000;1.000;1.000;0.995;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;0.993;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.997)3'
coverage = 1.000
EC number :
EC 2.7.1.11
KEGG pathway :
00010 : Glycolysis / Gluconeogenesis (45)
00030 : Pentose phosphate pathway (39)
00051 : Fructose and mannose metabolism (61)
00052 : Galactose metabolism (37)
00680 : Methane metabolism (75)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
01120 : Microbial metabolism in diverse environments (468)
InterPro :
IPR000023 : Phosphofructokinase domain
IPR009161 : 6-phosphofructokinase, eukaryotic type
IPR015912 : Phosphofructokinase, conserved site
IPR022953 : Phosphofructokinase
GO :
0003872 : Molecular Function : 6-phosphofructokinase activity
0005737 : Cellular Component : cytoplasm
0005945 : Cellular Component : 6-phosphofructokinase complex
0006002 : Biological Process : fructose 6-phosphate metabolic process
0006096 : Biological Process : glycolytic process
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18, cyto_nucl 13, nucl 6, pero 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008596)
HIX0008596
HIT000101126
(
D25328
)
(6-phosphofructokinase type C; EC=2.7.1.11; 6-phosphofructokinase, platelet type; Phosphofructo-1-kinase isozyme C; PFK-C; Phosphofructokinase 1; Phosphohexokinase;)
genome : 3,109,755 - 3,178,974 (69,220)
query : 1 - 2,591 (2,591/2,591)
22 exons
identity = 0.999
5'(1.000;1.000;1.000;0.995;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;0.993;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.997)3'
coverage = 1.000
EC number :
EC 2.7.1.11
KEGG pathway :
00010 : Glycolysis / Gluconeogenesis (45)
00030 : Pentose phosphate pathway (39)
00051 : Fructose and mannose metabolism (61)
00052 : Galactose metabolism (37)
00680 : Methane metabolism (75)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
01120 : Microbial metabolism in diverse environments (468)
InterPro :
IPR000023 : Phosphofructokinase domain
IPR009161 : 6-phosphofructokinase, eukaryotic type
IPR015912 : Phosphofructokinase, conserved site
IPR022953 : Phosphofructokinase
GO :
0003872 : Molecular Function : 6-phosphofructokinase activity
0005737 : Cellular Component : cytoplasm
0005945 : Cellular Component : 6-phosphofructokinase complex
0006002 : Biological Process : fructose 6-phosphate metabolic process
0006096 : Biological Process : glycolytic process
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18, cyto_nucl 13, nucl 6, pero 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008596)
HIX0008596
HIT000599073 (
ENST00000495715
)
(Hypothetical short protein.)
genome : 3,109,864 - 3,111,572 (1,709)
query : 1 - 143 (143/143)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008596)
HIX0008596
HIT000657516 (
NM_001242339
)
(6-phosphofructokinase type C isoform 2.)
genome : 3,110,819 - 3,178,997 (68,179)
query : 1 - 2,781 (2,781/2,781)
24 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;0.995;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.7.1.11
KEGG pathway :
00010 : Glycolysis / Gluconeogenesis (45)
00030 : Pentose phosphate pathway (39)
00051 : Fructose and mannose metabolism (61)
00052 : Galactose metabolism (37)
00680 : Methane metabolism (75)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
01120 : Microbial metabolism in diverse environments (468)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, cyto_nucl 15, nucl 12
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008596)
HIX0008596
HIT000017464
(
AK092597
)
(6-phosphofructokinase type C isoform 2.)
genome : 3,110,819 - 3,178,992 (68,174)
query : 1 - 2,776 (2,776/2,776)
24 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;0.995;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.993;1.000;1.000;1.000;1.000;1.000;0.991;
1.000;1.000;0.997)3'
coverage = 1.000
EC number :
EC 2.7.1.11
KEGG pathway :
00010 : Glycolysis / Gluconeogenesis (45)
00030 : Pentose phosphate pathway (39)
00051 : Fructose and mannose metabolism (61)
00052 : Galactose metabolism (37)
00680 : Methane metabolism (75)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
01120 : Microbial metabolism in diverse environments (468)
InterPro :
IPR000023 : Phosphofructokinase domain
IPR009161 : 6-phosphofructokinase, eukaryotic type
IPR015912 : Phosphofructokinase, conserved site
IPR022953 : Phosphofructokinase
GO :
0003872 : Molecular Function : 6-phosphofructokinase activity
0005737 : Cellular Component : cytoplasm
0005945 : Cellular Component : 6-phosphofructokinase complex
0006002 : Biological Process : fructose 6-phosphate metabolic process
0006096 : Biological Process : glycolytic process
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, cyto_nucl 15, nucl 12
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008596)
HIX0008596
HIT000362353 (
ENST00000381075
)
(6-phosphofructokinase type C isoform 2.)
genome : 3,110,819 - 3,178,985 (68,167)
query : 1 - 2,769 (2,769/2,769)
24 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.7.1.11
KEGG pathway :
00010 : Glycolysis / Gluconeogenesis (45)
00030 : Pentose phosphate pathway (39)
00051 : Fructose and mannose metabolism (61)
00052 : Galactose metabolism (37)
00680 : Methane metabolism (75)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
01120 : Microbial metabolism in diverse environments (468)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, cyto_nucl 15, nucl 12
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008596)
HIX0008596
HIT000519685 (
ENST00000421751
)
(6-phosphofructokinase type C isoform 1.)
genome : 3,111,425 - 3,146,129 (34,705)
query : 1 - 658 (658/658)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.7.1.11
KEGG pathway :
00010 : Glycolysis / Gluconeogenesis (45)
00030 : Pentose phosphate pathway (39)
00051 : Fructose and mannose metabolism (61)
00052 : Galactose metabolism (37)
00680 : Methane metabolism (75)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
01120 : Microbial metabolism in diverse environments (468)
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 18, cyto 6.5, cyto_nucl 5.5, extr 3, pero 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008596)
HIX0008596
HIT000426869
(
AK308003
)
(6-phosphofructokinase type C isoform 1.)
genome : 3,111,430 - 3,178,876 (67,447)
query : 1 - 2,499 (2,499/2,499)
22 exons
identity = 0.997
5'(1.000;1.000;1.000;0.989;1.000;1.000;1.000;
0.990;1.000;0.992;1.000;1.000;0.993;1.000;
1.000;1.000;0.988;1.000;1.000;1.000;1.000;
0.996)3'
coverage = 1.000
EC number :
EC 2.7.1.11
KEGG pathway :
00010 : Glycolysis / Gluconeogenesis (45)
00030 : Pentose phosphate pathway (39)
00051 : Fructose and mannose metabolism (61)
00052 : Galactose metabolism (37)
00680 : Methane metabolism (75)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
01120 : Microbial metabolism in diverse environments (468)
InterPro :
IPR000023 : Phosphofructokinase domain
IPR009161 : 6-phosphofructokinase, eukaryotic type
IPR015912 : Phosphofructokinase, conserved site
IPR022953 : Phosphofructokinase
GO :
0003872 : Molecular Function : 6-phosphofructokinase activity
0005737 : Cellular Component : cytoplasm
0005945 : Cellular Component : 6-phosphofructokinase complex
0006002 : Biological Process : fructose 6-phosphate metabolic process
0006096 : Biological Process : glycolytic process
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 20, cyto 6, extr 2, nucl 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008596)
HIX0008596
HIT000506106 (
ENST00000407806
)
(6-phosphofructokinase type C isoform 1.)
genome : 3,112,437 - 3,147,665 (35,229)
query : 1 - 705 (705/705)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.7.1.11
KEGG pathway :
00010 : Glycolysis / Gluconeogenesis (45)
00030 : Pentose phosphate pathway (39)
00051 : Fructose and mannose metabolism (61)
00052 : Galactose metabolism (37)
00680 : Methane metabolism (75)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
01120 : Microbial metabolism in diverse environments (468)
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 16, cyto 7.5, cyto_nucl 7, extr 4, nucl 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008596)
HIX0008596
HIT000427092
(
AK308226
)
(6-phosphofructokinase type C isoform 2.)
