bases per tick :
500
200
100
50
20
10
5
2
kb first site :
main :
All Human Genes
JIGSAW prediction
ESTs assembly
homology :
UCSC
CCDS
Pseudogene.org
Conserved regions (
Segmental duplication
P.troglodytes
P.abelii
M.mulatta
M.musculus
R.norvegicus
C.familiaris
E.caballus
B.taurus
M.domestica
G.gallus
D.rerio
O.latipes
T.nigroviridis
T.rubripes
)
gene prediction :
FGENESH
GenScan
HMMgene
tRNA
show... :
SNPs
ESTs(summary)
ESTs(detail)
CAGE tag(summary)
CAGE tag(detail)
sequence viewer :
( start, end )
( middle, total length )
= (
,
)
HIX0218866
HIT000350058 (
ENST00000368778
)
(Tetrapyrrole biosynthesis, uroporphyrinogen III synthase domain containing protein.)
genome : 127,490,626 - 127,511,765 (21,140)
query : 1 - 1,556 (1,556/1,556)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18.5, cyto_nucl 17.5, nucl 9.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0218866)
HIX0218866
HIT000350054 (
ENST00000368774
)
(Tetrapyrrole biosynthesis, uroporphyrinogen III synthase domain containing protein.)
genome : 127,495,719 - 127,511,658 (15,940)
query : 1 - 744 (744/744)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 15.5, cyto 15, nucl 10, extr 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0218866)
HIX0218946
HIT000694742 (
ENST00000582855
)
(Non-protein coding transcript.)
genome : 127,508,309 - 127,508,391 (83)
query : 1 - 83 (83/83)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0218946)
HIX0218946
HIT000725767 (
NR_039704
)
(Non-protein coding transcript.)
genome : 127,508,309 - 127,508,391 (83)
query : 1 - 83 (83/83)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0218946)
HIX0009295
pHIT000018379 ( pHIT000018379 )
(Conserved hypothetical protein.)
genome : 127,511,982 - 127,524,843 (12,862)
query : 1 - 792 (792/792)
6 exons
InterPro :
IPR025602 : BCP1 family
SOSUI :
SOLUBLE PROTEIN
JIGSAW prediction
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009295)
CAGE tag :
H05BB85D0509
HIX0009295
HIT000206238 (
NM_016567
)
(BCP1 family protein.)
genome : 127,512,104 - 127,542,264 (30,161)
query : 1 - 1,444 (1,444/1,461)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 28, cyto 2, mito 2, cyto_mito 2
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009295)
HIX0009295
HIT000084137
(
AY064248
)
Representative transcript
(BRCA2 and CDKN1A-interacting protein isoform BCCIPalpha.)
genome : 127,512,104 - 127,542,149 (30,046)
query : 1 - 1,329 (1,329/1,329)
8 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.998)3'
coverage = 1.000
InterPro :
IPR025602 : BCP1 family
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 28, cyto 2, mito 2, cyto_mito 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009295)
HIX0009295
HIT000211742 (
NM_078469
)
(BCP1 family protein.)
genome : 127,512,104 - 127,531,376 (19,273)
query : 1 - 2,350 (2,350/2,373)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19, cyto 12
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009295)
HIX0009295
HIT000211741 (
NM_078468
)
(BCP1 family protein.)
genome : 127,512,104 - 127,525,124 (13,021)
query : 1 - 1,249 (1,249/1,261)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 21, cyto 9
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009295)
HIX0009295
HIT000084138
(
AY064249
)
(BRCA2 and CDKN1A-interacting protein; P21- and CDK-associated protein 1; Protein TOK-1;)
genome : 127,512,104 - 127,525,120 (13,017)
query : 1 - 1,245 (1,245/1,245)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR025602 : BCP1 family
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 21, cyto 9
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009295)
HIX0009295
HIT000034562
(
BC009771
)
(BRCA2 and CDKN1A-interacting protein; P21- and CDK-associated protein 1; Protein TOK-1;)
genome : 127,512,115 - 127,525,122 (13,008)
query : 5 - 1,240 (1,236/1,272)
7 exons
identity = 0.998
5'(1.000;1.000;1.000;1.000;1.000;0.994;0.998)3'
coverage = 0.994
InterPro :
IPR025602 : BCP1 family
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 21, cyto 9
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009295)
HIX0009295
HIT000350039 (
ENST00000368759
)
(BCP1 family protein.)
genome : 127,512,115 - 127,542,264 (30,150)
query : 1 - 1,433 (1,433/1,433)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 28, cyto 2, mito 2, cyto_mito 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009295)
HIX0009295
HIT000059278
(
AB040450
)
(BRCA2 and CDKN1A-interacting protein isoform BCCIPalpha.)
genome : 127,512,115 - 127,542,090 (29,976)
query : 1 - 1,259 (1,259/1,290)
8 exons
identity = 0.992
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.975)3'
coverage = 0.998
InterPro :
IPR025602 : BCP1 family
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 28, cyto 2, mito 2, cyto_mito 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009295)
HIX0009295
HIT000012305
(
AK055691
)
(BRCA2 and CDKN1A-interacting protein isoform C.)
genome : 127,512,115 - 127,531,375 (19,261)
query : 1 - 2,339 (2,339/2,339)
7 exons
identity = 0.998
5'(1.000;0.987;1.000;1.000;0.995;1.000;0.999)3'
coverage = 1.000
InterPro :
IPR025602 : BCP1 family
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19, cyto 12
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009295)
HIX0009295
HIT000115257 (
ENST00000299130
)
(BCP1 family protein.)
genome : 127,512,115 - 127,531,375 (19,261)
query : 1 - 2,338 (2,338/2,338)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19, cyto 12
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009295)
HIX0009295
HIT000499153
(
AK304529
)
(BRCA2 and CDKN1A-interacting protein isoform C.)
genome : 127,512,115 - 127,530,506 (18,392)
query : 1 - 1,379 (1,379/1,379)
6 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;0.999)3'
coverage = 1.000
InterPro :
IPR025602 : BCP1 family
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17, cyto 14
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009295)
HIX0009295
HIT000527797 (
ENST00000429863
)
(BCP1 family protein.)
genome : 127,512,115 - 127,530,506 (18,392)
query : 1 - 1,379 (1,379/1,379)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17, cyto 14
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009295)
HIX0009295
HIT000111676 (
ENST00000278100
)
(BCP1 family protein.)
genome : 127,512,115 - 127,525,122 (13,008)
query : 1 - 1,236 (1,236/1,236)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 21, cyto 9
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009295)
HIX0009295
HIT000059279
(
AB040451
)
(BRCA2 and CDKN1A-interacting protein; P21- and CDK-associated protein 1; Protein TOK-1;)
genome : 127,512,115 - 127,524,843 (12,729)
query : 1 - 957 (957/957)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR025602 : BCP1 family
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 21, cyto 9
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009295)
HIX0009295
HIT000495391
(
AK300767
)
(BRCA2 and CDKN1A-interacting protein; P21- and CDK-associated protein 1; Protein TOK-1;)
genome : 127,512,124 - 127,530,049 (17,926)
query : 1 - 997 (997/997)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR025602 : BCP1 family
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19, cyto 12
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009295)
HIX0009295
HIT000029188
(
AL834458
)
(BRCA2 and CDKN1A-interacting protein isoform C.)
genome : 127,512,126 - 127,531,374 (19,249)
query : 1 - 2,326 (2,326/2,344)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;0.999)3'
coverage = 1.000
InterPro :
IPR025602 : BCP1 family
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19, cyto 12
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009295)
HIX0009295
HIT000084357
(
AY092061
)
(BRCA2 and CDKN1A-interacting protein; P21- and CDK-associated protein 1; Protein TOK-1;)
genome : 127,512,142 - 127,523,218 (11,077)
query : 10 - 1,476 (1,467/1,493)
6 exons
identity = 0.993
5'(1.000;1.000;0.988;1.000;1.000;0.989)3'
coverage = 0.999
InterPro :
IPR025602 : BCP1 family
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22, nucl 4, extr 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009295)
HIX0009295
HIT000568129 (
ENST00000463330
)
(BCP1 family protein.)
genome : 127,512,179 - 127,520,219 (8,041)
query : 1 - 500 (500/500)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17, cyto_nucl 14.5, nucl 8, extr 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009295)
HIX0009295
HIT000582889 (
ENST00000478798
)
(BCP1 family protein.)
