bases per tick :
500
200
100
50
20
10
5
2
kb first site :
main :
All Human Genes
JIGSAW prediction
ESTs assembly
homology :
UCSC
CCDS
Pseudogene.org
Conserved regions (
Segmental duplication
P.troglodytes
P.abelii
M.mulatta
M.musculus
R.norvegicus
C.familiaris
E.caballus
B.taurus
M.domestica
G.gallus
D.rerio
O.latipes
T.nigroviridis
T.rubripes
)
gene prediction :
FGENESH
GenScan
HMMgene
tRNA
show... :
SNPs
ESTs(summary)
ESTs(detail)
CAGE tag(summary)
CAGE tag(detail)
sequence viewer :
( start, end )
( middle, total length )
= (
,
)
HIX0218882
HIT000429791
(
AK310925
)
Representative transcript
(MIF4G-like, type 3 domain containing protein.)
genome : 11,993,896 - 12,084,799 (90,904)
query : 1 - 3,267 (3,267/3,267)
15 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.997;0.997;1.000)5'
coverage = 1.000
InterPro :
IPR003890 : MIF4G-like, type 3
IPR016021 : MIF4-like, type 1/2/3
GO :
0003723 : Molecular Function : RNA binding
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 17.3333, cyto 16, nucl 15.5, cyto_mito 9
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0218882)
HIX0035464
HIT000067248
(
AF086369
)
Representative transcript
(Hypothetical short protein.)
genome : 12,061,056 - 12,061,478 (423)
query : 1 - 423 (423/432)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
This sequence is too short.
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0035464)
HIX0218882
HIT000565492 (
ENST00000460569
)
(Conserved hypothetical protein.)
genome : 12,077,058 - 12,085,169 (8,112)
query : 1 - 640 (640/640)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 21.5, cyto_nucl 16, cyto 9.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0218882)
HIX0218882
HIT000334281
(
BC090919
)
(Conserved hypothetical protein.)
genome : 12,077,126 - 12,084,808 (7,683)
query : 1 - 370 (370/400)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 0.997
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23, cyto 9
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0218882)
HIX0218882
HIT000259397
(
BC054011
)
(Conserved hypothetical protein.)
genome : 12,077,206 - 12,077,442 (237)
query : 24 - 260 (237/289)
1 exon
identity = 0.996
3'(0.996)5'
coverage = 0.912
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 24, cyto 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0218882)
HIX0201498
HIT000207401 (
NM_018706
)
(Probable 2-oxoglutarate dehydrogenase E1 component DHKTD1, mitochondrial; EC=1.2.4.2; Dehydrogenase E1 and transketolase domain-containing protein 1; Precursor;)
genome : 12,110,916 - 12,165,227 (54,312)
query : 1 - 5,217 (5,217/5,217)
17 exons
identity = 0.999
5'(0.996;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;0.987;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 1.2.4.2
KEGG pathway :
00020 : Citrate cycle (TCA cycle) (22)
00310 : Lysine degradation (49)
00380 : Tryptophan metabolism (54)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
01120 : Microbial metabolism in diverse environments (468)
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 14, mito 12, cyto 5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201498)
HIX0201498
HIT000108715 (
ENST00000263035
)
(Probable 2-oxoglutarate dehydrogenase E1 component DHKTD1, mitochondrial; EC=1.2.4.2; Dehydrogenase E1 and transketolase domain-containing protein 1; Precursor;)
genome : 12,110,971 - 12,165,224 (54,254)
query : 1 - 5,159 (5,159/5,159)
17 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 1.2.4.2
KEGG pathway :
00020 : Citrate cycle (TCA cycle) (22)
00310 : Lysine degradation (49)
00380 : Tryptophan metabolism (54)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
01120 : Microbial metabolism in diverse environments (468)
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16, mito 10, cyto 5, E.R._mito 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201498)
HIX0201498
HIT000030924
(
BC002477
)
(Probable 2-oxoglutarate dehydrogenase E1 component DHKTD1, mitochondrial; EC=1.2.4.2; Dehydrogenase E1 and transketolase domain-containing protein 1; Precursor;)
genome : 12,110,971 - 12,163,219 (52,249)
query : 1 - 3,154 (3,154/3,171)
17 exons
identity = 0.998
5'(0.995;1.000;1.000;1.000;0.993;1.000;1.000;
1.000;1.000;0.993;0.987;0.991;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 1.2.4.2
KEGG pathway :
00020 : Citrate cycle (TCA cycle) (22)
00310 : Lysine degradation (49)
00380 : Tryptophan metabolism (54)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
01120 : Microbial metabolism in diverse environments (468)
InterPro :
IPR001017 : Dehydrogenase, E1 component
IPR005475 : Transketolase-like, pyrimidine-binding domain
IPR011603 : 2-oxoglutarate dehydrogenase E1 component
IPR029061 : Thiamin diphosphate-binding fold
GO :
0004591 : Molecular Function : oxoglutarate dehydrogenase (succinyl-transferring) activity
0006099 : Biological Process : tricarboxylic acid cycle
0008152 : Biological Process : metabolic process
0016624 : Molecular Function : oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
0030976 : Molecular Function : thiamine pyrophosphate binding
0055114 : Biological Process : oxidation-reduction process