genome : 3,146,885 - 3,172,164 (25,280)
query : 1 - 1,314 (1,314/1,314)
13 exons
identity = 0.996
5'(1.000;1.000;1.000;0.990;0.989;1.000;1.000;
1.000;0.993;1.000;1.000;1.000;0.987)3'
coverage = 1.000
EC number :
EC 2.7.1.11
KEGG pathway :
00010 : Glycolysis / Gluconeogenesis (45)
00030 : Pentose phosphate pathway (39)
00051 : Fructose and mannose metabolism (61)
00052 : Galactose metabolism (37)
00680 : Methane metabolism (75)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
01120 : Microbial metabolism in diverse environments (468)
InterPro :
IPR000023 : Phosphofructokinase domain
IPR015912 : Phosphofructokinase, conserved site
IPR022953 : Phosphofructokinase
GO :
0003872 : Molecular Function : 6-phosphofructokinase activity
0005945 : Cellular Component : 6-phosphofructokinase complex
0006002 : Biological Process : fructose 6-phosphate metabolic process
0006096 : Biological Process : glycolytic process
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 12, extr 7, cyto_mito 7, E.R. 4, pero 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008596)
HIX0008596
HIT000512939 (
ENST00000415005
)
(6-phosphofructokinase type C; EC=2.7.1.11; Phosphofructo-1-kinase isozyme C; PFK-C; Phosphofructokinase 1; Phosphohexokinase;)
genome : 3,146,916 - 3,155,708 (8,793)
query : 1 - 1,140 (1,140/1,140)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
EC number :
EC 2.7.1.11
KEGG pathway :
00010 : Glycolysis / Gluconeogenesis (45)
00030 : Pentose phosphate pathway (39)
00051 : Fructose and mannose metabolism (61)
00052 : Galactose metabolism (37)
00680 : Methane metabolism (75)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
01120 : Microbial metabolism in diverse environments (468)
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, cyto 5, pero 4, lyso 3, cyto_mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008596)
HIX0008596
HIT000572632 (
ENST00000468050
)
(6-phosphofructokinase type C isoform 2.)
genome : 3,146,939 - 3,151,586 (4,648)
query : 1 - 425 (425/425)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.7.1.11
KEGG pathway :
00010 : Glycolysis / Gluconeogenesis (45)
00030 : Pentose phosphate pathway (39)
00051 : Fructose and mannose metabolism (61)
00052 : Galactose metabolism (37)
00680 : Methane metabolism (75)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
01120 : Microbial metabolism in diverse environments (468)
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 22, cyto 5, lyso 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008596)
HIX0008596
HIT000565373 (
ENST00000460445
)
(6-phosphofructokinase; Phosphofructokinase; EC=2.7.1.11; Phosphohexokinase; Fragment;)
genome : 3,147,071 - 3,147,693 (623)
query : 1 - 532 (532/552)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 0.964
EC number :
EC 2.7.1.11
KEGG pathway :
00010 : Glycolysis / Gluconeogenesis (45)
00030 : Pentose phosphate pathway (39)
00051 : Fructose and mannose metabolism (61)
00052 : Galactose metabolism (37)
00680 : Methane metabolism (75)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
01120 : Microbial metabolism in diverse environments (468)
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 27, cyto 3, cyto_nucl 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008596)
HIX0008596
HIT000428558
(
AK309692
)
(6-phosphofructokinase type C isoform 2.)
genome : 3,149,950 - 3,178,992 (29,043)
query : 1 - 1,948 (1,948/1,948)
15 exons
identity = 0.994
5'(1.000;1.000;1.000;1.000;0.986;0.993;1.000;
1.000;1.000;0.988;1.000;1.000;1.000;1.000;
0.977)3'
coverage = 1.000
EC number :
EC 2.7.1.11
KEGG pathway :
00010 : Glycolysis / Gluconeogenesis (45)
00030 : Pentose phosphate pathway (39)
00051 : Fructose and mannose metabolism (61)
00052 : Galactose metabolism (37)
00680 : Methane metabolism (75)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
01120 : Microbial metabolism in diverse environments (468)
InterPro :
IPR000023 : Phosphofructokinase domain
IPR015912 : Phosphofructokinase, conserved site
IPR022953 : Phosphofructokinase
GO :
0003872 : Molecular Function : 6-phosphofructokinase activity
0005945 : Cellular Component : 6-phosphofructokinase complex
0006002 : Biological Process : fructose 6-phosphate metabolic process
0006096 : Biological Process : glycolytic process
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 9, plas 6, mito 5, E.R._mito 4.83333,
mito_pero 4.33333, E.R. 3.5, cyto 3, cysk_plas 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008596)
HIX0008596
HIT000090447
(
BC021698
)
(6-phosphofructokinase type C isoform 1.)
genome : 3,151,597 - 3,178,986 (27,390)
query : 3 - 1,559 (1,557/1,589)
13 exons
identity = 0.999
5'(1.000;1.000;0.986;0.993;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 0.997
EC number :
EC 2.7.1.11
KEGG pathway :
00010 : Glycolysis / Gluconeogenesis (45)
00030 : Pentose phosphate pathway (39)
00051 : Fructose and mannose metabolism (61)
00052 : Galactose metabolism (37)
00680 : Methane metabolism (75)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
01120 : Microbial metabolism in diverse environments (468)
InterPro :
IPR000023 : Phosphofructokinase domain
IPR015912 : Phosphofructokinase, conserved site
IPR022953 : Phosphofructokinase
GO :
0003872 : Molecular Function : 6-phosphofructokinase activity
0005945 : Cellular Component : 6-phosphofructokinase complex
0006002 : Biological Process : fructose 6-phosphate metabolic process
0006096 : Biological Process : glycolytic process
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18.5, cyto_nucl 11.5, cysk 5, nucl 3.5, mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008596)
HIX0008596
HIT000101110
(
D21863
)
(6-phosphofructokinase, muscle type; EC=2.7.1.11; Phosphofructo-1-kinase isozyme A; PFK-A; Phosphofructokinase-M; Phosphofructokinase 1; Phosphohexokinase;)
genome : 3,154,439 - 3,178,768 (24,330)
query : 1 - 1,238 (1,238/1,238)
12 exons
identity = 0.997
5'(1.000;1.000;0.980;1.000;1.000;1.000;1.000;
1.000;1.000;0.990;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.7.1.11
KEGG pathway :
00010 : Glycolysis / Gluconeogenesis (45)
00030 : Pentose phosphate pathway (39)
00051 : Fructose and mannose metabolism (61)
00052 : Galactose metabolism (37)
00680 : Methane metabolism (75)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
01120 : Microbial metabolism in diverse environments (468)
InterPro :
IPR000023 : Phosphofructokinase domain
IPR015912 : Phosphofructokinase, conserved site
IPR022953 : Phosphofructokinase
GO :
0003872 : Molecular Function : 6-phosphofructokinase activity
0005945 : Cellular Component : 6-phosphofructokinase complex
0006002 : Biological Process : fructose 6-phosphate metabolic process
0006096 : Biological Process : glycolytic process
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14.5, cyto_nucl 10.5, mito 8, nucl 5.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008596)
HIX0008596
HIT000511013 (
ENST00000413079
)
(6-phosphofructokinase type C isoform 2.)
genome : 3,155,650 - 3,172,133 (16,484)
query : 1 - 496 (496/496)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.7.1.11
KEGG pathway :
00010 : Glycolysis / Gluconeogenesis (45)
00030 : Pentose phosphate pathway (39)
00051 : Fructose and mannose metabolism (61)
00052 : Galactose metabolism (37)
00680 : Methane metabolism (75)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
01120 : Microbial metabolism in diverse environments (468)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cysk 24, cyto_nucl 3, nucl 2.5, cyto 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008596)
HIX0008596
HIT000048246
(
AK128373
)
(6-phosphofructokinase type C isoform 2.)
genome : 3,155,687 - 3,178,992 (23,306)
query : 1 - 3,164 (3,164/3,164)
9 exons
identity = 0.997
5'(1.000;0.996;1.000;1.000;1.000;1.000;1.000;
1.000;0.991)3'
coverage = 1.000
EC number :
EC 2.7.1.11
KEGG pathway :
00010 : Glycolysis / Gluconeogenesis (45)
00030 : Pentose phosphate pathway (39)
00051 : Fructose and mannose metabolism (61)
00052 : Galactose metabolism (37)
00680 : Methane metabolism (75)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
01120 : Microbial metabolism in diverse environments (468)
InterPro :
IPR000023 : Phosphofructokinase domain
IPR015912 : Phosphofructokinase, conserved site
IPR022953 : Phosphofructokinase
GO :
0003872 : Molecular Function : 6-phosphofructokinase activity
0005945 : Cellular Component : 6-phosphofructokinase complex
0006002 : Biological Process : fructose 6-phosphate metabolic process
0006096 : Biological Process : glycolytic process
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17.5, cyto_nucl 10, mito 9, pero 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008596)
HIX0008596
HIT000196148
(
M64784
)
(6-phosphofructokinase type C isoform 2.)