genome : 127,514,063 - 127,520,106 (6,044)
query : 1 - 1,461 (1,461/1,461)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14, extr 12, nucl 2, lyso 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009295)
HIX0009296
HIT000030920
(
BC002473
)
(Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX32; EC=3.6.4.13; DEAD/H box 32; DEAD/H helicase-like protein 1; DHLP1; DEAH box protein 32; HuDDX32;)
genome : 127,524,908 - 127,569,420 (44,513)
query : 1 - 2,607 (2,607/2,673)
11 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.6.4.13
InterPro :
IPR007502 : Helicase-associated domain
IPR011709 : Domain of unknown function DUF1605
IPR014001 : Helicase superfamily 1/2, ATP-binding domain
GO :
0004386 : Molecular Function : helicase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16.5, cyto_nucl 16.5, nucl 13.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009296)
HIX0009296
HIT000026221
(
AL162051
)
(Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX32; EC=3.6.4.13; DEAD/H box 32; DEAD/H helicase-like protein 1; DHLP1; DEAH box protein 32; HuDDX32;)
genome : 127,524,908 - 127,548,309 (23,402)
query : 1 - 1,869 (1,869/1,882)
9 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.6.4.13
InterPro :
IPR007502 : Helicase-associated domain
IPR011709 : Domain of unknown function DUF1605
GO :
0004386 : Molecular Function : helicase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
cysk 12, cyto 9, mito 5, cyto_pero 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009296)
HIX0009296
HIT000095040
(
BC037925
)
(Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX32; EC=3.6.4.13; DEAD/H box 32; DEAD/H helicase-like protein 1; DHLP1; DEAH box protein 32; HuDDX32;)
genome : 127,524,908 - 127,543,428 (18,521)
query : 5 - 2,390 (2,386/2,403)
8 exons
identity = 0.998
3'(1.000;1.000;0.995;1.000;0.995;0.994;1.000;
0.999)5'
coverage = 0.998
EC number :
EC 3.6.4.13
InterPro :
IPR007502 : Helicase-associated domain
IPR011709 : Domain of unknown function DUF1605
GO :
0004386 : Molecular Function : helicase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 13, cysk 7, nucl 5, mito 3, lyso 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009296)
HIX0009296
HIT000350001 (
ENST00000368721
)
(Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX32; EC=3.6.4.13; DEAD/H box 32; DEAD/H helicase-like protein 1; DHLP1; DEAH box protein 32; HuDDX32;)
genome : 127,524,906 - 127,543,428 (18,523)
query : 1 - 2,389 (2,389/2,389)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
EC number :
EC 3.6.4.13
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 12, cysk 8, nucl 5, mito 3, lyso 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009296)
HIX0009296
HIT000079491
(
AF427340
)
(Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX32; EC=3.6.4.13; DEAD/H box 32; DEAD/H helicase-like protein 1; DHLP1; DEAH box protein 32; HuDDX32;)
genome : 127,524,909 - 127,569,884 (44,976)
query : 2 - 3,071 (3,070/3,071)
11 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.6.4.13
InterPro :
IPR007502 : Helicase-associated domain
IPR011709 : Domain of unknown function DUF1605
IPR014001 : Helicase superfamily 1/2, ATP-binding domain
GO :
0004386 : Molecular Function : helicase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16.5, cyto_nucl 16.5, nucl 13.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009296)
HIX0009296
HIT000112521 (
ENST00000284688
)
(Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX32; EC=3.6.4.13; DEAD/H box 32; DEAD/H helicase-like protein 1; DHLP1; DEAH box protein 32; HuDDX32;)
genome : 127,524,909 - 127,569,884 (44,976)
query : 1 - 2,827 (2,827/2,827)
10 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.6.4.13
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17.5, cyto_nucl 16.5, nucl 12.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009296)
HIX0009296
HIT000112522 (
ENST00000284690
)
(Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX32; EC=3.6.4.13; DEAD/H box 32; DEAD/H helicase-like protein 1; DHLP1; DEAH box protein 32; HuDDX32;)
genome : 127,524,909 - 127,569,884 (44,976)
query : 1 - 3,070 (3,070/3,070)
11 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.6.4.13
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16.5, cyto_nucl 16.5, nucl 13.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009296)
HIX0009296
HIT000207010 (
NM_018180
)
(Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX32; EC=3.6.4.13; DEAD/H box 32; DEAD/H helicase-like protein 1; DHLP1; DEAH box protein 32; HuDDX32;)
genome : 127,524,909 - 127,569,884 (44,976)
query : 1 - 3,070 (3,070/3,070)
11 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.6.4.13
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16.5, cyto_nucl 16.5, nucl 13.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009296)
HIX0009296
HIT000004225
(
AK001751
)
(Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX32; EC=3.6.4.13; DEAD/H box 32; DEAD/H helicase-like protein 1; DHLP1; DEAH box protein 32; HuDDX32;)
genome : 127,524,909 - 127,569,852 (44,944)
query : 6 - 3,043 (3,038/3,043)
11 exons
identity = 0.997
3'(0.998;0.995;1.000;1.000;0.979;1.000;1.000;
1.000;0.997;0.995;1.000)5'
coverage = 0.998
EC number :
EC 3.6.4.13
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17.5, cyto_nucl 16.5, nucl 12.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009296)
HIX0009296
HIT000084139
(
AY064250
)
(Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX32; EC=3.6.4.13; DEAD/H box 32; DEAD/H helicase-like protein 1; DHLP1; DEAH box protein 32; HuDDX32;)
genome : 127,524,909 - 127,569,852 (44,944)
query : 1 - 3,038 (3,038/3,038)
11 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.6.4.13
InterPro :
IPR007502 : Helicase-associated domain
IPR011709 : Domain of unknown function DUF1605
IPR014001 : Helicase superfamily 1/2, ATP-binding domain
GO :
0004386 : Molecular Function : helicase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16.5, cyto_nucl 16.5, nucl 13.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009296)
HIX0009296
HIT000004030
(
AK001556
)
(Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX32; EC=3.6.4.13; DEAD/H box 32; DEAD/H helicase-like protein 1; DHLP1; DEAH box protein 32; HuDDX32;)
genome : 127,524,909 - 127,569,678 (44,770)
query : 1 - 2,864 (2,864/2,864)
11 exons
identity = 0.999
3'(0.998;1.000;1.000;1.000;0.995;1.000;1.000;
1.000;0.997;1.000;0.998)5'
coverage = 1.000
EC number :
EC 3.6.4.13
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 16.5, cyto 15.5, nucl 14.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009296)
HIX0009296
HIT000008143
(
AK024869
)
(Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX32; EC=3.6.4.13; DEAD/H box 32; DEAD/H helicase-like protein 1; DHLP1; DEAH box protein 32; HuDDX32;)
genome : 127,525,091 - 127,548,327 (23,237)
query : 1 - 1,704 (1,704/1,733)
9 exons
identity = 0.999
3'(1.000;1.000;0.995;1.000;0.995;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.6.4.13
InterPro :
IPR007502 : Helicase-associated domain
IPR011709 : Domain of unknown function DUF1605
GO :
0004386 : Molecular Function : helicase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17, cyto_nucl 13.5, nucl 8, E.R. 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009296)
HIX0009296
HIT000263028
(
BC068471
)
Representative transcript
(Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX32; EC=3.6.4.13; DEAD/H box 32; DEAD/H helicase-like protein 1; DHLP1; DEAH box protein 32; HuDDX32;)
genome : 127,525,093 - 127,585,027 (59,935)
query : 1 - 2,882 (2,882/2,898)
12 exons
identity = 0.999
3'(0.997;1.000;1.000;1.000;0.995;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.6.4.13
InterPro :
IPR007502 : Helicase-associated domain
IPR011709 : Domain of unknown function DUF1605
IPR014001 : Helicase superfamily 1/2, ATP-binding domain
GO :
0004386 : Molecular Function : helicase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16.5, cyto_nucl 16.5, nucl 13.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009296)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK028910
Bos
sp. (Cow) : BC151578
Canis
sp. (Dog) : ENSCAFT00000020520
Equus
sp. (Horse) : ENSECAT00000015297
Gallus
sp. (Chicken) : ENSGALT00000023318
Monodelphis
sp. (Opossum) : ENSMODT00000013372
Oryzias
sp. (Medaka) : ENSORLT00000007198
Oryzias
sp. (Medaka) : ENSORLT00000012283
Pongo
sp. (Orangutan) : ENSPPYT00000003325
Rattus
sp. (Rat) : ENSRNOT00000024655
Tetraodon
sp. (Tetraodon) : GSTENT00019634001
Tetraodon
sp. (Tetraodon) : GSTENT00024969001
Takifugu
sp. (Fugu) : SINFRUT00000131204
Takifugu
sp. (Fugu) : SINFRUT00000160835
Macaca
sp. (Macaque) : XM_001085971
Pan
sp. (Chimpanzee) : XM_001138845
Danio
sp. (Zebrafish) : XM_001340992
Gallus
sp. (Chicken) : XM_427757
Danio
sp. (Zebrafish) : XM_682226
HIX0009296
HIT000434296
(
AK315430
)
(Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX32; EC=3.6.4.13; DEAD/H box 32; DEAD/H helicase-like protein 1; DHLP1; DEAH box protein 32; HuDDX32;)
genome : 127,525,256 - 127,569,499 (44,244)
query : 1 - 2,338 (2,338/2,338)
11 exons
identity = 0.999
3'(1.000;1.000;1.000;0.993;0.995;1.000;1.000;
1.000;0.997;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.6.4.13
InterPro :
IPR007502 : Helicase-associated domain
IPR011709 : Domain of unknown function DUF1605
GO :
0004386 : Molecular Function : helicase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17.5, cyto_nucl 16.5, nucl 12.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009296)
HIX0009296
HIT000016921
(
AK092054
)
(Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX32; EC=3.6.4.13; DEAD/H box 32; DEAD/H helicase-like protein 1; DHLP1; DEAH box protein 32; HuDDX32;)
genome : 127,528,576 - 127,531,375 (2,800)
query : 1 - 2,800 (2,800/2,800)
1 exon
identity = 0.999
3'(0.999)5'
coverage = 1.000
EC number :
EC 3.6.4.13
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 20, nucl 8, cyto_nucl 8, cyto 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009296)
HIX0009296
HIT000079492
(
AF427341
)
(Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX32; EC=3.6.4.13; DEAD/H box 32; DEAD/H helicase-like protein 1; DHLP1; DEAH box protein 32; HuDDX32;)
genome : 127,540,972 - 127,548,328 (7,357)
query : 7 - 312 (306/312)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 0.981
EC number :
EC 3.6.4.13
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20.5, cyto_nucl 11, extr 4, mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009296)
HIX0009296
HIT000513666 (
ENST00000415732
)
(Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX32; EC=3.6.4.13; DEAD/H box 32; DEAD/H helicase-like protein 1; DHLP1; DEAH box protein 32; HuDDX32;)
genome : 127,555,698 - 127,585,005 (29,308)
query : 1 - 803 (803/803)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.6.4.13
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 21, cyto 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009296)
HIX0170578
HIT000508685_01 (
ENST00000410697
)
(Non-protein coding transcript.)
genome : 127,579,135 - 127,579,247 (113)
query : 1 - 113 (113/113)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0170578)
HIX0170578
HIT000557280_03 (
ENST00000459346
)
(Non-protein coding transcript.)