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 14, mito 12, cyto 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201498)
HIX0201498
HIT000033555
(
BC007955
)
(Probable 2-oxoglutarate dehydrogenase E1 component DHKTD1, mitochondrial; EC=1.2.4.2; Dehydrogenase E1 and transketolase domain-containing protein 1; Precursor;)
genome : 12,110,989 - 12,163,219 (52,231)
query : 1 - 3,136 (3,136/3,153)
17 exons
identity = 0.999
5'(0.995;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;0.987;0.991;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 1.2.4.2
KEGG pathway :
00020 : Citrate cycle (TCA cycle) (22)
00310 : Lysine degradation (49)
00380 : Tryptophan metabolism (54)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
01120 : Microbial metabolism in diverse environments (468)
InterPro :
IPR001017 : Dehydrogenase, E1 component
IPR005475 : Transketolase-like, pyrimidine-binding domain
IPR011603 : 2-oxoglutarate dehydrogenase E1 component
IPR029061 : Thiamin diphosphate-binding fold
GO :
0004591 : Molecular Function : oxoglutarate dehydrogenase (succinyl-transferring) activity
0006099 : Biological Process : tricarboxylic acid cycle
0008152 : Biological Process : metabolic process
0016624 : Molecular Function : oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
0030976 : Molecular Function : thiamine pyrophosphate binding
0055114 : Biological Process : oxidation-reduction process
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 14, mito 12, cyto 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201498)
HIX0201498
HIT000428676
(
AK309810
)
Representative transcript
(Probable 2-oxoglutarate dehydrogenase E1 component DHKTD1, mitochondrial; EC=1.2.4.2; Dehydrogenase E1 and transketolase domain-containing protein 1; Precursor;)
genome : 12,111,008 - 12,167,208 (56,201)
query : 1 - 2,742 (2,742/2,742)
17 exons
identity = 0.997
5'(0.994;1.000;1.000;1.000;1.000;1.000;0.995;
0.994;1.000;1.000;0.987;0.991;1.000;1.000;
1.000;0.988;1.000)3'
coverage = 1.000
EC number :
EC 1.2.4.2
KEGG pathway :
00020 : Citrate cycle (TCA cycle) (22)
00310 : Lysine degradation (49)
00380 : Tryptophan metabolism (54)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
01120 : Microbial metabolism in diverse environments (468)
InterPro :
IPR001017 : Dehydrogenase, E1 component
IPR005475 : Transketolase-like, pyrimidine-binding domain
IPR011603 : 2-oxoglutarate dehydrogenase E1 component
IPR029061 : Thiamin diphosphate-binding fold
GO :
0004591 : Molecular Function : oxoglutarate dehydrogenase (succinyl-transferring) activity
0006099 : Biological Process : tricarboxylic acid cycle
0008152 : Biological Process : metabolic process
0016624 : Molecular Function : oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
0030976 : Molecular Function : thiamine pyrophosphate binding
0055114 : Biological Process : oxidation-reduction process
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17, mito 8, cyto 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201498)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK049272
Danio
sp. (Zebrafish) : BC086742
Rattus
sp. (Rat) : BC099075
Equus
sp. (Horse) : ENSECAT00000009772
Oryzias
sp. (Medaka) : ENSORLT00000004901
Pongo
sp. (Orangutan) : ENSPPYT00000003411
Tetraodon
sp. (Tetraodon) : GSTENT00029738001
Takifugu
sp. (Fugu) : SINFRUT00000148721
Macaca
sp. (Macaque) : XM_001085071
Pan
sp. (Chimpanzee) : XM_001135864
Monodelphis
sp. (Opossum) : XM_001367853
Gallus
sp. (Chicken) : XM_423753
Canis
sp. (Dog) : XM_535192
HIX0201498
HIT000535232 (
ENST00000437298
)
(Probable 2-oxoglutarate dehydrogenase E1 component DHKTD1, mitochondrial; EC=1.2.4.2; Dehydrogenase E1 and transketolase domain-containing protein 1; Precursor;)
genome : 12,111,023 - 12,133,642 (22,620)
query : 1 - 933 (933/933)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 1.2.4.2
KEGG pathway :
00020 : Citrate cycle (TCA cycle) (22)
00310 : Lysine degradation (49)
00380 : Tryptophan metabolism (54)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
01120 : Microbial metabolism in diverse environments (468)
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 14, nucl 13.5, cyto_nucl 9, cyto 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201498)
HIX0201498
HIT000570307 (
ENST00000465617
)
(Probable 2-oxoglutarate dehydrogenase E1 component DHKTD1, mitochondrial; EC=1.2.4.2; Dehydrogenase E1 and transketolase domain-containing protein 1; Precursor;)
genome : 12,123,523 - 12,139,957 (16,435)
query : 1 - 773 (773/773)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 1.2.4.2
KEGG pathway :
00020 : Citrate cycle (TCA cycle) (22)
00310 : Lysine degradation (49)
00380 : Tryptophan metabolism (54)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
01120 : Microbial metabolism in diverse environments (468)
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 15.5, cyto_nucl 10.5, extr 10, cyto 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201498)
HIX0201498
HIT000513869 (
ENST00000415935
)
(Probable 2-oxoglutarate dehydrogenase E1 component DHKTD1, mitochondrial; EC=1.2.4.2; Dehydrogenase E1 and transketolase domain-containing protein 1; Precursor;)