genome : 3,160,986 - 3,178,988 (18,003)
query : 8 - 1,123 (1,116/1,138)
8 exons
identity = 0.990
5'(0.961;1.000;1.000;1.000;1.000;0.990;1.000;
0.980)3'
coverage = 0.994
EC number :
EC 2.7.1.11
KEGG pathway :
00010 : Glycolysis / Gluconeogenesis (45)
00030 : Pentose phosphate pathway (39)
00051 : Fructose and mannose metabolism (61)
00052 : Galactose metabolism (37)
00680 : Methane metabolism (75)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
01120 : Microbial metabolism in diverse environments (468)
InterPro :
IPR000023 : Phosphofructokinase domain
IPR015912 : Phosphofructokinase, conserved site
IPR022953 : Phosphofructokinase
GO :
0003872 : Molecular Function : 6-phosphofructokinase activity
0005945 : Cellular Component : 6-phosphofructokinase complex
0006002 : Biological Process : fructose 6-phosphate metabolic process
0006096 : Biological Process : glycolytic process
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 14, extr 8, cyto 7, mito_nucl 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008596)
HIX0035521
HIT000046026
(
AK126153
)
Representative transcript
(Hypothetical protein.)
genome : 3,167,527 - 3,171,210 (3,684)
query : 1 - 3,690 (3,690/3,690)
1 exon
identity = 0.994
3'(0.994)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 9.33333, extr 9, cyto 9, nucl 6.5,
cyto_pero 6, mito_nucl 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0035521)
HIX0008596
HIT000050038
(
AK130767
)
(6-phosphofructokinase, liver type; EC=2.7.1.11; Phosphofructo-1-kinase isozyme B; PFK-B; Phosphofructokinase 1; Phosphohexokinase;)
genome : 3,168,188 - 3,178,991 (10,804)
query : 1 - 1,937 (1,937/1,937)
7 exons
identity = 0.992
5'(0.990;0.994;1.000;1.000;1.000;1.000;0.986)3'
coverage = 1.000
EC number :
EC 2.7.1.11
KEGG pathway :
00010 : Glycolysis / Gluconeogenesis (45)
00030 : Pentose phosphate pathway (39)
00051 : Fructose and mannose metabolism (61)
00052 : Galactose metabolism (37)
00680 : Methane metabolism (75)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
01120 : Microbial metabolism in diverse environments (468)
InterPro :
IPR000023 : Phosphofructokinase domain
IPR015912 : Phosphofructokinase, conserved site
IPR022953 : Phosphofructokinase
GO :
0003872 : Molecular Function : 6-phosphofructokinase activity
0005945 : Cellular Component : 6-phosphofructokinase complex
0006002 : Biological Process : fructose 6-phosphate metabolic process
0006096 : Biological Process : glycolytic process
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 17, cyto 11.5, cyto_nucl 8
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008596)
HIX0008596
HIT000097487
(
BC043156
)
(6-phosphofructokinase type C isoform 2.)
genome : 3,170,563 - 3,178,993 (8,431)
query : 6 - 2,345 (2,340/2,360)
6 exons
identity = 0.991
5'(0.993;0.984;1.000;1.000;1.000;0.974)3'
coverage = 0.998
EC number :
EC 2.7.1.11
KEGG pathway :
00010 : Glycolysis / Gluconeogenesis (45)
00030 : Pentose phosphate pathway (39)
00051 : Fructose and mannose metabolism (61)
00052 : Galactose metabolism (37)
00680 : Methane metabolism (75)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
01120 : Microbial metabolism in diverse environments (468)
InterPro :
IPR000023 : Phosphofructokinase domain
IPR015912 : Phosphofructokinase, conserved site
IPR022953 : Phosphofructokinase
GO :
0003872 : Molecular Function : 6-phosphofructokinase activity
0005945 : Cellular Component : 6-phosphofructokinase complex
0006002 : Biological Process : fructose 6-phosphate metabolic process
0006096 : Biological Process : glycolytic process
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 17, cyto 11.5, cyto_nucl 8
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008596)
HIX0008596
HIT000022546
(
AK097692
)
(6-phosphofructokinase type C isoform 2.)
genome : 3,171,199 - 3,178,985 (7,787)
query : 1 - 1,698 (1,698/1,700)
6 exons
identity = 0.999
5'(0.999;1.000;1.000;1.000;1.000;0.997)3'
coverage = 0.999
EC number :
EC 2.7.1.11
KEGG pathway :
00010 : Glycolysis / Gluconeogenesis (45)
00030 : Pentose phosphate pathway (39)
00051 : Fructose and mannose metabolism (61)
00052 : Galactose metabolism (37)
00680 : Methane metabolism (75)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
01120 : Microbial metabolism in diverse environments (468)
InterPro :
IPR000023 : Phosphofructokinase domain
IPR015912 : Phosphofructokinase, conserved site
IPR022953 : Phosphofructokinase
GO :
0003872 : Molecular Function : 6-phosphofructokinase activity
0005945 : Cellular Component : 6-phosphofructokinase complex
0006002 : Biological Process : fructose 6-phosphate metabolic process
0006096 : Biological Process : glycolytic process
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 13, cyto_nucl 9.5, extr 8, nucl 4, extr_plas 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008596)
HIX0008596
HIT000362350 (
ENST00000381072
)
(6-phosphofructokinase type C isoform 2.)
genome : 3,171,199 - 3,178,985 (7,787)
query : 1 - 1,698 (1,698/1,698)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.7.1.11
KEGG pathway :
00010 : Glycolysis / Gluconeogenesis (45)
00030 : Pentose phosphate pathway (39)
00051 : Fructose and mannose metabolism (61)
00052 : Galactose metabolism (37)
00680 : Methane metabolism (75)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
01120 : Microbial metabolism in diverse environments (468)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 13, cyto_nucl 9.5, extr 8, nucl 4, extr_plas 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008596)
HIX0008597
HIT000057664
(
BX649017
)
(Presequence protease, mitochondrial isoform 1 precursor.)
genome : 3,175,147 - 3,214,974 (39,828)
query : 2 - 8,844 (8,843/8,866)
26 exons
identity = 0.992
3'(0.988;0.993;1.000;1.000;1.000;1.000;0.990;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.991;0.992;0.989;1.000;0.994;1.000;
1.000;0.993;1.000;1.000;0.985)5'
coverage = 1.000
InterPro :
IPR007863 : Peptidase M16, C-terminal domain
IPR011237 : Peptidase M16 domain
IPR011249 : Metalloenzyme, LuxS/M16 peptidase-like
IPR011765 : Peptidase M16, N-terminal
IPR013578 : Peptidase M16C associated
GO :
0003824 : Molecular Function : catalytic activity
0006508 : Biological Process : proteolysis
0046872 : Molecular Function : metal ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 27, nucl 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008597)
HIX0008596
HIT000531127 (
ENST00000433193
)
(6-phosphofructokinase type C isoform 2.)
genome : 3,175,427 - 3,179,904 (4,478)
query : 1 - 453 (453/453)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.7.1.11
KEGG pathway :
00010 : Glycolysis / Gluconeogenesis (45)
00030 : Pentose phosphate pathway (39)
00051 : Fructose and mannose metabolism (61)
00052 : Galactose metabolism (37)
00680 : Methane metabolism (75)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
01120 : Microbial metabolism in diverse environments (468)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19.5, cyto_nucl 15.1667, cyto_plas 11.6667,
nucl 5.5, extr 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008596)
HIX0008597
HIT000306318
(
CR749279
)
(Presequence protease, mitochondrial isoform 2 precursor.)
genome : 3,179,921 - 3,209,182 (29,262)
query : 1 - 5,636 (5,636/5,777)
21 exons
identity = 0.996
3'(0.997;1.000;1.000;1.000;0.996;1.000;0.990;
0.996;0.991;1.000;0.993;1.000;0.982;1.000;
0.989;1.000;0.994;1.000;1.000;0.993;1.000)5'
coverage = 1.000
InterPro :
IPR007863 : Peptidase M16, C-terminal domain
IPR011237 : Peptidase M16 domain
IPR011249 : Metalloenzyme, LuxS/M16 peptidase-like
IPR013578 : Peptidase M16C associated
GO :
0003824 : Molecular Function : catalytic activity
0006508 : Biological Process : proteolysis
0046872 : Molecular Function : metal ion binding
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 14, cyto_mito 10.3333, cyto_nucl 8.33333, pero 6,
mito 5.5, plas 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008597)
HIX0008597
HIT000030176
(
BC001150
)
(Presequence protease, mitochondrial isoform 1 precursor.)