genome : 127,579,135 - 127,579,247 (113)
query : 1 - 113 (113/113)
1 exon
identity = 0.991
3'(0.991)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0170578)
HIX0170578
HIT000557463_03 (
ENST00000459529
)
(Non-protein coding transcript.)
genome : 127,579,135 - 127,579,247 (113)
query : 1 - 113 (113/113)
1 exon
identity = 0.991
3'(0.991)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0170578)
HIX0009297
HIT000039759
(
BC024189
)
(Fibronectin type 3 and ankyrin repeat domains protein 1;)
genome : 127,585,108 - 127,698,160 (113,053)
query : 1 - 1,295 (1,295/1,395)
11 exons
identity = 0.998
5'(0.991;0.994;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR002110 : Ankyrin repeat
IPR003961 : Fibronectin type III
IPR020683 : Ankyrin repeat-containing domain
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16, cyto_nucl 15.5, cyto 13
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009297)
HIX0009297
HIT000213141 (
NM_145235
)
(Fibronectin type 3 and ankyrin repeat domains protein 1;)
genome : 127,585,108 - 127,698,160 (113,053)
query : 1 - 1,295 (1,295/1,395)
11 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 15.5, cyto_nucl 13, cyto 9.5, mito 6
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009297)
HIX0009297
HIT000349975 (
ENST00000368695
)
(Fibronectin type 3 and ankyrin repeat domains protein 1;)
genome : 127,585,108 - 127,698,161 (113,054)
query : 1 - 1,296 (1,296/1,296)
11 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 15.5, cyto_nucl 13, cyto 9.5, mito 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009297)
HIX0009297
HIT000349973 (
ENST00000368693
)
(Fibronectin type 3 and ankyrin repeat domains protein 1;)
genome : 127,585,108 - 127,698,159 (113,052)
query : 1 - 1,294 (1,294/1,294)
11 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 15.5, cyto_nucl 13, cyto 9.5, mito 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009297)
HIX0009297
HIT000306110
(
CR627249
)
(Fibronectin type 3 and ankyrin repeat domains 1 protein; Germ cell-specific gene 1 protein; GSG1;)
genome : 127,585,125 - 127,698,160 (113,036)
query : 2 - 7,886 (7,885/8,002)
8 exons
identity = 0.998
5'(1.000;0.994;0.998;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
InterPro :
IPR002110 : Ankyrin repeat
IPR020683 : Ankyrin repeat-containing domain
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 13.5, cyto_nucl 13.5, cyto 12.5, extr 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009297)
HIX0009297
HIT000252199
(
AY358154
)
Representative transcript
(Fibronectin type 3 and ankyrin repeat domains protein 1;)
genome : 127,585,130 - 127,698,160 (113,031)
query : 1 - 1,351 (1,351/1,373)
12 exons
identity = 0.998
5'(1.000;1.000;1.000;0.976;0.987;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR002110 : Ankyrin repeat
IPR003961 : Fibronectin type III
IPR020683 : Ankyrin repeat-containing domain
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17, cyto_nucl 13, cyto 7, mito 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009297)
Ortholog candidate ( ->
Evola
)
Macaca
sp. (Macaque) : AB179439
Mus
sp. (Mouse) : AY819025
Rattus
sp. (Rat) : BC082095
Bos
sp. (Cow) : BC109735
Canis
sp. (Dog) : ENSCAFT00000038271
Pongo
sp. (Orangutan) : ENSPPYT00000003326
Pan
sp. (Chimpanzee) : ENSPTRT00000057250
Monodelphis
sp. (Opossum) : XM_001367757
Equus
sp. (Horse) : XM_001490071
HIX0009297
HIT000499031
(
AK304407
)
(Fibronectin type 3 and ankyrin repeat domains protein 1.)
genome : 127,585,180 - 127,678,056 (92,877)
query : 1 - 1,283 (1,283/1,283)
4 exons
identity = 0.999
5'(1.000;0.992;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR003961 : Fibronectin type III
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 13, nucl 12.5, cyto 8.5, extr 8
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009297)
HIX0009297
HIT000546976 (
ENST00000449042
)
(Fibronectin type 3 and ankyrin repeat domains protein 1.)
genome : 127,585,180 - 127,678,056 (92,877)
query : 1 - 1,283 (1,283/1,283)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 13, nucl 12.5, cyto 8.5, extr 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009297)
HIX0035455
HIT000066968
(
AF086089
)
Representative transcript
(Hypothetical short protein.)
genome : 127,598,277 - 127,598,781 (505)
query : 1 - 505 (505/514)
1 exon
identity = 0.996
3'(0.996)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0035455)
HIX0095726
HIT000393275
(
DQ786222
)
Representative transcript
(Conserved hypothetical protein.)
genome : 127,605,431 - 127,606,024 (594)
query : 14 - 600 (587/619)
1 exon
identity = 0.982
5'(0.982)3'
coverage = 0.948
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 28, nucl 2, golg 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0095726)
HIX0171167
HIT000550223 (
ENST00000452289
)
(Conserved hypothetical protein.)
genome : 127,648,777 - 127,648,975 (199)
query : 1 - 199 (199/199)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, mito 12.5, cyto_mito 8.16667,
cyto_pero 2.83333
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0171167)
HIX0171065
HIT000727841 (
NR_102707
)
(Hypothetical short protein.)
genome : 127,660,757 - 127,661,695 (939)
query : 19 - 446 (428/446)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 0.960
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 29
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0171065)
HIX0171065
HIT000543392 (
ENST00000445458
)
(Hypothetical short protein.)
genome : 127,660,757 - 127,661,695 (939)
query : 1 - 428 (428/428)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 29
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0171065)
HIX0009297
HIT000515048 (
ENST00000417114
)
(Fibronectin type 3 and ankyrin repeat domains protein 1.)
genome : 127,661,942 - 127,684,058 (22,117)
query : 1 - 499 (499/499)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 19.5, cyto 15.5, nucl 14.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009297)
HIX0009297
HIT000598281 (
ENST00000494896
)
(Fibronectin type 3 and ankyrin repeat domains protein 1.)
genome : 127,661,999 - 127,669,465 (7,467)
query : 1 - 802 (802/802)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 16.1667, cyto 16, nucl 10, cyto_plas 10
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009297)
HIX0009297
HIT000543444 (
ENST00000445510
)
(Fibronectin type 3 and ankyrin repeat domains protein 1.)
genome : 127,662,068 - 127,684,067 (22,000)
query : 1 - 672 (672/672)
4 exons
identity = 0.984
5'(1.000;1.000;0.950;0.953)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 19.5, nucl 17, cyto 12
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009297)
HIX0009297
HIT000349971 (
ENST00000368691
)
(Fibronectin type 3 and ankyrin repeat domains protein 1.)
genome : 127,662,084 - 127,698,023 (35,940)
query : 1 - 949 (949/949)
8 exons
identity = 0.988
5'(1.000;1.000;0.950;0.953;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 16, nucl 14.5, cyto 14.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009297)
HIX0009297
HIT000349969 (
ENST00000368689
)
(Fibronectin type 3 and ankyrin repeat domains protein 1.)
genome : 127,663,464 - 127,684,127 (20,664)
query : 1 - 522 (522/522)
4 exons
identity = 0.979
5'(1.000;1.000;0.950;0.973)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 13, cyto_nucl 11.5, nucl 6, mito 6, extr 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009297)
HIX0009297
HIT000251204
(
AY251163
)
(Fibronectin type 3 and ankyrin repeat domains protein 1.)
genome : 127,668,732 - 127,698,078 (29,347)
query : 20 - 1,220 (1,201/1,220)
9 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.997)3'
coverage = 0.984
InterPro :
IPR002110 : Ankyrin repeat
IPR003961 : Fibronectin type III
IPR020683 : Ankyrin repeat-containing domain
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17, cyto_nucl 15.5, nucl 8, pero 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009297)
HIX0009297
HIT000596144 (
ENST00000492670
)
(Fibronectin type 3 and ankyrin repeat domains protein 1.)
genome : 127,677,120 - 127,698,161 (21,042)
query : 1 - 1,107 (1,107/1,107)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, cyto_nucl 11.5, extr 5, nucl 5, mito 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009297)
HIX0009297
HIT000554876 (
ENST00000456942
)
(Fibronectin type 3 and ankyrin repeat domains protein 1.)
genome : 127,683,986 - 127,698,161 (14,176)
query : 1 - 753 (753/753)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 14, cyto 9, extr 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009297)
HIX0009297
HIT000568895 (
ENST00000464130
)
(Fibronectin type 3 and ankyrin repeat domains protein 1.)
genome : 127,684,008 - 127,698,161 (14,154)
query : 1 - 1,119 (1,119/1,119)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 24, cyto 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009297)
HIX0009297
HIT000004711
(
AK021437
)
(Fibronectin type 3 and ankyrin repeat domains protein 1.)
genome : 127,692,717 - 127,698,159 (5,443)
query : 3 - 1,583 (1,581/1,583)
3 exons
identity = 0.996
5'(0.993;1.000;0.998)3'
coverage = 0.999
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 28, cyto 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009297)
HIX0009297
HIT000582086 (
ENST00000477963
)
(Fibronectin type 3 and ankyrin repeat domains protein 1.)
genome : 127,692,717 - 127,698,159 (5,443)
query : 1 - 1,583 (1,583/1,583)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 28, cyto 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009297)
HIX0009299
HIT000349959 (
ENST00000368679
)
(Disintegrin and metalloproteinase domain-containing protein 12; ADAM 12; EC=3.4.24.-; Meltrin-alpha; Precursor;)
genome : 127,700,950 - 128,077,024 (376,075)
query : 1 - 7,938 (7,938/7,938)
23 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;0.974;1.000;
1.000;1.000;1.000;1.000;1.000;0.957;1.000;
1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.4.24.-
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 11, extr_plas 9.5, plas 6, lyso 4, golg 4,
mito 2, E.R. 2, pero 2, E.R._mito 2, mito_pero 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009299)
HIX0009299
HIT000012242
(
AK055628
)
(Hypothetical protein.)