genome : 12,131,174 - 12,136,300 (5,127)
query : 1 - 482 (482/482)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 1.2.4.2
KEGG pathway :
00020 : Citrate cycle (TCA cycle) (22)
00310 : Lysine degradation (49)
00380 : Tryptophan metabolism (54)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
01120 : Microbial metabolism in diverse environments (468)
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, cyto_nucl 10.5, cyto 8, nucl 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201498)
HIX0201498
HIT000306709
(
CR749726
)
(Probable 2-oxoglutarate dehydrogenase E1 component DHKTD1, mitochondrial; EC=1.2.4.2; Dehydrogenase E1 and transketolase domain-containing protein 1; Precursor;)
genome : 12,133,660 - 12,163,219 (29,560)
query : 1 - 1,957 (1,957/1,975)
12 exons
identity = 0.997
5'(1.000;1.000;0.997;1.000;0.993;0.987;0.991;
1.000;1.000;1.000;1.000;1.000)3'
coverage = 0.999
EC number :
EC 1.2.4.2
KEGG pathway :
00020 : Citrate cycle (TCA cycle) (22)
00310 : Lysine degradation (49)
00380 : Tryptophan metabolism (54)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
01120 : Microbial metabolism in diverse environments (468)
InterPro :
IPR001017 : Dehydrogenase, E1 component
IPR005475 : Transketolase-like, pyrimidine-binding domain
IPR011603 : 2-oxoglutarate dehydrogenase E1 component
IPR029061 : Thiamin diphosphate-binding fold
GO :
0004591 : Molecular Function : oxoglutarate dehydrogenase (succinyl-transferring) activity
0006099 : Biological Process : tricarboxylic acid cycle
0008152 : Biological Process : metabolic process
0016624 : Molecular Function : oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
0030976 : Molecular Function : thiamine pyrophosphate binding
0055114 : Biological Process : oxidation-reduction process
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18, cyto_nucl 14.5, nucl 7, mito 3, pero 3,
mito_pero 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201498)
HIX0201498
HIT000546763 (
ENST00000448829
)
(Probable 2-oxoglutarate dehydrogenase E1 component DHKTD1, mitochondrial; EC=1.2.4.2; Dehydrogenase E1 and transketolase domain-containing protein 1; Precursor;)
genome : 12,139,680 - 12,155,028 (15,349)
query : 10 - 787 (778/787)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 0.989
EC number :
EC 1.2.4.2
KEGG pathway :
00020 : Citrate cycle (TCA cycle) (22)
00310 : Lysine degradation (49)
00380 : Tryptophan metabolism (54)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
01120 : Microbial metabolism in diverse environments (468)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17, cyto_nucl 12.5, mito 8, nucl 4, E.R._mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201498)
HIX0201498
HIT000583353 (
ENST00000479283
)
(Probable 2-oxoglutarate dehydrogenase E1 component DHKTD1, mitochondrial; EC=1.2.4.2; Dehydrogenase E1 and transketolase domain-containing protein 1; Precursor;)
genome : 12,160,778 - 12,162,358 (1,581)
query : 1 - 318 (318/318)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
EC number :
EC 1.2.4.2
KEGG pathway :
00020 : Citrate cycle (TCA cycle) (22)
00310 : Lysine degradation (49)
00380 : Tryptophan metabolism (54)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
01120 : Microbial metabolism in diverse environments (468)
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 13, cyto 12, nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201498)
HIX0008644
HIT000360331 (
ENST00000379051
)
(Protein transport protein Sec61 subunit alpha isoform 2 isoform c.)
genome : 12,171,636 - 12,197,403 (25,768)
query : 1 - 707 (707/707)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 28, lyso 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008644)
HIX0008644
HIT000560710 (
NM_001142627
)
(Protein transport protein Sec61 subunit alpha isoform 2 isoform c.)
genome : 12,171,640 - 12,211,957 (40,318)
query : 1 - 2,092 (2,092/2,129)
12 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 28, E.R. 4
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008644)
HIX0008644
HIT000562740 (
NR_024576
)
(Protein transport protein Sec61 subunit alpha isoform 2 isoform c.)
genome : 12,171,640 - 12,211,957 (40,318)
query : 1 - 2,233 (2,233/2,270)
13 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 28, E.R. 4
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008644)
HIX0008644
HIT000562741 (
NR_024577
)
(Protein transport protein Sec61 subunit alpha isoform 2 isoform b.)
genome : 12,171,640 - 12,211,957 (40,318)
query : 1 - 2,366 (2,366/2,403)
14 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 30
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008644)
HIX0008644
HIT000206977 (
NM_018144
)
(Protein transport protein Sec61 subunit alpha isoform 2 isoform a.)
genome : 12,171,640 - 12,207,403 (35,764)
query : 1 - 2,528 (2,528/2,528)
12 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 28, E.R. 4
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008644)
HIX0008644
HIT000360313 (
ENST00000379033
)
(Protein transport protein Sec61 subunit alpha isoform 2 isoform b.)