genome : 3,179,921 - 3,206,076 (26,156)
query : 1 - 2,785 (2,785/2,808)
21 exons
identity = 0.998
3'(0.997;1.000;1.000;1.000;1.000;1.000;1.000;
0.990;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.991;1.000;0.989;1.000;0.994)5'
coverage = 1.000
InterPro :
IPR007863 : Peptidase M16, C-terminal domain
IPR011237 : Peptidase M16 domain
IPR011249 : Metalloenzyme, LuxS/M16 peptidase-like
IPR013578 : Peptidase M16C associated
GO :
0003824 : Molecular Function : catalytic activity
0006508 : Biological Process : proteolysis
0046872 : Molecular Function : metal ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18, cyto_nucl 16.5, cyto 13
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008597)
HIX0008597
HIT000205171 (
NM_014889
)
(Presequence protease, mitochondrial; hPreP; EC=3.4.24.-; Pitrilysin metalloproteinase 1; Metalloprotease 1; hMP1; Precursor;)
genome : 3,179,919 - 3,215,033 (35,115)
query : 1 - 3,487 (3,487/3,505)
27 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.4.24.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 26, nucl 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008597)
HIX0008597
HIT000657496 (
NM_001242307
)
(Presequence protease, mitochondrial; hPreP; EC=3.4.24.-; Pitrilysin metalloproteinase 1; Metalloprotease 1; hMP1; Precursor;)
genome : 3,179,919 - 3,215,033 (35,115)
query : 1 - 3,490 (3,490/3,508)
27 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;0.976;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.4.24.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 26, nucl 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008597)
HIX0008597
HIT000032166
(
BC005025
)
(Presequence protease, mitochondrial; hPreP; EC=3.4.24.-; Pitrilysin metalloproteinase 1; Metalloprotease 1; hMP1; Precursor;)
genome : 3,179,919 - 3,214,968 (35,050)
query : 1 - 3,422 (3,422/3,440)
27 exons
identity = 0.997
3'(0.995;1.000;0.993;1.000;1.000;1.000;1.000;
0.990;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.991;1.000;0.989;1.000;0.994;
1.000;1.000;0.993;1.000;1.000;0.983)5'
coverage = 1.000
EC number :
EC 3.4.24.-
InterPro :
IPR007863 : Peptidase M16, C-terminal domain
IPR011237 : Peptidase M16 domain
IPR011249 : Metalloenzyme, LuxS/M16 peptidase-like
IPR011765 : Peptidase M16, N-terminal
IPR013578 : Peptidase M16C associated
GO :
0003824 : Molecular Function : catalytic activity
0006508 : Biological Process : proteolysis
0046872 : Molecular Function : metal ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 27, nucl 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008597)
HIX0008597
HIT000384214
(
AK225084
)
(Presequence protease, mitochondrial; hPreP; EC=3.4.24.-; Pitrilysin metalloproteinase 1; Metalloprotease 1; hMP1; Precursor;)
genome : 3,179,921 - 3,214,971 (35,051)
query : 1 - 3,423 (3,423/3,439)
27 exons
identity = 0.997
3'(0.995;1.000;0.993;1.000;1.000;1.000;1.000;
0.990;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.991;1.000;0.989;1.000;0.994;
1.000;1.000;0.993;1.000;1.000;0.984)5'
coverage = 1.000
EC number :
EC 3.4.24.-
InterPro :
IPR007863 : Peptidase M16, C-terminal domain
IPR011237 : Peptidase M16 domain
IPR011249 : Metalloenzyme, LuxS/M16 peptidase-like
IPR011765 : Peptidase M16, N-terminal
IPR013578 : Peptidase M16C associated
GO :
0003824 : Molecular Function : catalytic activity
0006508 : Biological Process : proteolysis
0046872 : Molecular Function : metal ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 27, nucl 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008597)
HIX0008597
HIT000335215
(
BC095422
)
(Presequence protease, mitochondrial; hPreP; EC=3.4.24.-; Pitrilysin metalloproteinase 1; Metalloprotease 1; hMP1; Precursor;)
genome : 3,179,921 - 3,214,974 (35,054)
query : 1 - 3,426 (3,426/3,441)
27 exons
identity = 0.996
3'(0.992;1.000;1.000;0.984;1.000;1.000;1.000;
0.990;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.991;1.000;0.989;1.000;0.994;
1.000;0.991;0.987;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.4.24.-
InterPro :
IPR007863 : Peptidase M16, C-terminal domain
IPR011237 : Peptidase M16 domain
IPR011249 : Metalloenzyme, LuxS/M16 peptidase-like
IPR011765 : Peptidase M16, N-terminal
IPR013578 : Peptidase M16C associated
GO :
0003824 : Molecular Function : catalytic activity
0006508 : Biological Process : proteolysis
0046872 : Molecular Function : metal ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 27, nucl 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008597)
HIX0008597
HIT000657497 (
NM_001242309
)
(Presequence protease, mitochondrial isoform 3 precursor.)
genome : 3,179,921 - 3,215,033 (35,113)
query : 1 - 3,184 (3,184/3,198)
24 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 22.5, cyto_mito 13.8333, cyto_nucl 4.83333,
nucl 4.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008597)
HIX0008597
HIT000024571
(
AL117409
)
(Presequence protease, mitochondrial isoform 3 precursor.)
genome : 3,179,921 - 3,191,591 (11,671)
query : 1 - 3,238 (3,238/3,252)
9 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.999)5'
coverage = 1.000
InterPro :
IPR011249 : Metalloenzyme, LuxS/M16 peptidase-like
IPR013578 : Peptidase M16C associated
GO :
0003824 : Molecular Function : catalytic activity
0006508 : Biological Process : proteolysis
0046872 : Molecular Function : metal ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21, cyto_nucl 15.5, nucl 6, mito 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008597)
HIX0008597
HIT000098056
(
BC045577
)
(Presequence protease, mitochondrial isoform 2 precursor.)
genome : 3,179,924 - 3,214,908 (34,985)
query : 1 - 3,694 (3,694/3,709)
25 exons
identity = 0.996
3'(0.992;1.000;1.000;0.992;1.000;1.000;0.992;
0.990;1.000;1.000;1.000;1.000;1.000;1.000;
0.991;1.000;0.989;1.000;0.994;1.000;0.991;
0.987;1.000;0.990;0.998)5'
coverage = 1.000
InterPro :
IPR007863 : Peptidase M16, C-terminal domain
IPR011237 : Peptidase M16 domain
IPR011249 : Metalloenzyme, LuxS/M16 peptidase-like
IPR011765 : Peptidase M16, N-terminal
IPR013578 : Peptidase M16C associated
GO :
0003824 : Molecular Function : catalytic activity
0006508 : Biological Process : proteolysis
0046872 : Molecular Function : metal ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18, mito 9, cyto 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008597)
HIX0008597
HIT000569145 (
ENST00000464395
)
(Presequence protease, mitochondrial isoform 3 precursor.)
genome : 3,179,920 - 3,191,591 (11,672)
query : 1 - 3,240 (3,240/3,240)
9 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21, cyto_nucl 15.5, nucl 6, mito 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008597)
HIX0008597
HIT000594067 (
ENST00000490510
)
(Presequence protease, mitochondrial isoform 3 precursor.)