genome : 127,700,956 - 127,703,336 (2,381)
query : 1 - 2,375 (2,375/2,375)
1 exon
identity = 0.997
3'(0.997)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 12.3333, cyto 9.5, nucl 9, extr 8,
cyto_pero 6, mito 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009299)
HIX0009299
HIT000200299 (
NM_003474
)
(Disintegrin and metalloproteinase domain-containing protein 12; ADAM 12; EC=3.4.24.-; Meltrin-alpha; Precursor;)
genome : 127,702,898 - 128,077,127 (374,230)
query : 1 - 6,093 (6,093/6,093)
23 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;0.974;1.000;
1.000;1.000;1.000;1.000;1.000;0.957;1.000;
1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.4.24.-
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 11, extr_plas 9.5, plas 6, lyso 4, golg 4,
mito 2, E.R. 2, pero 2, E.R._mito 2, mito_pero 2
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009299)
HIX0009299
HIT000062715
(
AF023476
)
Representative transcript
(Disintegrin and metalloproteinase domain-containing protein 12; ADAM 12; EC=3.4.24.-; Meltrin-alpha; Precursor;)
genome : 127,703,841 - 128,077,024 (373,184)
query : 1 - 5,042 (5,042/5,062)
23 exons
identity = 0.996
3'(0.998;1.000;0.994;1.000;1.000;1.000;1.000;
1.000;1.000;0.995;1.000;1.000;0.974;1.000;
1.000;1.000;1.000;1.000;1.000;0.957;1.000;
0.990;0.985)5'
coverage = 1.000
EC number :
EC 3.4.24.-
InterPro :
IPR000742 : Epidermal growth factor-like domain
IPR001590 : Peptidase M12B, ADAM/reprolysin
IPR001762 : Blood coagulation inhibitor, Disintegrin
IPR002870 : Peptidase M12B, propeptide
IPR006586 : ADAM, cysteine-rich
IPR018358 : Disintegrin, conserved site
IPR024079 : Metallopeptidase, catalytic domain
GO :
0004222 : Molecular Function : metalloendopeptidase activity
0005515 : Molecular Function : protein binding
0006508 : Biological Process : proteolysis
0008237 : Molecular Function : metallopeptidase activity
0008270 : Molecular Function : zinc ion binding
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 11, extr_plas 9.5, plas 6, lyso 4, golg 4,
mito 2, E.R. 2, pero 2, E.R._mito 2, mito_pero 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009299)
Ortholog candidate ( ->
Evola
)
Bos
sp. (Cow) : AB164682
Mus
sp. (Mouse) : D50411
Canis
sp. (Dog) : ENSCAFT00000020627
Oryzias
sp. (Medaka) : ENSORLT00000007214
Oryzias
sp. (Medaka) : ENSORLT00000012319
Pongo
sp. (Orangutan) : ENSPPYT00000003327
Tetraodon
sp. (Tetraodon) : GSTENT00019635001
Tetraodon
sp. (Tetraodon) : GSTENT00024968001
Takifugu
sp. (Fugu) : SINFRUT00000160837
Takifugu
sp. (Fugu) : SINFRUT00000173645
Rattus
sp. (Rat) : XM_001055685
Macaca
sp. (Macaque) : XM_001087980
Monodelphis
sp. (Opossum) : XM_001367837
Equus
sp. (Horse) : XM_001490047
Gallus
sp. (Chicken) : XM_423549
Pan
sp. (Chimpanzee) : XM_508106
Danio
sp. (Zebrafish) : XM_686639
HIX0127235
HIT000005470
(
AK022196
)
Representative transcript
(Conserved hypothetical protein.)
genome : 127,725,870 - 127,727,892 (2,023)
query : 1 - 2,024 (2,024/2,024)
1 exon
identity = 0.999
5'(0.999)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 28, mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0127235)
HIX0009299
HIT000208385 (
NM_021641
)
(Disintegrin and metalloproteinase domain-containing protein 12 isoform 2 preproprotein.)
genome : 127,729,913 - 128,077,127 (347,215)
query : 1 - 3,418 (3,418/3,433)
19 exons
identity = 0.998
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.974;1.000;1.000;1.000;1.000;1.000;
1.000;0.957;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 28, E.R. 1.5, E.R._golg 1.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009299)
HIX0009299
HIT000260106
(
BC060804
)
(Disintegrin and metalloproteinase domain-containing protein 12 isoform 2 preproprotein.)
genome : 127,729,913 - 128,077,065 (347,153)
query : 2 - 3,354 (3,353/3,369)
19 exons
identity = 0.998
3'(0.999;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.974;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;0.990;1.000)5'
coverage = 1.000
InterPro :
IPR000742 : Epidermal growth factor-like domain
IPR001590 : Peptidase M12B, ADAM/reprolysin
IPR001762 : Blood coagulation inhibitor, Disintegrin
IPR002870 : Peptidase M12B, propeptide
IPR006586 : ADAM, cysteine-rich
IPR018358 : Disintegrin, conserved site
IPR024079 : Metallopeptidase, catalytic domain
GO :
0004222 : Molecular Function : metalloendopeptidase activity
0005515 : Molecular Function : protein binding
0006508 : Biological Process : proteolysis
0008237 : Molecular Function : metallopeptidase activity
0008270 : Molecular Function : zinc ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 29, E.R. 1.5, E.R._golg 1.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009299)
HIX0009299
HIT000062716
(
AF023477
)
(Disintegrin and metalloproteinase domain-containing protein 12 isoform 2 preproprotein.)
genome : 127,729,913 - 128,077,024 (347,112)
query : 1 - 3,313 (3,313/3,328)
19 exons
identity = 0.994
3'(0.994;1.000;1.000;1.000;1.000;0.995;1.000;
1.000;0.974;1.000;1.000;1.000;1.000;1.000;
1.000;0.957;1.000;0.990;0.985)5'
coverage = 1.000
InterPro :
IPR000742 : Epidermal growth factor-like domain
IPR001590 : Peptidase M12B, ADAM/reprolysin
IPR001762 : Blood coagulation inhibitor, Disintegrin
IPR002870 : Peptidase M12B, propeptide
IPR006586 : ADAM, cysteine-rich
IPR018358 : Disintegrin, conserved site
IPR024079 : Metallopeptidase, catalytic domain
GO :
0004222 : Molecular Function : metalloendopeptidase activity
0005515 : Molecular Function : protein binding
0006508 : Biological Process : proteolysis
0008237 : Molecular Function : metallopeptidase activity
0008270 : Molecular Function : zinc ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 28, E.R. 1.5, E.R._golg 1.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009299)
HIX0009299
HIT000047729
(
AK127856
)
(Disintegrin and metalloproteinase domain-containing protein 12 isoform 2 preproprotein.)
genome : 127,729,914 - 128,077,045 (347,132)
query : 7 - 3,319 (3,313/3,319)
19 exons
identity = 0.992
3'(0.998;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.974;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;0.990;0.955)5'
coverage = 0.998
InterPro :
IPR000742 : Epidermal growth factor-like domain
IPR001590 : Peptidase M12B, ADAM/reprolysin
IPR001762 : Blood coagulation inhibitor, Disintegrin
IPR002870 : Peptidase M12B, propeptide
IPR006586 : ADAM, cysteine-rich
IPR018358 : Disintegrin, conserved site
IPR024079 : Metallopeptidase, catalytic domain
GO :
0004222 : Molecular Function : metalloendopeptidase activity
0005515 : Molecular Function : protein binding
0006508 : Biological Process : proteolysis
0008237 : Molecular Function : metallopeptidase activity
0008270 : Molecular Function : zinc ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 22, golg 3.5, E.R._golg 3.5, E.R. 2.5, nucl 1,
mito 1, pero 1, lyso 1, mito_pero 1, mito_nucl 1
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009299)
HIX0009299
HIT000252922
(
AY358878
)
(Disintegrin and metalloproteinase domain-containing protein 12 isoform 2 preproprotein.)
genome : 127,729,914 - 128,077,019 (347,106)
query : 4 - 3,305 (3,302/3,305)
19 exons
identity = 0.997
3'(1.000;1.000;1.000;0.995;1.000;0.995;1.000;
1.000;0.974;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;0.990;0.992)5'
coverage = 0.999
InterPro :
IPR000742 : Epidermal growth factor-like domain
IPR001590 : Peptidase M12B, ADAM/reprolysin
IPR001762 : Blood coagulation inhibitor, Disintegrin
IPR002870 : Peptidase M12B, propeptide
IPR006586 : ADAM, cysteine-rich
IPR018358 : Disintegrin, conserved site
IPR024079 : Metallopeptidase, catalytic domain
GO :
0004222 : Molecular Function : metalloendopeptidase activity
0005515 : Molecular Function : protein binding
0006508 : Biological Process : proteolysis
0008237 : Molecular Function : metallopeptidase activity
0008270 : Molecular Function : zinc ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 28, E.R. 1.5, E.R._golg 1.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009299)
HIX0009299
HIT000349956 (
ENST00000368676
)
(Disintegrin and metalloproteinase domain-containing protein 12 isoform 2 preproprotein.)
genome : 127,729,915 - 128,077,024 (347,110)
query : 1 - 3,313 (3,313/3,313)
19 exons
identity = 0.998
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.974;1.000;1.000;1.000;1.000;1.000;
1.000;0.957;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 28, E.R. 1.5, E.R._golg 1.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009299)
HIX0009299
HIT000424426
(
AK291629
)
(Disintegrin and metalloproteinase domain-containing protein 12 isoform 2 preproprotein.)