genome : 12,171,640 - 12,207,403 (35,764)
query : 1 - 2,462 (2,462/2,462)
11 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 28, E.R. 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008644)
HIX0008644
HIT000560711 (
NM_001142628
)
(Protein transport protein Sec61 subunit alpha isoform 2 isoform b.)
genome : 12,171,640 - 12,207,403 (35,764)
query : 1 - 2,462 (2,462/2,462)
11 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 28, E.R. 4
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008644)
HIX0008644
HIT000539302 (
ENST00000441368
)
(Protein transport protein Sec61 subunit alpha isoform 2 isoform c.)
genome : 12,171,665 - 12,199,962 (28,298)
query : 1 - 691 (691/691)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 21, lyso 6, pero 2, E.R._mito 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008644)
HIX0008644
HIT000496465
(
AK301841
)
(Protein transport protein Sec61 subunit alpha isoform 2 isoform b.)
genome : 12,171,687 - 12,206,586 (34,900)
query : 1 - 1,598 (1,598/1,598)
11 exons
identity = 0.999
5'(0.991;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.995;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR002208 : SecY/SEC61-alpha family
IPR019561 : Translocon Sec61/SecY, plug domain
IPR023201 : SecY subunit domain
GO :
0015031 : Biological Process : protein transport
0016020 : Cellular Component : membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 28, E.R. 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008644)
HIX0008644
HIT000040130
(
BC026179
)
(Protein transport protein Sec61 subunit alpha isoform 2 isoform c.)
genome : 12,171,693 - 12,211,957 (40,265)
query : 4 - 2,183 (2,180/2,220)
13 exons
identity = 0.998
5'(1.000;1.000;1.000;1.000;1.000;0.991;1.000;
1.000;1.000;1.000;1.000;0.993;0.997)3'
coverage = 0.999
InterPro :
IPR002208 : SecY/SEC61-alpha family
IPR019561 : Translocon Sec61/SecY, plug domain
IPR023201 : SecY subunit domain
GO :
0015031 : Biological Process : protein transport
0016020 : Cellular Component : membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 28, E.R. 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008644)
HIX0008644
HIT000425092
(
AK292295
)
(Protein transport protein Sec61 subunit alpha isoform 2 isoform a.)
genome : 12,171,690 - 12,206,788 (35,099)
query : 1 - 1,863 (1,863/1,863)
12 exons
identity = 0.999
5'(0.990;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;0.998)3'
coverage = 1.000
InterPro :
IPR002208 : SecY/SEC61-alpha family
IPR019561 : Translocon Sec61/SecY, plug domain
IPR023201 : SecY subunit domain
GO :
0015031 : Biological Process : protein transport
0016020 : Cellular Component : membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 28, E.R. 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008644)
HIX0008644
HIT000579518 (
ENST00000475268
)
(Protein transport protein Sec61 subunit alpha isoform 2 isoform c.)
genome : 12,171,693 - 12,211,960 (40,268)
query : 1 - 2,183 (2,183/2,183)
13 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 28, E.R. 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008644)
HIX0008644
HIT000598735 (
ENST00000495368
)
(Protein transport protein Sec61 subunit alpha isoform 2 isoform b.)
genome : 12,171,698 - 12,211,960 (40,263)
query : 1 - 2,311 (2,311/2,311)
14 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 30
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008644)
HIX0008644
HIT000078131
(
AF346603
)
Representative transcript
(Protein transport protein Sec61 subunit alpha isoform 2 isoform a.)
genome : 12,171,698 - 12,206,826 (35,129)
query : 1 - 1,893 (1,893/1,893)
12 exons
identity = 0.996
5'(0.979;1.000;1.000;1.000;0.992;1.000;1.000;
1.000;1.000;1.000;1.000;0.993)3'
coverage = 1.000
InterPro :
IPR002208 : SecY/SEC61-alpha family
IPR019561 : Translocon Sec61/SecY, plug domain
IPR023201 : SecY subunit domain
GO :
0015031 : Biological Process : protein transport
0016020 : Cellular Component : membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 28, E.R. 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008644)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK077701
Danio
sp. (Zebrafish) : BC044351
Bos
sp. (Cow) : BC112848
Gallus
sp. (Chicken) : CR405768
Pongo
sp. (Orangutan) : CR925994
Monodelphis
sp. (Opossum) : ENSMODT00000021367
Oryzias
sp. (Medaka) : ENSORLT00000001548
Pan
sp. (Chimpanzee) : ENSPTRT00000004203
Tetraodon
sp. (Tetraodon) : GSTENT00013644001
Takifugu
sp. (Fugu) : SINFRUT00000157388
Macaca
sp. (Macaque) : XM_001085071
Equus
sp. (Horse) : XM_001499113
Rattus
sp. (Rat) : XM_341558
Canis
sp. (Dog) : XM_535191
HIX0008644
HIT000115072 (
ENST00000298428
)
(Protein transport protein Sec61 subunit alpha isoform 2 isoform a.)
genome : 12,171,698 - 12,206,826 (35,129)
query : 1 - 1,893 (1,893/1,893)
12 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 28, E.R. 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008644)
HIX0008644
HIT000014146
(
AK057532
)
(Protein transport protein Sec61 subunit alpha isoform 2 isoform b.)