genome : 3,179,920 - 3,180,807 (888)
query : 1 - 778 (778/778)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 13, cyto_nucl 9.5, nucl 8, cyto 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008597)
HIX0008597
HIT000064958
(
AF061243
)
(Presequence protease, mitochondrial; hPreP; EC=3.4.24.-; Pitrilysin metalloproteinase 1; Metalloprotease 1; hMP1; Precursor;)
genome : 3,179,921 - 3,214,977 (35,057)
query : 1 - 3,432 (3,432/3,432)
27 exons
identity = 0.994
3'(0.990;1.000;1.000;0.992;1.000;1.000;1.000;
1.000;1.000;1.000;0.976;0.992;1.000;1.000;
1.000;0.980;0.991;0.992;0.989;1.000;0.994;
1.000;0.991;0.980;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.4.24.-
InterPro :
IPR007863 : Peptidase M16, C-terminal domain
IPR011237 : Peptidase M16 domain
IPR011249 : Metalloenzyme, LuxS/M16 peptidase-like
IPR011765 : Peptidase M16, N-terminal
IPR013578 : Peptidase M16C associated
GO :
0003824 : Molecular Function : catalytic activity
0006508 : Biological Process : proteolysis
0046872 : Molecular Function : metal ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 26, nucl 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008597)
HIX0008597
HIT000362267 (
ENST00000380989
)
(Presequence protease, mitochondrial; hPreP; EC=3.4.24.-; Pitrilysin metalloproteinase 1; Metalloprotease 1; hMP1; Precursor;)
genome : 3,179,922 - 3,215,003 (35,082)
query : 1 - 3,457 (3,457/3,457)
27 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;0.976;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.4.24.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 26, nucl 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008597)
HIX0008597
HIT000004535
(
AK002061
)
Representative transcript
(Presequence protease, mitochondrial; hPreP; EC=3.4.24.-; Pitrilysin metalloproteinase 1; Metalloprotease 1; hMP1; Precursor;)
genome : 3,179,922 - 3,214,999 (35,078)
query : 3 - 3,452 (3,450/3,452)
27 exons
identity = 0.998
3'(0.997;1.000;1.000;1.000;1.000;1.000;1.000;
0.990;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.991;1.000;0.989;1.000;0.994;
1.000;1.000;0.993;1.000;1.000;1.000)5'
coverage = 0.999
EC number :
EC 3.4.24.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 26, nucl 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008597)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AF513714
Danio
sp. (Zebrafish) : BC045351
Pongo
sp. (Orangutan) : CR859590
Canis
sp. (Dog) : ENSCAFT00000008673
Gallus
sp. (Chicken) : ENSGALT00000038567
Monodelphis
sp. (Opossum) : ENSMODT00000008341
Oryzias
sp. (Medaka) : ENSORLT00000007178
Takifugu
sp. (Fugu) : SINFRUT00000171538
Macaca
sp. (Macaque) : XM_001102165
Pan
sp. (Chimpanzee) : XM_001139812
Equus
sp. (Horse) : XM_001917097
Rattus
sp. (Rat) : XM_225517
Bos
sp. (Cow) : XM_590885
HIX0008597
HIT000103862 (
ENST00000224949
)
(Presequence protease, mitochondrial; hPreP; EC=3.4.24.-; Pitrilysin metalloproteinase 1; Metalloprotease 1; hMP1; Precursor;)
genome : 3,179,922 - 3,214,999 (35,078)
query : 1 - 3,450 (3,450/3,450)
27 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.4.24.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 26, nucl 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008597)
HIX0008597
HIT000494088
(
AK299464
)
(Presequence protease, mitochondrial isoform 1 precursor.)
genome : 3,179,922 - 3,214,974 (35,053)
query : 1 - 3,230 (3,230/3,230)
26 exons
identity = 0.995
3'(0.995;1.000;1.000;1.000;1.000;1.000;1.000;
0.990;1.000;1.000;1.000;1.000;1.000;0.993;
1.000;1.000;0.991;1.000;0.989;1.000;0.992;
0.877;0.993;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR007863 : Peptidase M16, C-terminal domain
IPR011237 : Peptidase M16 domain
IPR011249 : Metalloenzyme, LuxS/M16 peptidase-like
IPR013578 : Peptidase M16C associated
GO :
0003824 : Molecular Function : catalytic activity
0006508 : Biological Process : proteolysis
0046872 : Molecular Function : metal ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 26, nucl 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008597)
HIX0008597
HIT000006750
(
AK023476
)
(Presequence protease, mitochondrial isoform 1 precursor.)
genome : 3,179,922 - 3,202,497 (22,576)
query : 1 - 2,599 (2,599/2,599)
20 exons
identity = 0.997
3'(0.995;1.000;1.000;1.000;1.000;0.987;1.000;
0.990;1.000;1.000;1.000;1.000;1.000;0.993;
1.000;1.000;0.991;1.000;0.989;1.000)5'
coverage = 1.000
InterPro :
IPR007863 : Peptidase M16, C-terminal domain
IPR011237 : Peptidase M16 domain
IPR011249 : Metalloenzyme, LuxS/M16 peptidase-like
IPR013578 : Peptidase M16C associated
GO :
0003824 : Molecular Function : catalytic activity
0006508 : Biological Process : proteolysis
0046872 : Molecular Function : metal ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18, nucl 13
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008597)
HIX0008597
HIT000003657
(
AK001183
)
(Presequence protease, mitochondrial isoform 1 precursor.)
genome : 3,179,922 - 3,191,938 (12,017)
query : 1 - 1,670 (1,670/1,670)
12 exons
identity = 0.996
3'(0.990;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;0.984)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17, nucl 8, cysk 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008597)
HIX0008597
HIT000000821
(
AB029027
)
(Presequence protease, mitochondrial isoform 1 precursor.)
genome : 3,179,926 - 3,200,279 (20,354)
query : 1 - 2,209 (2,209/2,209)
17 exons
identity = 0.999
3'(0.997;1.000;1.000;1.000;1.000;1.000;1.000;
0.990;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 24, nucl 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008597)
HIX0008597
HIT000362272 (
ENST00000380994
)
(Presequence protease, mitochondrial isoform 2 precursor.)
genome : 3,179,926 - 3,200,279 (20,354)
query : 1 - 2,579 (2,579/2,579)
16 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20, nucl 9
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008597)
HIX0008597
HIT000498030
(
AK303406
)
(Presequence protease, mitochondrial isoform 3 precursor.)
genome : 3,180,016 - 3,214,974 (34,959)
query : 1 - 3,030 (3,030/3,030)
24 exons
identity = 0.997
3'(0.990;1.000;1.000;1.000;1.000;1.000;1.000;
0.990;1.000;1.000;1.000;1.000;1.000;1.000;
0.991;1.000;0.989;0.992;0.994;1.000;1.000;
0.993;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR007863 : Peptidase M16, C-terminal domain
IPR011237 : Peptidase M16 domain
IPR011249 : Metalloenzyme, LuxS/M16 peptidase-like
IPR011765 : Peptidase M16, N-terminal
IPR013578 : Peptidase M16C associated
GO :
0003824 : Molecular Function : catalytic activity
0006508 : Biological Process : proteolysis
0046872 : Molecular Function : metal ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 23.5, cyto_mito 14.3333, cyto_nucl 4.33333,
cyto 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008597)
HIX0008597
HIT000549038 (
ENST00000451104
)
(Presequence protease, mitochondrial isoform 3 precursor.)
genome : 3,180,016 - 3,214,974 (34,959)
query : 1 - 3,030 (3,030/3,030)
24 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 22.5, cyto_mito 13.8333, cyto_nucl 4.83333,
nucl 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008597)
HIX0008597
HIT000489489
(
AK294865
)
(Presequence protease, mitochondrial isoform 3 precursor.)
genome : 3,180,060 - 3,214,974 (34,915)
query : 1 - 3,259 (3,259/3,259)
27 exons
identity = 0.988
3'(0.988;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;0.992;1.000;1.000;
1.000;1.000;0.991;1.000;0.989;1.000;0.994;
1.000;0.991;0.993;1.000;0.712;1.000)5'
coverage = 1.000
InterPro :
IPR007863 : Peptidase M16, C-terminal domain
IPR011237 : Peptidase M16 domain
IPR011249 : Metalloenzyme, LuxS/M16 peptidase-like
IPR011765 : Peptidase M16, N-terminal
IPR013578 : Peptidase M16C associated
GO :
0003824 : Molecular Function : catalytic activity
0006508 : Biological Process : proteolysis
0046872 : Molecular Function : metal ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 23, cyto_mito 14.3333, cyto_nucl 4.66667,
nucl 4.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008597)
HIX0008597
HIT000340116
(
BC111987
)
(Presequence protease, mitochondrial; hPreP; EC=3.4.24.-; Pitrilysin metalloproteinase 1; Metalloprotease 1; hMP1; Precursor;)
genome : 3,180,191 - 3,214,989 (34,799)
query : 1 - 3,171 (3,171/3,171)
27 exons
identity = 0.998
3'(0.992;1.000;1.000;1.000;1.000;1.000;1.000;
0.990;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.991;1.000;0.989;1.000;0.994;
1.000;1.000;0.993;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.4.24.-
InterPro :
IPR007863 : Peptidase M16, C-terminal domain
IPR011237 : Peptidase M16 domain
IPR011249 : Metalloenzyme, LuxS/M16 peptidase-like
IPR011765 : Peptidase M16, N-terminal
IPR013578 : Peptidase M16C associated
GO :
0003824 : Molecular Function : catalytic activity
0006508 : Biological Process : proteolysis
0046872 : Molecular Function : metal ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 26, nucl 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008597)
HIX0008597
HIT000386822
(
BC113369
)
(Presequence protease, mitochondrial; hPreP; EC=3.4.24.-; Pitrilysin metalloproteinase 1; Metalloprotease 1; hMP1; Precursor;)
genome : 3,180,191 - 3,214,989 (34,799)
query : 1 - 3,171 (3,171/3,171)
27 exons
identity = 0.998
3'(0.992;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.991;1.000;0.989;1.000;0.994;
1.000;1.000;0.993;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.4.24.-
InterPro :
IPR007863 : Peptidase M16, C-terminal domain
IPR011237 : Peptidase M16 domain
IPR011249 : Metalloenzyme, LuxS/M16 peptidase-like
IPR011765 : Peptidase M16, N-terminal
IPR013578 : Peptidase M16C associated
GO :
0003824 : Molecular Function : catalytic activity
0006508 : Biological Process : proteolysis
0046872 : Molecular Function : metal ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 26, nucl 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008597)
HIX0008597
HIT000433983
(
AK315117
)
(Presequence protease, mitochondrial; hPreP; EC=3.4.24.-; Pitrilysin metalloproteinase 1; Metalloprotease 1; hMP1; Precursor;)
genome : 3,180,223 - 3,214,971 (34,749)
query : 1 - 3,121 (3,121/3,121)
27 exons
identity = 0.998
3'(0.968;1.000;1.000;0.992;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;0.992;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.4.24.-
InterPro :
IPR007863 : Peptidase M16, C-terminal domain
IPR011237 : Peptidase M16 domain
IPR011249 : Metalloenzyme, LuxS/M16 peptidase-like
IPR011765 : Peptidase M16, N-terminal
IPR013578 : Peptidase M16C associated
GO :
0003824 : Molecular Function : catalytic activity
0006508 : Biological Process : proteolysis
0046872 : Molecular Function : metal ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 26, nucl 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008597)
HIX0008597
HIT000553305 (
ENST00000455371
)
(Presequence protease, mitochondrial isoform 3 precursor.)