genome : 127,730,662 - 128,076,946 (346,285)
query : 1 - 2,479 (2,479/2,479)
19 exons
identity = 0.997
3'(1.000;1.000;1.000;1.000;1.000;1.000;0.989;
1.000;0.974;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;0.980;1.000)5'
coverage = 1.000
InterPro :
IPR000742 : Epidermal growth factor-like domain
IPR001590 : Peptidase M12B, ADAM/reprolysin
IPR001762 : Blood coagulation inhibitor, Disintegrin
IPR002870 : Peptidase M12B, propeptide
IPR006586 : ADAM, cysteine-rich
IPR024079 : Metallopeptidase, catalytic domain
GO :
0004222 : Molecular Function : metalloendopeptidase activity
0005515 : Molecular Function : protein binding
0006508 : Biological Process : proteolysis
0008237 : Molecular Function : metallopeptidase activity
0008270 : Molecular Function : zinc ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 28, E.R. 1.5, E.R._golg 1.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009299)
HIX0009299
HIT000571765 (
ENST00000467145
)
(Disintegrin and metalloproteinase domain-containing protein 12; ADAM 12; EC=3.4.24.-; Meltrin-alpha; Precursor;)
genome : 127,738,172 - 127,759,202 (21,031)
query : 1 - 600 (600/600)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.4.24.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 31
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009299)
HIX0009299
HIT000586233 (
ENST00000482291
)
(Disintegrin and metalloproteinase domain-containing protein 12; ADAM 12; EC=3.4.24.-; Meltrin-alpha; Precursor;)
genome : 127,753,264 - 127,755,575 (2,312)
query : 1 - 597 (597/597)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.4.24.-
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 21, cyto_nucl 5, nucl 4.5, cyto 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009299)
HIX0009299
HIT000589194 (
ENST00000485388
)
(Disintegrin and metalloproteinase domain-containing protein 12; ADAM 12; EC=3.4.24.-; Meltrin-alpha; Precursor;)
genome : 127,779,321 - 127,797,234 (17,914)
query : 1 - 352 (352/352)
3 exons
identity = 0.994
3'(1.000;0.949;1.000)5'
coverage = 1.000
EC number :
EC 3.4.24.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15, cyto_nucl 14.5, mito 8, nucl 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009299)
HIX0009299
HIT000546657 (
ENST00000448723
)
(Disintegrin and metalloproteinase domain-containing protein 12; ADAM 12; EC=3.4.24.-; Meltrin-alpha; Precursor;)
genome : 127,789,717 - 128,077,024 (287,308)
query : 1 - 1,145 (1,145/1,145)
9 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.4.24.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009299)
HIX0009299
HIT000598054 (
ENST00000494661
)
(Conserved hypothetical protein.)
genome : 127,823,937 - 127,843,874 (19,938)
query : 1 - 372 (372/372)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 20.5, mito_pero 11.5, nucl 4, extr 3, cyto 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009299)
HIX0128005
HIT000461139
(
DQ594608
)
Representative transcript
(Non-protein coding transcript.)
genome : 127,957,838 - 127,957,868 (31)
query : 1 - 31 (31/31)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0128005)
HIX0128294
pHIT000018385 ( pHIT000018385 )
Representative transcript
(Conserved hypothetical protein.)
genome : 127,961,387 - 127,962,013 (627)
query : 1 - 627 (627/627)
1 exon
InterPro :
IPR006687 : Small GTPase superfamily, SAR1-type
IPR006689 : Small GTPase superfamily, ARF/SAR type
GO :
0005525 : Molecular Function : GTP binding
0005622 : Cellular Component : intracellular
0006886 : Biological Process : intracellular protein transport
SOSUI :
SOLUBLE PROTEIN
JIGSAW prediction
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0128294)
CAGE tag :
H35BA35M0601
Ortholog candidate ( ->
Evola
)
Macaca
sp. (Macaque) : ENSMMUT00000012434
Oryzias
sp. (Medaka) : ENSORLT00000008520
Monodelphis
sp. (Opossum) : XM_001376026
HIX0128294
HIT000476172 (
ENST00000392696
)
(Small GTPase superfamily, ARF/SAR type protein.)
genome : 127,961,387 - 127,961,980 (594)
query : 1 - 594 (594/594)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 14, nucl 10.5, cyto 10.5, mito 7.5,
E.R._mito 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0128294)
HIX0201539
HIT000007659
(
AK024385
)
Representative transcript
(Conserved hypothetical protein.)
genome : 128,056,946 - 128,062,072 (5,127)
query : 1 - 5,120 (5,120/5,120)
1 exon
identity = 0.996
3'(0.996)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 20, nucl 6, cyto 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201539)
HIX0171226
HIT000554448 (
ENST00000456514
)
(Hypothetical short protein.)
genome : 128,102,438 - 128,110,448 (8,011)
query : 1 - 1,168 (1,168/1,168)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 21, cyto 9
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0171226)
HIX0171226
HIT000727589 (
NR_073453
)
(Hypothetical short protein.)
genome : 128,102,438 - 128,110,448 (8,011)
query : 1 - 1,168 (1,168/1,168)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 21, cyto 9
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0171226)
HIX0009301
HIT000315831 (
NM_001004298
)
(Centrosomal protein C10orf90; Fragile-site associated tumor suppressor homolog;)
genome : 128,113,575 - 128,210,010 (96,436)
query : 1 - 3,079 (3,079/3,097)
9 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19.5, cyto_nucl 17, cyto 11.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009301)
HIX0009301
HIT000090380
(
BC021140
)
(Centrosomal protein C10orf90; Fragile-site associated tumor suppressor homolog;)
genome : 128,113,575 - 128,153,433 (39,859)
query : 1 - 1,592 (1,592/1,610)
6 exons
identity = 0.999
3'(0.998;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR029299 : ALMS motif
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18.5, cyto_nucl 13, cyto 6.5, extr 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009301)
HIX0009301
HIT000079638
(
AF435960
)
(Centrosomal protein C10orf90; Fragile-site associated tumor suppressor homolog;)
genome : 128,113,566 - 128,192,687 (79,122)
query : 1 - 1,594 (1,594/1,596)
6 exons
identity = 0.999
3'(0.999;1.000;1.000;1.000;1.000;1.000)5'
coverage = 0.999
InterPro :
IPR029299 : ALMS motif
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16.5, cyto_nucl 12, cyto 6.5, mito 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009301)
HIX0009301
HIT000310790 (
ENST00000356858
)
(Centrosomal protein C10orf90; Fragile-site associated tumor suppressor homolog;)
genome : 128,113,566 - 128,209,428 (95,863)
query : 1 - 3,678 (3,678/3,678)
9 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17, cyto_nucl 16, cyto 13
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009301)
HIX0009301
HIT000522861 (
ENST00000424927
)
(Centrosomal protein C10orf90; Fragile-site associated tumor suppressor homolog;)
genome : 128,113,566 - 128,192,687 (79,122)
query : 1 - 1,595 (1,595/1,595)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16.5, cyto_nucl 12, cyto 6.5, mito 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009301)
HIX0009301
HIT000112524 (
ENST00000284694
)
(Centrosomal protein C10orf90; Fragile-site associated tumor suppressor homolog;)
genome : 128,113,578 - 128,210,010 (96,433)
query : 1 - 3,076 (3,076/3,076)
9 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19.5, cyto_nucl 17, cyto 11.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009301)
HIX0009301
HIT000552275 (
ENST00000454341
)
(Centrosomal protein C10orf90; Fragile-site associated tumor suppressor homolog;)
genome : 128,113,578 - 128,210,010 (96,433)
query : 1 - 2,785 (2,785/2,785)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 20.5, cyto_nucl 16.8333, cyto 10, cyto_golg 6.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009301)
HIX0009301
HIT000584401 (
ENST00000480379
)
(Centrosomal protein C10orf90; Fragile-site associated tumor suppressor homolog;)
genome : 128,114,121 - 128,151,945 (37,825)
query : 1 - 1,012 (1,012/1,012)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18, cyto 9, mito_nucl 9
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009301)
HIX0009301
HIT000492201
(
AK297577
)
Representative transcript
(Centrosomal protein C10orf90; Fragile-site associated tumor suppressor homolog;)
genome : 128,114,134 - 128,359,079 (244,946)
query : 1 - 2,721 (2,721/2,721)
10 exons
identity = 0.998
3'(0.997;1.000;1.000;1.000;1.000;1.000;0.997;
0.989;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR029299 : ALMS motif
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29.5, cyto_nucl 16
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009301)
Ortholog candidate ( ->
Evola
)
Macaca
sp. (Macaque) : AB070021
Mus
sp. (Mouse) : AK016590
Bos
sp. (Cow) : BC133554
Gallus
sp. (Chicken) : CR387877
Pongo
sp. (Orangutan) : ENSPPYT00000003328
Rattus
sp. (Rat) : ENSRNOT00000038122
Pan
sp. (Chimpanzee) : XM_001140407
Monodelphis
sp. (Opossum) : XM_001368322
Equus
sp. (Horse) : XM_001488777
Canis
sp. (Dog) : XM_535059
HIX0009301
HIT000643803 (
ENST00000544758
)
(Centrosomal protein C10orf90; Fragile-site associated tumor suppressor homolog;)
genome : 128,114,134 - 128,359,079 (244,946)
query : 1 - 2,720 (2,720/2,720)
10 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29.5, cyto_nucl 16
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009301)
HIX0009301
HIT000503126
(
BC146869
)
(Centrosomal protein C10orf90; Fragile-site associated tumor suppressor homolog;)
genome : 128,114,206 - 128,209,997 (95,792)
query : 1 - 2,435 (2,435/2,435)
9 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;0.999;
0.989;0.992)5'
coverage = 1.000
InterPro :
IPR029299 : ALMS motif
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19.5, cyto_nucl 17, cyto 11.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009301)
HIX0009301
HIT000501638
(
BC140898
)
(Centrosomal protein C10orf90; Fragile-site associated tumor suppressor homolog;)
genome : 128,114,209 - 128,209,997 (95,789)
query : 1 - 2,432 (2,432/2,432)
9 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;0.999;
0.989;0.992)5'
coverage = 1.000
InterPro :
IPR029299 : ALMS motif
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19.5, cyto_nucl 17, cyto 11.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009301)
HIX0009301
HIT000093589
(
BC034828
)
(Centrosomal protein C10orf90; Fragile-site associated tumor suppressor homolog;)
genome : 128,114,340 - 128,209,428 (95,089)
query : 2 - 2,888 (2,887/2,924)
9 exons
identity = 0.993
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.989;0.973)5'
coverage = 1.000
InterPro :
IPR029299 : ALMS motif
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17, cyto_nucl 16, cyto 13
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009301)
HIX0009301
HIT000427223
(
AK308357
)
(Centrosomal protein C10orf90; Fragile-site associated tumor suppressor homolog;)
genome : 128,114,344 - 128,487,277 (372,934)
query : 1 - 1,972 (1,972/1,972)
9 exons
identity = 0.994
3'(1.000;1.000;1.000;0.989;1.000;0.992;0.989;
1.000;1.000)5'
coverage = 1.000
InterPro :
IPR029299 : ALMS motif
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17.5, cyto_nucl 17.5, cyto 14.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009301)
HIX0025996
HIT000045400
(
AK125527
)
Representative transcript
(Conserved hypothetical protein.)