genome : 12,171,700 - 12,211,955 (40,256)
query : 2 - 2,305 (2,304/2,305)
14 exons
identity = 0.998
5'(0.989;0.985;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;0.997)3'
coverage = 1.000
InterPro :
IPR002208 : SecY/SEC61-alpha family
IPR019561 : Translocon Sec61/SecY, plug domain
IPR023201 : SecY subunit domain
GO :
0015031 : Biological Process : protein transport
0016020 : Cellular Component : membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 30
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008644)
HIX0008644
HIT000116680 (
ENST00000304267
)
(Protein transport protein Sec61 subunit alpha isoform 2 isoform c.)
genome : 12,171,700 - 12,211,955 (40,256)
query : 1 - 2,030 (2,030/2,030)
12 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 28, E.R. 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008644)
HIX0008644
HIT000576608 (
ENST00000472221
)
(Protein transport protein Sec61 subunit alpha isoform 2 isoform c.)
genome : 12,171,701 - 12,200,047 (28,347)
query : 1 - 850 (850/850)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 28, lyso 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008644)
HIX0008644
HIT000005914
(
AK022640
)
(Protein transport protein Sec61 subunit alpha isoform 2 isoform c.)
genome : 12,171,708 - 12,211,956 (40,249)
query : 4 - 2,026 (2,023/2,026)
12 exons
identity = 0.998
5'(1.000;0.985;1.000;1.000;1.000;0.982;1.000;
1.000;1.000;1.000;1.000;0.997)3'
coverage = 0.999
InterPro :
IPR002208 : SecY/SEC61-alpha family
IPR019561 : Translocon Sec61/SecY, plug domain
IPR023201 : SecY subunit domain
GO :
0015031 : Biological Process : protein transport
0016020 : Cellular Component : membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 26, E.R. 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008644)
HIX0008644
HIT000360300 (
ENST00000379020
)
(Protein transport protein Sec61 subunit alpha isoform 2 isoform c.)
genome : 12,171,726 - 12,207,411 (35,686)
query : 1 - 2,252 (2,252/2,252)
11 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 28, E.R. 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008644)
HIX0008644
HIT000360297 (
ENST00000379017
)
(Protein transport protein Sec61 subunit alpha isoform 2 isoform c.)
genome : 12,171,732 - 12,195,819 (24,088)
query : 1 - 600 (600/600)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008644)
HIX0008644
HIT000554968 (
ENST00000457034
)
(Protein transport protein Sec61 subunit alpha;)
genome : 12,178,108 - 12,191,766 (13,659)
query : 1 - 314 (314/314)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 27, pero 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008644)
HIX0008644
HIT000516706 (
ENST00000418772
)
(Protein transport protein Sec61 subunit alpha isoform 2 isoform c.)
genome : 12,185,139 - 12,200,042 (14,904)
query : 1 - 434 (434/434)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 13, E.R._mito 5, plas 4, extr 3, nucl 3, mito 3,
E.R. 3, pero 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008644)
HIX0008644
HIT000516955 (
ENST00000419021
)
(Protein transport protein Sec61 subunit alpha isoform 2 isoform b.)
genome : 12,191,855 - 12,206,546 (14,692)
query : 1 - 778 (778/778)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 27, lyso 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008644)
HIX0008644
HIT000005301
(
AK022027
)
(Protein transport protein Sec61 subunit alpha isoform 2 isoform b.)
genome : 12,197,785 - 12,206,826 (9,042)
query : 1 - 1,334 (1,334/1,334)
6 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;0.998)3'
coverage = 1.000
InterPro :
IPR002208 : SecY/SEC61-alpha family
IPR023201 : SecY subunit domain
GO :
0015031 : Biological Process : protein transport
0016020 : Cellular Component : membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 25, lyso 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008644)
HIX0008644
HIT000003914
(
AK001440
)
(Protein transport protein Sec61 subunit alpha isoform 2 isoform b.)
genome : 12,198,908 - 12,206,826 (7,919)
query : 1 - 1,186 (1,186/1,186)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 23, lyso 9
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008644)
HIX0008644
HIT000571104 (
ENST00000466451
)
(Protein transport protein Sec61 subunit alpha isoform 2 isoform c.)
genome : 12,199,018 - 12,200,284 (1,267)
query : 1 - 427 (427/427)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 26, pero 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008644)
HIX0008645
HIT000043604
(
AK123731
)
(Hypothetical short protein.)
genome : 12,207,089 - 12,208,970 (1,882)
query : 1 - 1,882 (1,882/1,882)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
plas 24, extr 3, nucl 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008645)
HIX0008645
HIT000595134 (
ENST00000491614
)
(ADP-sugar pyrophosphatase; EC=3.6.1.13; 8-oxo-dGDP phosphatase; EC=3.6.1.58; Nucleoside diphosphate-linked moiety X motif 5; Nudix motif 5; YSA1H;)
genome : 12,207,324 - 12,238,123 (30,800)
query : 1 - 3,433 (3,433/3,433)
9 exons
identity = 0.999
3'(1.000;1.000;0.955;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.6.1.13
KEGG pathway :
00230 : Purine metabolism (100)
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008645)
HIX0008645
HIT000360209 (
ENST00000378929
)
(ADP-sugar pyrophosphatase.)