genome : 3,180,883 - 3,186,558 (5,676)
query : 1 - 673 (673/673)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21.5, cyto_nucl 17.5, nucl 6.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008597)
HIX0008597
HIT000549388 (
ENST00000451454
)
(Presequence protease, mitochondrial isoform 2 precursor.)
genome : 3,183,700 - 3,190,247 (6,548)
query : 1 - 875 (875/875)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19.5, cyto_nucl 17, cyto 9.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008597)
HIX0008598
HIT000660224 (
NR_038284
)
(Presequence protease, mitochondrial isoform 1 precursor.)
genome : 3,183,793 - 3,190,821 (7,029)
query : 1 - 4,076 (4,076/4,093)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19, cyto_nucl 15, cyto 7, extr 6
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008598)
HIX0008598
HIT000710049 (
ENST00000598280
)
(Conserved hypothetical protein.)
genome : 3,183,824 - 3,210,164 (26,341)
query : 1 - 601 (601/601)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, nucl 11, cyto 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008598)
HIX0008598
HIT000712788 (
ENST00000601046
)
(Conserved hypothetical protein.)
genome : 3,183,824 - 3,206,441 (22,618)
query : 1 - 541 (541/541)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 12, cyto_nucl 12, cyto 10, extr 5, mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008598)
HIX0008598
HIT000099158
(
BC050332
)
Representative transcript
(Presequence protease, mitochondrial isoform 1 precursor.)
genome : 3,183,864 - 3,190,821 (6,958)
query : 1 - 4,001 (4,001/4,018)
4 exons
identity = 0.997
5'(1.000;0.957;1.000;0.998)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19, cyto_nucl 15, cyto 7, extr 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008598)
HIX0008598
HIT000539311 (
ENST00000441377
)
(Hypothetical short protein.)
genome : 3,183,864 - 3,187,425 (3,562)
query : 1 - 609 (609/609)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 16.5, cyto 16, nucl 11, extr 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008598)
HIX0008598
HIT000528290 (
ENST00000430356
)
(Presequence protease, mitochondrial isoform 1 precursor.)
genome : 3,185,241 - 3,190,814 (5,574)
query : 1 - 3,823 (3,823/3,823)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19, cyto_nucl 15, cyto 7, extr 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008598)
HIX0008598
HIT000022399
(
AK097545
)
(Conserved hypothetical protein.)
genome : 3,185,241 - 3,189,240 (4,000)
query : 1 - 2,245 (2,245/2,246)
3 exons
identity = 0.995
5'(0.900;1.000;0.997)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18.5, cyto_nucl 13.5, cyto 7.5, extr 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008598)
HIX0008597
HIT000522648 (
ENST00000424714
)
(Presequence protease, mitochondrial isoform 3 precursor.)
genome : 3,185,675 - 3,187,901 (2,227)
query : 1 - 482 (482/482)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19.5, cyto_nucl 16, nucl 7.5, extr 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008597)
HIX0008597
HIT000528296 (
ENST00000430362
)
(Presequence protease, mitochondrial isoform 3 precursor.)
genome : 3,193,368 - 3,201,150 (7,783)
query : 1 - 718 (718/718)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 23, extr 3, nucl 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008597)
HIX0008597
HIT000488412
(
AK293788
)
(Presequence protease, mitochondrial isoform 3 precursor.)
genome : 3,201,174 - 3,214,971 (13,798)
query : 1 - 1,031 (1,031/1,031)
10 exons
identity = 0.998
3'(1.000;1.000;1.000;0.994;1.000;1.000;0.993;
1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR007863 : Peptidase M16, C-terminal domain
IPR011237 : Peptidase M16 domain
IPR011249 : Metalloenzyme, LuxS/M16 peptidase-like
GO :
0003824 : Molecular Function : catalytic activity
0046872 : Molecular Function : metal ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cysk 16, nucl 9.5, cyto_nucl 8, cysk_plas 8
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008597)
HIX0008597
HIT000591728 (
ENST00000488065
)
(Presequence protease, mitochondrial isoform 3 precursor.)
genome : 3,205,324 - 3,207,526 (2,203)
query : 1 - 851 (851/851)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14.5, cyto_nucl 11, extr 7, mito 5, nucl 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008597)
HIX0008598
HIT000095874
(
BC039685
)
(Presequence protease, mitochondrial; EC=3.4.24.-; Pitrilysin metalloproteinase 1; Precursor;)
genome : 3,206,390 - 3,208,828 (2,439)
query : 1 - 1,128 (1,128/1,160)
2 exons
identity = 0.975
5'(1.000;0.973)3'
coverage = 0.999
EC number :
EC 3.4.24.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 21, mito 5, nucl 3, cyto_nucl 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008598)
HIX0171072
HIT000543866 (
ENST00000445932
)
(Hypothetical short protein.)
genome : 3,266,008 - 3,269,599 (3,592)
query : 1 - 597 (597/597)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 13, cyto_nucl 10.5, cyto 9.5, nucl 8.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0171072)
HIX0170678
HIT000515083 (
ENST00000417149
)
(Conserved hypothetical protein.)
genome : 3,282,563 - 3,299,402 (16,840)
query : 1 - 390 (390/390)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0170678)
HIX0127296
HIT000429894
(
AK311028
)
Representative transcript
(Conserved hypothetical protein.)
genome : 3,289,464 - 3,291,388 (1,925)
query : 1 - 1,222 (1,222/1,222)
2 exons
identity = 0.998
3'(0.997;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 12, nucl 8, cyto_mito 8, extr 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0127296)
HIX0170944
HIT000534274 (
ENST00000436340
)
(Hypothetical short protein.)
genome : 3,308,195 - 3,309,207 (1,013)
query : 1 - 463 (463/463)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 16, mito 13
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0170944)
HIX0035587
HIT000095033
(
BC037918
)
Representative transcript
(Conserved hypothetical protein.)
genome : 3,360,887 - 3,792,952 (432,066)
query : 3 - 2,046 (2,044/2,062)
3 exons
identity = 0.991
5'(0.994;0.986;0.995)3'
coverage = 0.998
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 21, nucl 10
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0035587)
HIX0170630
HIT000511927 (
ENST00000413993
)
(Hypothetical short protein.)
genome : 3,529,086 - 3,545,030 (15,945)
query : 1 - 832 (832/832)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 12.5, cyto_nucl 12.5, extr 8, mito 6, nucl 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0170630)
HIX0170353
HIT000524745 (
ENST00000426811
)
(Hypothetical short protein.)
genome : 3,574,286 - 3,579,223 (4,938)
query : 1 - 430 (430/430)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 22, nucl 5.5, cyto_nucl 5.5, cyto 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0170353)
HIX0170353
HIT000511691 (
ENST00000413757
)
(Hypothetical short protein.)