genome : 128,114,499 - 128,149,526 (35,028)
query : 1 - 2,976 (2,976/2,976)
7 exons
identity = 0.997
5'(1.000;0.992;1.000;1.000;0.974;1.000;0.998)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 27.5, cyto_mito 15.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0025996)
Ortholog candidate ( ->
Evola
)
Pan
sp. (Chimpanzee) : XM_001140739
HIX0009301
HIT000014114
(
AK057500
)
(Centrosomal protein C10orf90; Fragile-site associated tumor suppressor homolog;)
genome : 128,114,635 - 128,210,010 (95,376)
query : 1 - 2,107 (2,107/2,107)
8 exons
identity = 0.998
3'(1.000;0.984;1.000;1.000;1.000;0.999;0.989;
0.993)5'
coverage = 1.000
InterPro :
IPR029299 : ALMS motif
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20.5, cyto_nucl 15.5, nucl 9.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009301)
HIX0009301
HIT000530576 (
ENST00000432642
)
(Centrosomal protein C10orf90; Fragile-site associated tumor suppressor homolog;)
genome : 128,114,635 - 128,210,010 (95,376)
query : 1 - 2,107 (2,107/2,107)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20.5, cyto_nucl 15.5, nucl 9.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009301)
HIX0009301
HIT000428083
(
AK309217
)
(Centrosomal protein C10orf90; Fragile-site associated tumor suppressor homolog;)
genome : 128,153,446 - 128,358,990 (205,545)
query : 1 - 1,993 (1,993/1,993)
6 exons
identity = 0.999
3'(1.000;1.000;1.000;0.989;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 20, cyto_nucl 13.3333, mito 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009301)
HIX0209371
eHIT000000402 ( ESTsASS_10_402 )
Representative transcript
(Non-protein coding transcript.)
genome : 128,185,387 - 128,189,548 (4,162)
query : 1 - 541 (541/541)
3 exons
ESTs assembly
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0209371)
ESTs used for assembly :
DB071510
HIX0009301
HIT000017960
(
AK093093
)
(Centrosomal protein C10orf90; Fragile-site associated tumor suppressor homolog;)
genome : 128,191,229 - 128,213,392 (22,164)
query : 1 - 2,035 (2,035/2,035)
6 exons
identity = 0.999
3'(1.000;0.998;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16.5, cyto_nucl 11.5, extr 8, cyto 5.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009301)
HIX0009301
HIT000349954 (
ENST00000368674
)
(Centrosomal protein C10orf90; Fragile-site associated tumor suppressor homolog;)
genome : 128,191,229 - 128,213,392 (22,164)
query : 1 - 2,035 (2,035/2,035)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16.5, cyto_nucl 11.5, extr 8, cyto 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009301)
HIX0009301
HIT000476170 (
ENST00000392694
)
(Centrosomal protein C10orf90; Fragile-site associated tumor suppressor homolog;)
genome : 128,191,354 - 128,210,010 (18,657)
query : 1 - 1,414 (1,414/1,414)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16, cyto 14
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009301)
HIX0009301
HIT000591839 (
ENST00000488181
)
(Centrosomal protein C10orf90; Fragile-site associated tumor suppressor homolog;)
genome : 128,193,001 - 128,359,015 (166,015)
query : 1 - 1,025 (1,025/1,025)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 12.5, cyto_nucl 12.3333, mito 9, cyto 7,
cyto_pero 5.66667
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009301)
HIX0009301
HIT000567891 (
ENST00000463082
)
(Centrosomal protein C10orf90 homolog; Fragile-site associated tumor suppressor;)
genome : 128,193,443 - 128,210,035 (16,593)
query : 1 - 566 (566/566)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 12.5, cyto_nucl 9, extr 8, nucl 4.5, mito 4,
extr_plas 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009301)
HIX0018549
HIT000007881
(
AK024607
)
Representative transcript
(Conserved hypothetical protein.)
genome : 128,331,938 - 128,334,158 (2,221)
query : 1 - 2,223 (2,223/2,235)
1 exon
identity = 0.999
5'(0.999)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 21, cyto_nucl 5.5, mito 5, cyto 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0018549)
HIX0127256
HIT000344080 (
ENST00000362451
)
(Non-protein coding transcript.)
genome : 128,468,271 - 128,468,343 (73)
query : 1 - 73 (73/73)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0127256)
HIX0170718
HIT000712982 (
ENST00000601242
)
(Hypothetical protein.)
genome : 128,798,541 - 128,824,686 (26,146)
query : 1 - 772 (772/772)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18.5, cyto_nucl 13, cyto 6.5, extr 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0170718)
HIX0170718
HIT000706417 (
ENST00000594614
)
(Conserved hypothetical protein.)
genome : 128,798,837 - 128,824,687 (25,851)
query : 1 - 781 (781/781)
4 exons
identity = 0.996
3'(1.000;1.000;0.981;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 15.5, cyto_nucl 13.5, cyto 8.5, extr 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0170718)
HIX0170718
HIT000707249 (
ENST00000595456
)
(Hypothetical short protein.)
genome : 128,798,971 - 128,824,687 (25,717)
query : 1 - 822 (822/822)
5 exons
identity = 0.996
3'(1.000;1.000;0.981;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17.5, cyto_nucl 10.5, mito 7, extr 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0170718)
HIX0170718
HIT000706362 (
ENST00000594559
)
(Conserved hypothetical protein.)
genome : 128,799,618 - 128,824,687 (25,070)
query : 1 - 725 (725/725)
4 exons
identity = 0.996
3'(1.000;1.000;0.981;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 28, nucl 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0170718)
HIX0170718
HIT000713563 (
ENST00000601826
)
(Hypothetical short protein.)
genome : 128,799,637 - 128,824,687 (25,051)
query : 1 - 837 (837/837)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17.5, cyto_nucl 10.5, mito 7, extr 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0170718)
HIX0170718
HIT000711729 (
ENST00000599979
)
(Hypothetical short protein.)
genome : 128,811,731 - 128,824,687 (12,957)
query : 1 - 802 (802/802)
5 exons
identity = 0.995
3'(1.000;0.975;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17.5, cyto_nucl 10.5, mito 7, extr 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0170718)
HIX0170718
HIT000518875 (
ENST00000420941
)
(Hypothetical short protein.)
genome : 128,811,765 - 128,814,220 (2,456)
query : 1 - 405 (405/405)
3 exons
identity = 0.990
3'(1.000;0.975;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0170718)
HIX0218985
HIT000266068
(
BC084559
)
Representative transcript
(Dedicator of cytokinesis family protein.)
genome : 128,821,067 - 128,824,324 (3,258)
query : 1 - 1,897 (1,897/1,914)
2 exons
identity = 0.993
5'(0.998;0.991)3'
coverage = 1.000
InterPro :
IPR026791 : Dedicator of cytokinesis
IPR027007 : DHR-1 domain
GO :
0005085 : Molecular Function : guanyl-nucleotide exchange factor activity
0007264 : Biological Process : small GTPase mediated signal transduction
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 15, mito 12, extr 2, nucl 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0218985)
HIX0170718
HIT000530488 (
ENST00000432554
)
(Non-protein coding transcript.)
genome : 128,823,205 - 128,824,771 (1,567)
query : 1 - 559 (559/559)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0170718)
HIX0201543
HIT000022752
(
AK097898
)
Representative transcript
(Conserved hypothetical protein.)
genome : 128,872,433 - 128,874,764 (2,332)
query : 1 - 2,325 (2,325/2,325)
1 exon
identity = 0.991
5'(0.991)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 12, cyto 10.5, cyto_nucl 10.1667,
cyto_pero 7.16667, nucl 4.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201543)
HIX0219021
HIT000578176 (
ENST00000473861
)
(Conserved hypothetical protein.)
genome : 128,908,509 - 128,926,360 (17,852)
query : 1 - 666 (666/666)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, cyto 10.5, cyto_nucl 7, mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0219021)
HIX0026022
HIT000047338
(
AK127465
)
Representative transcript
(FAM196 family protein.)