genome : 12,208,502 - 12,237,865 (29,364)
query : 1 - 929 (929/929)
9 exons
identity = 0.995
3'(1.000;1.000;0.955;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.6.1.13
KEGG pathway :
00230 : Purine metabolism (100)
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008645)
HIX0008645
HIT000074295
(
AF218818
)
(ADP-sugar pyrophosphatase; EC=3.6.1.13; 8-oxo-dGDP phosphatase; EC=3.6.1.58; Nucleoside diphosphate-linked moiety X motif 5; Nudix motif 5; YSA1H;)
genome : 12,209,351 - 12,237,846 (28,496)
query : 1 - 1,129 (1,129/1,129)
9 exons
identity = 0.989
3'(0.987;1.000;0.955;1.000;1.000;0.961;1.000;
1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.6.1.13
KEGG pathway :
00230 : Purine metabolism (100)
InterPro :
IPR000086 : NUDIX hydrolase domain
IPR015797 : NUDIX hydrolase domain-like
IPR020084 : NUDIX hydrolase, conserved site
IPR020476 : NUDIX hydrolase
GO :
0016787 : Molecular Function : hydrolase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008645)
HIX0008645
HIT000423928
(
AK291131
)
(ADP-sugar pyrophosphatase; EC=3.6.1.13; 8-oxo-dGDP phosphatase; EC=3.6.1.58; Nucleoside diphosphate-linked moiety X motif 5; Nudix motif 5; YSA1H;)
genome : 12,209,426 - 12,237,879 (28,454)
query : 1 - 1,087 (1,087/1,087)
9 exons
identity = 0.994
3'(0.997;1.000;0.955;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.6.1.13
KEGG pathway :
00230 : Purine metabolism (100)
InterPro :
IPR000086 : NUDIX hydrolase domain
IPR015797 : NUDIX hydrolase domain-like
IPR020084 : NUDIX hydrolase, conserved site
IPR020476 : NUDIX hydrolase
GO :
0016787 : Molecular Function : hydrolase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008645)
HIX0008645
HIT000002067
(
AF161464
)
(ADP-sugar pyrophosphatase; EC=3.6.1.13; 8-oxo-dGDP phosphatase; EC=3.6.1.58; Nucleoside diphosphate-linked moiety X motif 5; Nudix motif 5; YSA1H;)
genome : 12,209,573 - 12,237,892 (28,320)
query : 1 - 952 (952/976)
9 exons
identity = 0.991
3'(0.996;1.000;0.955;1.000;1.000;1.000;1.000;
1.000;0.976)5'
coverage = 1.000
EC number :
EC 3.6.1.13
KEGG pathway :
00230 : Purine metabolism (100)
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008645)
HIX0008645
HIT000071957
(
AF155832
)
(ADP-sugar pyrophosphatase; EC=3.6.1.13; 8-oxo-dGDP phosphatase; EC=3.6.1.58; Nucleoside diphosphate-linked moiety X motif 5; Nudix motif 5; YSA1H;)
genome : 12,209,573 - 12,237,891 (28,319)
query : 1 - 950 (950/973)
9 exons
identity = 0.991
3'(0.996;1.000;0.955;1.000;1.000;1.000;1.000;
1.000;0.976)5'
coverage = 1.000
EC number :
EC 3.6.1.13
KEGG pathway :
00230 : Purine metabolism (100)
InterPro :
IPR000086 : NUDIX hydrolase domain
IPR015797 : NUDIX hydrolase domain-like
IPR020084 : NUDIX hydrolase, conserved site
IPR020476 : NUDIX hydrolase
GO :
0016787 : Molecular Function : hydrolase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008645)
HIX0008645
HIT000204550 (
NM_014142
)
(ADP-sugar pyrophosphatase; EC=3.6.1.13; 8-oxo-dGDP phosphatase; EC=3.6.1.58; Nucleoside diphosphate-linked moiety X motif 5; Nudix motif 5; YSA1H;)
genome : 12,209,573 - 12,238,143 (28,571)
query : 1 - 1,204 (1,204/1,224)
9 exons
identity = 0.996
3'(1.000;1.000;0.955;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.6.1.13
KEGG pathway :
00230 : Purine metabolism (100)
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008645)
HIX0008645
HIT000029290
(
BC000025
)
Representative transcript
(ADP-sugar pyrophosphatase; EC=3.6.1.13; 8-oxo-dGDP phosphatase; EC=3.6.1.58; Nucleoside diphosphate-linked moiety X motif 5; Nudix motif 5; YSA1H;)
genome : 12,209,573 - 12,238,054 (28,482)
query : 1 - 1,115 (1,115/1,135)
9 exons
identity = 0.996
3'(1.000;1.000;0.955;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.6.1.13
KEGG pathway :
00230 : Purine metabolism (100)
InterPro :
IPR000086 : NUDIX hydrolase domain
IPR015797 : NUDIX hydrolase domain-like
IPR020084 : NUDIX hydrolase, conserved site
IPR020476 : NUDIX hydrolase
GO :
0016787 : Molecular Function : hydrolase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008645)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK088222
Danio
sp. (Zebrafish) : BC071544
Rattus
sp. (Rat) : BC079176
Bos
sp. (Cow) : BC118134
Pongo
sp. (Orangutan) : CR858136
Gallus
sp. (Chicken) : ENSGALT00000022734
Monodelphis
sp. (Opossum) : ENSMODT00000036639
Tetraodon
sp. (Tetraodon) : GSTENT00013252001
Macaca
sp. (Macaque) : XM_001083539
Equus
sp. (Horse) : XM_001499156