genome : 3,577,304 - 3,579,049 (1,746)
query : 1 - 372 (372/372)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, cyto_nucl 6.83333, nucl 5.5, cyto 5, mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0170353)
HIX0209361
eHIT000000123 ( ESTsASS_10_123 )
Representative transcript
(Non-protein coding transcript.)
genome : 3,679,787 - 3,688,566 (8,780)
query : 1 - 474 (474/474)
2 exons
ESTs assembly
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0209361)
ESTs used for assembly :
AI221331
HIX0170728
HIT000519563 (
ENST00000421629
)
(Hypothetical short protein.)
genome : 3,793,259 - 3,805,418 (12,160)
query : 1 - 759 (759/759)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 12.5, mito 12, cyto_nucl 8.5, cyto 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0170728)
HIX0008600
HIT000220229
(
U51869
)
(Krueppel-like factor 6 isoform C.)
genome : 3,795,674 - 3,827,385 (31,712)
query : 173 - 2,561 (2,389/2,647)
3 exons
identity = 0.952
3'(0.672;0.973;0.979)5'
coverage = 0.913
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31.5, cyto_nucl 16.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008600)
HIX0170651
HIT000513292 (
ENST00000415358
)
(Hypothetical short protein.)
genome : 3,810,107 - 3,810,943 (837)
query : 1 - 313 (313/313)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, cyto 8.5, cyto_nucl 6.83333,
cyto_pero 5.16667, mito 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0170651)
HIX0008600
HIT000198295 (
NM_001300
)
(Krueppel-like factor 6; B-cell-derived protein 1; Core promoter element-binding protein; GC-rich sites-binding factor GBF; Proto-oncogene BCD1; Suppressor of tumorigenicity 12 protein; Transcription factor Zf9;)
genome : 3,818,188 - 3,827,473 (9,286)
query : 1 - 4,662 (4,662/4,679)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31.5, cyto_nucl 16.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008600)
HIX0008600
HIT000561850 (
NM_001160124
)
(Krueppel-like factor 6; B-cell-derived protein 1; Core promoter element-binding protein; GC-rich sites-binding factor GBF; Proto-oncogene BCD1; Suppressor of tumorigenicity 12 protein; Transcription factor Zf9;)
genome : 3,818,188 - 3,827,473 (9,286)
query : 1 - 4,536 (4,536/4,553)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008600)
HIX0008600
HIT000561851 (
NM_001160125
)
(Krueppel-like factor 6 isoform C.)
genome : 3,818,188 - 3,827,473 (9,286)
query : 1 - 4,538 (4,538/4,555)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008600)
HIX0008600
HIT000563567 (
NR_027653
)
(Krueppel-like factor 6; B-cell-derived protein 1; Core promoter element-binding protein; GC-rich sites-binding factor GBF; Proto-oncogene BCD1; Suppressor of tumorigenicity 12 protein; Transcription factor Zf9;)
genome : 3,818,188 - 3,827,473 (9,286)
query : 1 - 4,508 (4,508/4,525)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 14.5, cyto_nucl 12.5, cyto 9.5, extr 5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008600)
HIX0008600
HIT000600838 (
ENST00000497571
)
(Krueppel-like factor 6; B-cell-derived protein 1; Core promoter element-binding protein; GC-rich sites-binding factor GBF; Proto-oncogene BCD1; Suppressor of tumorigenicity 12 protein; Transcription factor Zf9;)
genome : 3,818,188 - 3,827,467 (9,280)
query : 1 - 4,656 (4,656/4,656)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31.5, cyto_nucl 16.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008600)
HIX0008600
HIT000566027 (
ENST00000461124
)
(Krueppel-like factor 6; B-cell-derived protein 1; Core promoter element-binding protein; GC-rich sites-binding factor GBF; Proto-oncogene BCD1; Suppressor of tumorigenicity 12 protein; Transcription factor Zf9;)
genome : 3,818,188 - 3,822,409 (4,222)
query : 1 - 764 (764/764)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008600)
HIX0008600
HIT000642002 (
ENST00000542957
)
(Krueppel-like factor 6 isoform C.)
genome : 3,818,189 - 3,827,473 (9,285)
query : 1 - 4,537 (4,537/4,537)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008600)
HIX0008600
HIT000088884
(
BC015987
)
(Hypothetical short protein.)
genome : 3,818,745 - 3,819,109 (365)
query : 4 - 367 (364/396)
1 exon
identity = 0.995
3'(0.995)5'
coverage = 0.992
SOSUI :
SOLUBLE PROTEIN
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008600)
HIX0008600
HIT000031852
(
BC004301
)
(Krueppel-like factor 6; B-cell-derived protein 1; Core promoter element-binding protein; GC-rich sites-binding factor GBF; Proto-oncogene BCD1; Suppressor of tumorigenicity 12 protein; Transcription factor Zf9;)
genome : 3,821,240 - 3,827,390 (6,151)
query : 1 - 1,527 (1,527/1,545)
4 exons
identity = 0.999
3'(0.998;0.992;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30, cyto_nucl 18
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008600)
HIX0008600
HIT000061634
(
AF001461
)
(Krueppel-like factor 6; B-cell-derived protein 1; Core promoter element-binding protein; GC-rich sites-binding factor GBF; Proto-oncogene BCD1; Suppressor of tumorigenicity 12 protein; Transcription factor Zf9;)
genome : 3,821,257 - 3,827,235 (5,979)
query : 2 - 1,355 (1,354/1,383)
4 exons
identity = 0.996
3'(0.989;1.000;1.000;1.000)5'
coverage = 0.999
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008600)
HIX0008600
HIT000054189
(
BX537374
)
(Krueppel-like factor 6; B-cell-derived protein 1; Core promoter element-binding protein; GC-rich sites-binding factor GBF; Proto-oncogene BCD1; Suppressor of tumorigenicity 12 protein; Transcription factor Zf9;)
genome : 3,821,247 - 3,823,727 (2,481)
query : 1 - 1,961 (1,961/1,979)
2 exons
identity = 0.995
3'(0.996;0.995)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29.5, cyto_nucl 16.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008600)
HIX0008600
HIT000029508
(
BC000311
)
Representative transcript
(Krueppel-like factor 6; B-cell-derived protein 1; Core promoter element-binding protein; GC-rich sites-binding factor GBF; Proto-oncogene BCD1; Suppressor of tumorigenicity 12 protein; Transcription factor Zf9;)
genome : 3,821,257 - 3,827,392 (6,136)
query : 1 - 1,512 (1,512/1,536)
4 exons
identity = 0.998
3'(0.996;1.000;1.000;0.997)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31.5, cyto_nucl 16.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008600)
Ortholog candidate ( ->
Evola
)
Macaca
sp. (Macaque) : AB173024
Gallus
sp. (Chicken) : AJ720905
Mus
sp. (Mouse) : AK146615
Rattus
sp. (Rat) : AY318957
Danio
sp. (Zebrafish) : BC048893
Bos
sp. (Cow) : BC107527
Oryzias
sp. (Medaka) : ENSORLT00000007064
Pongo
sp. (Orangutan) : ENSPPYT00000002441
Pan
sp. (Chimpanzee) : ENSPTRT00000004108
Tetraodon
sp. (Tetraodon) : GSTENT00015243001
Takifugu
sp. (Fugu) : SINFRUT00000148136
Takifugu
sp. (Fugu) : SINFRUT00000161652
Monodelphis
sp. (Opossum) : XM_001365715
Equus
sp. (Horse) : XM_001501207
Danio
sp. (Zebrafish) : XM_001920617
Canis
sp. (Dog) : XM_544279
HIX0008600
HIT000102541 (
ENST00000173785
)
(Krueppel-like factor 7;)
genome : 3,821,239 - 3,824,243 (3,005)
query : 1 - 925 (925/925)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008600)
HIX0008600
HIT000219965
(
U44975
)
(Krueppel-like factor 6; B-cell-derived protein 1; Core promoter element-binding protein; GC-rich sites-binding factor GBF; Proto-oncogene BCD1; Suppressor of tumorigenicity 12 protein; Transcription factor Zf9;)
genome : 3,821,262 - 3,827,220 (5,959)
query : 8 - 1,347 (1,340/1,350)
4 exons
identity = 0.993
3'(0.981;1.000;1.000;1.000)5'
coverage = 0.993
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31.5, cyto_nucl 16.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008600)
HIX0008600
HIT000058518
(
AB017493
)
(Krueppel-like factor 6; B-cell-derived protein 1; Core promoter element-binding protein; GC-rich sites-binding factor GBF; Proto-oncogene BCD1; Suppressor of tumorigenicity 12 protein; Transcription factor Zf9;)
genome : 3,821,364 - 3,827,322 (5,959)
query : 2 - 1,340 (1,339/1,340)
4 exons
identity = 0.995
3'(0.983;1.000;1.000;1.000)5'
coverage = 0.999
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31.5, cyto_nucl 16.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008600)