genome : 128,933,690 - 128,994,422 (60,733)
query : 1 - 4,408 (4,408/4,408)
6 exons
identity = 0.999
3'(0.999;1.000;0.999;0.996;1.000;0.994)5'
coverage = 1.000
InterPro :
IPR029337 : FAM196 family
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19.5, cyto_nucl 16, cyto 9.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026022)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK046846
Canis
sp. (Dog) : ENSCAFT00000020830
Equus
sp. (Horse) : ENSECAT00000005010
Oryzias
sp. (Medaka) : ENSORLT00000012422
Pongo
sp. (Orangutan) : ENSPPYT00000003330
Pan
sp. (Chimpanzee) : ENSPTRT00000005807
Rattus
sp. (Rat) : ENSRNOT00000047069
Tetraodon
sp. (Tetraodon) : GSTENT00019643001
Takifugu
sp. (Fugu) : SINFRUT00000131852
Macaca
sp. (Macaque) : XM_001089094
Bos
sp. (Cow) : XM_001252218
Danio
sp. (Zebrafish) : XM_001342058
Monodelphis
sp. (Opossum) : XM_001380013
Gallus
sp. (Chicken) : XM_423981
HIX0026022
HIT000366527 (
NM_001039762
)
(FAM196 family protein.)
genome : 128,933,690 - 128,994,422 (60,733)
query : 1 - 4,407 (4,407/4,407)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19.5, cyto_nucl 16, cyto 9.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026022)
HIX0026022
HIT000622068 (
ENST00000522781
)
(FAM196 family protein.)
genome : 128,933,694 - 128,994,422 (60,729)
query : 1 - 4,403 (4,403/4,403)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19.5, cyto_nucl 16, cyto 9.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026022)
HIX0026022
HIT000501080
(
BC137112
)
(FAM196 family protein.)
genome : 128,934,458 - 128,975,273 (40,816)
query : 1 - 3,220 (3,220/3,220)
4 exons
identity = 0.999
3'(0.999;1.000;0.999;0.992)5'
coverage = 1.000
InterPro :
IPR029337 : FAM196 family
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19.5, cyto_nucl 16, cyto 9.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026022)
HIX0026022
HIT000502888
(
BC144478
)
(FAM196 family protein.)
genome : 128,934,458 - 128,975,273 (40,816)
query : 1 - 3,148 (3,148/3,148)
3 exons
identity = 0.999
3'(0.999;0.999;0.992)5'
coverage = 1.000
InterPro :
IPR029337 : FAM196 family
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18, cyto_nucl 15.5, cyto 11
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026022)
HIX0026022
HIT000522745 (
ENST00000424811
)
(FAM196 family protein.)
genome : 128,934,458 - 128,975,273 (40,816)
query : 1 - 3,149 (3,149/3,149)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18, cyto_nucl 15.5, cyto 11
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026022)
HIX0026022
HIT000436072
(
BC152483
)
(FAM196 family protein.)
genome : 128,936,060 - 128,974,700 (38,641)
query : 1 - 1,450 (1,450/1,458)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 0.995
InterPro :
IPR029337 : FAM196 family
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18, cyto_nucl 15.5, cyto 11
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026022)
HIX0026022
HIT000436073
(
BC152484
)
(FAM196 family protein.)
genome : 128,936,060 - 128,974,700 (38,641)
query : 1 - 1,522 (1,522/1,530)
3 exons
identity = 0.999
3'(1.000;1.000;0.999)5'
coverage = 0.995
InterPro :
IPR029337 : FAM196 family
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19.5, cyto_nucl 16, cyto 9.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026022)
HIX0026022
HIT000390717
(
BC131825
)
(FAM196 family protein.)
genome : 128,936,060 - 128,974,700 (38,641)
query : 1 - 1,522 (1,522/1,522)
3 exons
identity = 0.999
3'(1.000;1.000;0.999)5'
coverage = 1.000
InterPro :
IPR029337 : FAM196 family
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19.5, cyto_nucl 16, cyto 9.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026022)
HIX0009302
HIT000002651
(
AK000176
)
Representative transcript
(Hypothetical protein.)
genome : 128,939,563 - 128,964,299 (24,737)
query : 1 - 1,814 (1,814/1,830)
2 exons
identity = 0.999
5'(0.988;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 27, mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009302)
HIX0035637
HIT000099089
(
BC049839
)
Representative transcript
(Hypothetical protein.)
genome : 129,009,383 - 129,011,075 (1,693)
query : 1 - 1,693 (1,693/1,708)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 22, plas 3.5, extr_plas 3, cyto 2, extr 1.5,
cyto_nucl 1.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0035637)
HIX0218820
HIT000588253 (
ENST00000484400
)
(Conserved hypothetical protein.)
genome : 129,046,272 - 129,142,864 (96,593)
query : 1 - 779 (779/779)
5 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14, mito 13.5, E.R._mito 7.5, extr 2, nucl 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0218820)
HIX0218820
HIT000598934 (
ENST00000495574
)
(Conserved hypothetical protein.)
genome : 129,046,289 - 129,056,052 (9,764)
query : 1 - 539 (539/539)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15.5, cyto_nucl 14.6667, cyto_plas 9.83333,
nucl 6.5, extr 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0218820)
HIX0218820
HIT000569213 (
ENST00000464466
)
(Conserved hypothetical protein.)
genome : 129,046,332 - 129,070,460 (24,129)
query : 1 - 323 (323/323)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20, cyto_nucl 13, extr 4, nucl 4, mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0218820)
HIX0026044
HIT000048819
(
AK129548
)
Representative transcript
(Conserved hypothetical protein.)
genome : 129,092,106 - 129,093,947 (1,842)
query : 1 - 1,838 (1,838/1,838)
1 exon
identity = 0.997
5'(0.997)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 15.5, nucl 14, cyto 11, extr 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026044)
HIX0026044
HIT000466705_10
(
DQ600174
)
(Non-protein coding transcript.)
genome : 129,092,646 - 129,092,675 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026044)
HIX0020123
HIT000197419 (
NM_000375
)
(Uroporphyrinogen-III synthase; UROIIIS; UROS; EC=4.2.1.75; Hydroxymethylbilane hydrolyase [cyclizing]; Uroporphyrinogen-III cosynthase;)
genome : 127,477,147 - 127,511,837 (34,691)
query : 1 - 1,354 (1,354/1,371)
10 exons
identity = 0.997
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 4.2.1.75
KEGG pathway :
00860 : Porphyrin and chlorophyll metabolism (72)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18.5, cyto_nucl 17.5, nucl 11.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0020123)
HIX0020123
HIT000031002
(
BC002573
)
Representative transcript
(Uroporphyrinogen-III synthase; UROIIIS; UROS; EC=4.2.1.75; Hydroxymethylbilane hydrolyase [cyclizing]; Uroporphyrinogen-III cosynthase;)
genome : 127,477,147 - 127,511,796 (34,650)
query : 1 - 1,313 (1,313/1,330)
10 exons
identity = 0.997
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 4.2.1.75
KEGG pathway :
00860 : Porphyrin and chlorophyll metabolism (72)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
InterPro :
IPR003754 : Tetrapyrrole biosynthesis, uroporphyrinogen III synthase
GO :
0004852 : Molecular Function : uroporphyrinogen-III synthase activity
0033014 : Biological Process : tetrapyrrole biosynthetic process
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18.5, cyto_nucl 17.5, nucl 11.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0020123)
Ortholog candidate ( ->
Evola
)
Danio
sp. (Zebrafish) : AF489105
Mus
sp. (Mouse) : AK148116
Rattus
sp. (Rat) : BC083730
Bos
sp. (Cow) : BC122614
Tetraodon
sp. (Tetraodon) : CR700862
Equus
sp. (Horse) : ENSECAT00000018506
Oryzias
sp. (Medaka) : ENSORLT00000012228
Pongo
sp. (Orangutan) : ENSPPYT00000003322
Takifugu
sp. (Fugu) : SINFRUT00000160832
Macaca
sp. (Macaque) : XM_001086537
Monodelphis
sp. (Opossum) : XM_001362141
Pan
sp. (Chimpanzee) : XM_508102
Canis
sp. (Dog) : XM_849099
HIX0020123
HIT000350077 (
ENST00000368797
)
(Uroporphyrinogen-III synthase; UROIIIS; UROS; EC=4.2.1.75; Hydroxymethylbilane hydrolyase [cyclizing]; Uroporphyrinogen-III cosynthase;)
genome : 127,477,147 - 127,511,796 (34,650)
query : 1 - 1,313 (1,313/1,313)
10 exons
identity = 0.997
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 4.2.1.75
KEGG pathway :
00860 : Porphyrin and chlorophyll metabolism (72)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18.5, cyto_nucl 17.5, nucl 11.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0020123)
HIX0020123
HIT000191209
(
J03824
)
(Uroporphyrinogen-III synthase; UROIIIS; UROS; EC=4.2.1.75; Hydroxymethylbilane hydrolyase [cyclizing]; Uroporphyrinogen-III cosynthase;)
genome : 127,477,152 - 127,511,767 (34,616)
query : 1 - 1,279 (1,279/1,279)
10 exons
identity = 0.995
3'(1.000;1.000;1.000;1.000;0.988)5'
coverage = 1.000
EC number :
EC 4.2.1.75
KEGG pathway :
00860 : Porphyrin and chlorophyll metabolism (72)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
InterPro :
IPR003754 : Tetrapyrrole biosynthesis, uroporphyrinogen III synthase
GO :
0004852 : Molecular Function : uroporphyrinogen-III synthase activity
0033014 : Biological Process : tetrapyrrole biosynthetic process
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18.5, cyto_nucl 17.5, nucl 11.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0020123)
HIX0020123
HIT000074587
(
AF230665
)