Pan
sp. (Chimpanzee) : XM_507658
Canis
sp. (Dog) : XM_535190
HIX0008645
HIT000360217 (
ENST00000378937
)
(ADP-sugar pyrophosphatase; EC=3.6.1.13; 8-oxo-dGDP phosphatase; EC=3.6.1.58; Nucleoside diphosphate-linked moiety X motif 5; Nudix motif 5; YSA1H;)
genome : 12,209,575 - 12,237,821 (28,247)
query : 1 - 919 (919/919)
10 exons
identity = 0.995
3'(1.000;1.000;0.955;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.6.1.13
KEGG pathway :
00230 : Purine metabolism (100)
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008645)
HIX0008645
HIT000636821 (
ENST00000537776
)
(ADP-sugar pyrophosphatase; EC=3.6.1.13; 8-oxo-dGDP phosphatase; EC=3.6.1.58; Nucleoside diphosphate-linked moiety X motif 5; Nudix motif 5; YSA1H;)
genome : 12,209,576 - 12,238,143 (28,568)
query : 1 - 1,201 (1,201/1,201)
9 exons
identity = 0.996
3'(1.000;1.000;0.955;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.6.1.13
KEGG pathway :
00230 : Purine metabolism (100)
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008645)
HIX0008645
HIT000360232 (
ENST00000378952
)
(ADP-sugar pyrophosphatase.)
genome : 12,209,671 - 12,237,859 (28,189)
query : 1 - 917 (917/917)
10 exons
identity = 0.995
3'(1.000;1.000;0.955;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.6.1.13
KEGG pathway :
00230 : Purine metabolism (100)
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31.5, cyto_nucl 16.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008645)
HIX0008645
HIT000433010
(
AK314144
)
(ADP-sugar pyrophosphatase; EC=3.6.1.13; 8-oxo-dGDP phosphatase; EC=3.6.1.58; Nucleoside diphosphate-linked moiety X motif 5; Nudix motif 5; YSA1H;)
genome : 12,209,701 - 12,238,126 (28,426)
query : 3 - 1,062 (1,060/1,062)
9 exons
identity = 0.994
3'(1.000;1.000;0.955;1.000;1.000;1.000;1.000;
1.000;0.997)5'
coverage = 0.998
EC number :
EC 3.6.1.13
KEGG pathway :
00230 : Purine metabolism (100)
InterPro :
IPR000086 : NUDIX hydrolase domain
IPR015797 : NUDIX hydrolase domain-like
IPR020084 : NUDIX hydrolase, conserved site
IPR020476 : NUDIX hydrolase
GO :
0016787 : Molecular Function : hydrolase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008645)
HIX0008645
HIT000268045
(
CR457195
)
(ADP-sugar pyrophosphatase; EC=3.6.1.13; 8-oxo-dGDP phosphatase; EC=3.6.1.58; Nucleoside diphosphate-linked moiety X motif 5; Nudix motif 5; YSA1H;)
genome : 12,209,701 - 12,228,290 (18,590)
query : 1 - 660 (660/660)
8 exons
identity = 0.991
3'(0.991;1.000;0.955;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
EC number :
EC 3.6.1.13
KEGG pathway :
00230 : Purine metabolism (100)
InterPro :
IPR000086 : NUDIX hydrolase domain
IPR015797 : NUDIX hydrolase domain-like
IPR020084 : NUDIX hydrolase, conserved site
IPR020476 : NUDIX hydrolase
GO :
0016787 : Molecular Function : hydrolase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008645)
HIX0008645
HIT000580654 (
ENST00000476462
)
(ADP-sugar pyrophosphatase.)
genome : 12,209,737 - 12,221,131 (11,395)
query : 1 - 622 (622/622)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.6.1.13
KEGG pathway :
00230 : Purine metabolism (100)
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 27, cyto_nucl 15
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008645)
HIX0008645
HIT000360220 (
ENST00000378940
)
(ADP-sugar pyrophosphatase.)
genome : 12,211,721 - 12,237,868 (26,148)
query : 1 - 1,126 (1,126/1,126)
9 exons
identity = 0.996
3'(1.000;1.000;0.955;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.6.1.13
KEGG pathway :
00230 : Purine metabolism (100)
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008645)
HIX0008645
HIT000360207 (
ENST00000378927
)
(ADP-sugar pyrophosphatase.)
genome : 12,212,231 - 12,237,821 (25,591)
query : 1 - 1,258 (1,258/1,258)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
EC number :
EC 3.6.1.13
KEGG pathway :
00230 : Purine metabolism (100)
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008645)
HIX0008645
HIT000602032 (
ENST00000498825
)
(ADP-sugar pyrophosphatase.)
genome : 12,214,489 - 12,215,812 (1,324)
query : 1 - 473 (473/473)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.6.1.13
KEGG pathway :
00230 : Purine metabolism (100)
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 21, cyto 7.5, cyto_nucl 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008645)
HIX0128059
HIT000463219
(
DQ596688
)
Representative transcript
(Non-protein coding transcript.)