HIX0008600
HIT000646030
(
FJ619623
)
(Krueppel-like factor 6; B-cell-derived protein 1; Core promoter element-binding protein; GC-rich sites-binding factor GBF; Proto-oncogene BCD1; Suppressor of tumorigenicity 12 protein; Transcription factor Zf9;)
genome : 3,821,722 - 3,827,213 (5,492)
query : 1 - 742 (742/742)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008600)
HIX0008600
HIT000434807
(
AK316596
)
(Krueppel-like factor 6; B-cell-derived protein 1; Core promoter element-binding protein; GC-rich sites-binding factor GBF; Proto-oncogene BCD1; Suppressor of tumorigenicity 12 protein; Transcription factor Zf9;)
genome : 3,821,731 - 3,827,401 (5,671)
query : 1 - 1,047 (1,047/1,047)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31.5, cyto_nucl 16.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008600)
HIX0008600
HIT000099698
(
BT006778
)
(Krueppel-like factor 6; B-cell-derived protein 1; Core promoter element-binding protein; GC-rich sites-binding factor GBF; Proto-oncogene BCD1; Suppressor of tumorigenicity 12 protein; Transcription factor Zf9;)
genome : 3,821,733 - 3,827,206 (5,474)
query : 1 - 850 (850/852)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 0.998
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31.5, cyto_nucl 16.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008600)
HIX0008600
HIT000595620 (
ENST00000492125
)
(Krueppel-like factor 6; B-cell-derived protein 1; Core promoter element-binding protein; GC-rich sites-binding factor GBF; Proto-oncogene BCD1; Suppressor of tumorigenicity 12 protein; Transcription factor Zf9;)
genome : 3,821,742 - 3,822,688 (947)
query : 1 - 432 (432/432)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29.5, cyto_nucl 16.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008600)
HIX0008600
HIT000573957 (
ENST00000469435
)
(Krueppel-like factor 6; B-cell-derived protein 1; Core promoter element-binding protein; GC-rich sites-binding factor GBF; Proto-oncogene BCD1; Suppressor of tumorigenicity 12 protein; Transcription factor Zf9;)
genome : 3,822,519 - 3,827,385 (4,867)
query : 1 - 2,169 (2,169/2,169)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008600)
HIX0008600
HIT000487883
(
AK293259
)
(Krueppel-like factor 6; B-cell-derived protein 1; Core promoter element-binding protein; GC-rich sites-binding factor GBF; Proto-oncogene BCD1; Suppressor of tumorigenicity 12 protein; Transcription factor Zf9;)
genome : 3,823,220 - 3,827,407 (4,188)
query : 1 - 1,490 (1,490/1,490)
2 exons
identity = 0.998
3'(0.997;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008600)
HIX0008600
HIT000362224 (
ENST00000380946
)
(Krueppel-like factor 6; B-cell-derived protein 1; Core promoter element-binding protein; GC-rich sites-binding factor GBF; Proto-oncogene BCD1; Suppressor of tumorigenicity 12 protein; Transcription factor Zf9;)
genome : 3,824,000 - 3,827,375 (3,376)
query : 1 - 744 (744/744)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 13, nucl 11, cyto 11, extr 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008600)
HIX0170619
HIT000511273 (
ENST00000413339
)
(Hypothetical short protein.)
genome : 3,876,142 - 3,876,920 (779)
query : 1 - 536 (536/536)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 20, extr 7, nucl 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0170619)
HIX0170405
HIT000530386 (
ENST00000432452
)
(Conserved hypothetical protein.)
genome : 3,976,711 - 3,978,004 (1,294)
query : 1 - 590 (590/590)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 19, mito 12
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0170405)
HIX0171210
HIT000553459 (
ENST00000455525
)
(Hypothetical short protein.)
genome : 4,067,132 - 4,070,586 (3,455)
query : 1 - 633 (633/633)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 16, nucl 14, cyto 10, extr 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0171210)
HIX0018639
HIT000012417
(
AK055803
)
Representative transcript
(Conserved hypothetical protein.)
genome : 4,093,918 - 4,131,205 (37,288)
query : 1 - 2,288 (2,288/2,288)
4 exons
identity = 0.999
3'(1.000;1.000;1.000;0.998)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16, cyto_nucl 13, extr 10, cyto 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0018639)
HIX0018639
HIT000553133 (
ENST00000455199
)
(Conserved hypothetical protein.)
genome : 4,093,918 - 4,131,205 (37,288)
query : 1 - 2,287 (2,287/2,287)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16, cyto_nucl 13, extr 10, cyto 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0018639)
HIX0170367
HIT000552404 (
ENST00000454470
)
(Hypothetical short protein.)
genome : 4,277,752 - 4,285,835 (8,084)
query : 1 - 363 (363/363)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0170367)
HIX0035805
HIT000220335
(
U55055
)
Representative transcript
(Non-protein coding transcript.)
genome : 4,284,540 - 4,284,771 (232)
query : 5 - 236 (232/248)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 0.983
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0035805)
HIX0170367
HIT000516306 (
ENST00000418372
)
(Hypothetical short protein.)
genome : 4,285,142 - 4,285,981 (840)
query : 1 - 446 (446/446)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 21, cyto 9.5, cyto_nucl 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0170367)
HIX0209369
eHIT000000298 ( ESTsASS_10_298 )
Representative transcript
(Non-protein coding transcript.)
genome : 4,376,600 - 4,379,012 (2,413)
query : 1 - 544 (544/544)
2 exons
ESTs assembly
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0209369)
ESTs used for assembly :
DB339340
HIX0008602
HIT000020554
(
AK095699
)
Representative transcript
(Conserved hypothetical protein.)
genome : 4,426,438 - 4,452,804 (26,367)
query : 1 - 2,390 (2,390/2,390)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, nucl 11, cyto 6, mito_nucl 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008602)
Ortholog candidate ( ->
Evola
)
Macaca
sp. (Macaque) : XM_001103062
Pan
sp. (Chimpanzee) : XM_001141613
HIX0008602
HIT000552086 (
ENST00000454152
)
(Hypothetical short protein.)
genome : 4,426,438 - 4,452,804 (26,367)
query : 1 - 2,390 (2,390/2,390)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, nucl 11, cyto 6, mito_nucl 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008602)
HIX0008602
HIT000532836 (
ENST00000434902
)
(Hypothetical short protein.)
genome : 4,448,694 - 4,451,443 (2,750)
query : 1 - 869 (869/869)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, cyto_nucl 11.5, nucl 10.5, cyto 7.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008602)
HIX0170710
HIT000518016 (
ENST00000420082
)
(Conserved hypothetical protein.)
genome : 4,457,497 - 4,468,371 (10,875)
query : 1 - 691 (691/691)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
plas 19, extr_plas 13.5, extr 6, cyto 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0170710)
HIX0209361
eHIT000000123 ( ESTsASS_10_123 )
Representative transcript
(Non-protein coding transcript.)
genome : 3,679,787 - 3,688,566 (8,780)
query : 1 - 474 (474/474)
2 exons
ESTs assembly
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0209361)
ESTs used for assembly :
AI221331
HIX0209369
eHIT000000298 ( ESTsASS_10_298 )
Representative transcript
(Non-protein coding transcript.)
genome : 4,376,600 - 4,379,012 (2,413)
query : 1 - 544 (544/544)
2 exons
ESTs assembly
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0209369)
ESTs used for assembly :
DB339340
AC026396.8
3000001-3007961 F -
NCBI
AL590671.13
3007962-3047537 F +
NCBI
AL731533.8
3047538-3143935 F +
NCBI
AL451164.13
3143936-3303007 F +
NCBI
AL139280.8
3303008-3346469 F +
NCBI
AL356433.19
3346470-3506279 F +
NCBI
AL357833.16
3506280-3682842 F +
NCBI
AL607063.14
3682843-3734437 F +
NCBI
AL450322.17
3734438-3826599 F +
NCBI
AL513303.11
3826600-4012432 F +
NCBI
AL139816.16
4012433-4037763 F +
NCBI
AC025822.7
4037764-4257794 F -
NCBI
AL133552.8
4257795-4338649 F +
NCBI
AL157889.11
4338650-4427149 F +
NCBI
AC022535.6
4427150-4600000 F -
NCBI