(Uroporphyrinogen-III synthase; UROIIIS; UROS; EC=4.2.1.75; Hydroxymethylbilane hydrolyase [cyclizing]; Uroporphyrinogen-III cosynthase;)
genome : 127,477,152 - 127,505,201 (28,050)
query : 1 - 1,216 (1,216/1,216)
9 exons
identity = 0.997
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 4.2.1.75
KEGG pathway :
00860 : Porphyrin and chlorophyll metabolism (72)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
InterPro :
IPR003754 : Tetrapyrrole biosynthesis, uroporphyrinogen III synthase
GO :
0004852 : Molecular Function : uroporphyrinogen-III synthase activity
0033014 : Biological Process : tetrapyrrole biosynthetic process
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18.5, cyto_nucl 17.5, nucl 11.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0020123)
HIX0020123
HIT000350066 (
ENST00000368786
)
(Uroporphyrinogen-III synthase; UROIIIS; UROS; EC=4.2.1.75; Hydroxymethylbilane hydrolyase [cyclizing]; Uroporphyrinogen-III cosynthase;)
genome : 127,477,152 - 127,505,201 (28,050)
query : 1 - 1,216 (1,216/1,216)
9 exons
identity = 0.997
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 4.2.1.75
KEGG pathway :
00860 : Porphyrin and chlorophyll metabolism (72)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18.5, cyto_nucl 17.5, nucl 11.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0020123)
HIX0020123
HIT000433762
(
AK314896
)
(Uroporphyrinogen-III synthase; UROIIIS; UROS; EC=4.2.1.75; Hydroxymethylbilane hydrolyase [cyclizing]; Uroporphyrinogen-III cosynthase;)
genome : 127,477,437 - 127,511,694 (34,258)
query : 1 - 921 (921/921)
10 exons
identity = 0.995
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 4.2.1.75
KEGG pathway :
00860 : Porphyrin and chlorophyll metabolism (72)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
InterPro :
IPR003754 : Tetrapyrrole biosynthesis, uroporphyrinogen III synthase
GO :
0004852 : Molecular Function : uroporphyrinogen-III synthase activity
0033014 : Biological Process : tetrapyrrole biosynthetic process
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18.5, cyto_nucl 17.5, nucl 11.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0020123)
HIX0020123
HIT000569965 (
ENST00000465260
)
(Uroporphyrinogen-III synthase; UROIIIS; UROS; EC=4.2.1.75; Hydroxymethylbilane hydrolyase [cyclizing]; Uroporphyrinogen-III cosynthase;)
genome : 127,477,489 - 127,504,821 (27,333)
query : 1 - 761 (761/761)
9 exons
identity = 0.993
3'(1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 4.2.1.75
KEGG pathway :
00860 : Porphyrin and chlorophyll metabolism (72)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 11, cyto_nucl 9, nucl 7.5, cyto 7.5, lyso 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0020123)
HIX0020123
HIT000518695 (
ENST00000420761
)
(Uroporphyrinogen-III synthase; UROIIIS; UROS; EC=4.2.1.75; Hydroxymethylbilane hydrolyase [cyclizing]; Uroporphyrinogen-III cosynthase;)
genome : 127,483,469 - 127,511,817 (28,349)
query : 1 - 802 (802/802)
8 exons
identity = 0.995
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 4.2.1.75
KEGG pathway :
00860 : Porphyrin and chlorophyll metabolism (72)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 23, cyto_nucl 16, nucl 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0020123)
HIX0009304
HIT000111943 (
ENST00000280333
)
(Dedicator of cytokinesis protein 1; 180 kDa protein downstream of CRK; DOCK180;)
genome : 128,593,978 - 129,250,781 (656,804)
query : 1 - 6,797 (6,797/6,797)
52 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 9, cyto_nucl 9, cyto 7, plas 6, mito 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009304)
HIX0009304
HIT000198363 (
NM_001380
)
(Dedicator of cytokinesis protein 1; 180 kDa protein downstream of CRK; DOCK180;)
genome : 128,594,023 - 129,250,780 (656,758)
query : 1 - 6,751 (6,751/6,751)
52 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 9, cyto_nucl 9, cyto 7, plas 6, mito 6
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009304)
HIX0009304
HIT000503035
(
BC144632
)
(Dedicator of cytokinesis protein 1.)
genome : 128,594,025 - 129,249,729 (655,705)
query : 1 - 5,762 (5,762/5,762)
52 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;0.986;1.000;1.000;1.000;
1.000;1.000;0.990;0.995;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
InterPro :
IPR001452 : SH3 domain
IPR010703 : Dedicator of cytokinesis C-terminal
IPR026791 : Dedicator of cytokinesis
IPR027007 : DHR-1 domain
IPR027357 : DHR-2 domain
GO :
0005085 : Molecular Function : guanyl-nucleotide exchange factor activity
0005515 : Molecular Function : protein binding
0007264 : Biological Process : small GTPase mediated signal transduction
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 9, cyto_nucl 9, cyto 7, plas 6, mito 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009304)
HIX0009304
HIT000503114
(
BC146857
)
(Dedicator of cytokinesis protein 1; 180 kDa protein downstream of CRK; DOCK180;)
genome : 128,594,025 - 129,249,729 (655,705)
query : 1 - 5,698 (5,698/5,698)
52 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;0.995;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;0.990;1.000;
1.000)3'
coverage = 1.000
InterPro :
IPR001452 : SH3 domain
IPR010703 : Dedicator of cytokinesis C-terminal
IPR026791 : Dedicator of cytokinesis
IPR027007 : DHR-1 domain
IPR027357 : DHR-2 domain
GO :
0005085 : Molecular Function : guanyl-nucleotide exchange factor activity
0005515 : Molecular Function : protein binding
0007264 : Biological Process : small GTPase mediated signal transduction
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 9, cyto_nucl 9, cyto 7, plas 6, mito 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009304)
HIX0009304
HIT000101645
(
D50857
)
Representative transcript
(Dedicator of cytokinesis protein 1; 180 kDa protein downstream of CRK; DOCK180;)
genome : 128,594,070 - 129,250,579 (656,510)
query : 7 - 6,509 (6,503/6,519)
52 exons
identity = 0.998
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;0.995;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 0.998
InterPro :
IPR001452 : SH3 domain
IPR010703 : Dedicator of cytokinesis C-terminal
IPR026791 : Dedicator of cytokinesis
IPR027007 : DHR-1 domain
IPR027357 : DHR-2 domain
GO :
0005085 : Molecular Function : guanyl-nucleotide exchange factor activity
0005515 : Molecular Function : protein binding
0007264 : Biological Process : small GTPase mediated signal transduction
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 9, cyto_nucl 9, cyto 7, plas 6, mito 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009304)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK164963
Gallus
sp. (Chicken) : ENSGALT00000001119
Macaca
sp. (Macaque) : ENSMMUT00000026078
Oryzias
sp. (Medaka) : ENSORLT00000012412
Pongo
sp. (Orangutan) : ENSPPYT00000003329
Pan
sp. (Chimpanzee) : ENSPTRT00000005803
Takifugu
sp. (Fugu) : SINFRUT00000131862
Monodelphis
sp. (Opossum) : XM_001373095
Equus
sp. (Horse) : XM_001489764
Rattus
sp. (Rat) : XM_219424
Canis
sp. (Dog) : XM_544064
Bos
sp. (Cow) : XM_617359
HIX0009295
pHIT000018379 ( pHIT000018379 )
(Conserved hypothetical protein.)
genome : 127,511,982 - 127,524,843 (12,862)
query : 1 - 792 (792/792)
6 exons
InterPro :
IPR025602 : BCP1 family
SOSUI :
SOLUBLE PROTEIN
JIGSAW prediction
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0009295)
CAGE tag :
H04BA63I2305,H04BB18D2205,H05BA03G2207
H05BB11H1811,H05BB85D0509
HIX0128294
pHIT000018385 ( pHIT000018385 )
Representative transcript
(Conserved hypothetical protein.)
genome : 127,961,387 - 127,962,013 (627)
query : 1 - 627 (627/627)
1 exon
InterPro :
IPR006687 : Small GTPase superfamily, SAR1-type
IPR006689 : Small GTPase superfamily, ARF/SAR type
GO :
0005525 : Molecular Function : GTP binding
0005622 : Cellular Component : intracellular
0006886 : Biological Process : intracellular protein transport
SOSUI :
SOLUBLE PROTEIN
JIGSAW prediction
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0128294)
CAGE tag :
H09BA25L1405,H11BA03E0105,H22BA37E0111
H22BB50A0508,H35BA35M0601
Ortholog candidate ( ->
Evola
)
Macaca
sp. (Macaque) : ENSMMUT00000012434
Oryzias
sp. (Medaka) : ENSORLT00000008520
Monodelphis
sp. (Opossum) : XM_001376026
HIX0209371
eHIT000000402 ( ESTsASS_10_402 )
Representative transcript
(Non-protein coding transcript.)
genome : 128,185,387 - 128,189,548 (4,162)
query : 1 - 541 (541/541)
3 exons
ESTs assembly
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0209371)
ESTs used for assembly :
DB071510
AL360176.22
127500001-127609598 F +
NCBI
AC063963.11
127609599-127786702 F +
NCBI
AC022015.6
127786703-127892591 F +
NCBI
AL691463.2
127892592-127903270 F +
NCBI
AC026226.9
127903271-128059826 F +
NCBI
AL589787.16
128059827-128192759 F +
NCBI
AL583860.7
128192760-128278604 F +
NCBI
AL392108.4
128278605-128421783 F +
NCBI
AL512272.15
128421784-128549334 F +
NCBI
AL607029.17
128549335-128605510 F +
NCBI
AL772134.16
128605511-128616069 F +
NCBI
150000
128616070-128766069 N
BX470155.5
128766070-128769294 F +
NCBI
BX470201.4
128769295-128779495 F +
NCBI
AL359094.14
128779496-128910524 F +
NCBI
AL390920.22
128910525-129076897 F +
NCBI
AL590372.7
129076898-129084241 F +
NCBI
AL157711.12
129084242-129100000 F +
NCBI