genome : 12,216,733 - 12,216,762 (30)
query : 1 - 30 (30/31)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 0.968
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0128059)
HIX0008645
HIT000542666 (
ENST00000444732
)
(ADP-sugar pyrophosphatase.)
genome : 12,219,842 - 12,237,844 (18,003)
query : 1 - 410 (410/410)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.6.1.13
KEGG pathway :
00230 : Purine metabolism (100)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 24.5, cyto_nucl 14, extr 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008645)
HIX0218798
HIT000527192 (
ENST00000429258
)
(Cell division cycle protein 123 family protein.)
genome : 12,237,964 - 12,272,977 (35,014)
query : 1 - 550 (550/550)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 11, cyto_nucl 9, nucl 8.5, cyto 6.5, mito 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0218798)
HIX0218798
HIT000427656
(
AK308790
)
Representative transcript
(Cell division cycle protein 123 family protein.)
genome : 12,238,187 - 12,258,491 (20,305)
query : 1 - 1,048 (1,048/1,048)
5 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;0.999)3'
coverage = 1.000
InterPro :
IPR009772 : Cell division cycle protein 123
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15, cyto_nucl 12, mito 9, E.R._mito 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0218798)
HIX0218798
HIT000571638 (
ENST00000467016
)
(Cell division cycle protein 123 family protein.)
genome : 12,238,195 - 12,240,875 (2,681)
query : 1 - 296 (296/296)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 23, mito 4, extr 3, mito_nucl 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0218798)
HIX0218798
HIT000539984 (
ENST00000442050
)
(Cell division cycle protein 123 family protein.)
genome : 12,238,231 - 12,279,223 (40,993)
query : 1 - 564 (564/564)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, cyto_nucl 11.5, extr 6, nucl 5, mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0218798)
HIX0218798
HIT000601955 (
ENST00000498747
)
(Cell division cycle protein 123 family protein.)
genome : 12,259,413 - 12,292,528 (33,116)
query : 1 - 890 (890/890)
9 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20, cyto_nucl 10.8333, cyto_plas 10.8333,
extr 10
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0218798)
HIX0218798
HIT000538547 (
ENST00000440613
)
(Cell division cycle protein 123 family protein.)
genome : 12,272,947 - 12,292,588 (19,642)
query : 1 - 685 (685/685)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14, extr 9, cyto_nucl 8.83333, cyto_plas 7.83333,
cysk 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0218798)
HIX0209411
HIT000710724 (
ENST00000598961
)
(Conserved hypothetical protein.)
genome : 12,286,750 - 12,288,157 (1,408)
query : 1 - 877 (877/877)
2 exons
identity = 0.998
3'(1.000;0.993)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 13, nucl 13, cyto_nucl 11.5, cyto 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0209411)
HIX0218798
HIT000007199
(
AK023925
)
(Conserved hypothetical protein.)
genome : 12,287,627 - 12,290,000 (2,374)
query : 1 - 2,067 (2,067/2,067)
2 exons
identity = 0.991
5'(0.995;0.983)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, cyto_nucl 8.33333, cyto 8, extr_plas 8
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0218798)
HIX0209411
HIT000519591 (
ENST00000421657
)
(Conserved hypothetical protein.)
genome : 12,287,627 - 12,289,844 (2,218)
query : 1 - 1,914 (1,914/1,914)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 14, extr 11, cyto 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0209411)
HIX0218798
HIT000601210 (
ENST00000497963
)
(Cell division cycle protein 123 family protein.)
genome : 12,288,053 - 12,292,318 (4,266)
query : 1 - 963 (963/963)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 28, mito 1, E.R. 1, pero 1, lyso 1, E.R._mito 1,
mito_pero 1
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0218798)
HIX0025908
HIT000360127 (
ENST00000378847
)
(Calcium/calmodulin-dependent protein kinase type 1D; EC=2.7.11.17; CaM kinase I delta; CaM kinase ID; CaM-KI delta; CaMKI delta; CaMKID; CaMKI-like protein kinase; CKLiK;)
genome : 12,391,481 - 12,877,545 (486,065)
query : 1 - 8,154 (8,154/8,154)
11 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.7.11.17
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 15.5, cyto_mito 9, nucl 6, plas 4.5,
extr_plas 3.5, pero 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0025908)
HIX0025908
HIT000422190
(
AK289393
)
(Calcium/calmodulin-dependent protein kinase type 1D isoform 1.)
genome : 12,391,541 - 12,867,992 (476,452)
query : 1 - 1,429 (1,429/1,429)
11 exons
identity = 0.999
5'(1.000;1.000;0.992;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.7.11.17
InterPro :
IPR002290 : Serine/threonine/dual specificity protein kinase, catalytic domain
IPR008271 : Serine/threonine-protein kinase, active site
IPR020636 : Calcium/calmodulin-dependent/calcium-dependent protein kinase
GO :
0004672 : Molecular Function : protein kinase activity
0004674 : Molecular Function : protein serine/threonine kinase activity
0005524 : Molecular Function : ATP binding
0006468 : Biological Process : protein phosphorylation
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 20, nucl 4, pero 3, extr_plas 2, mito_pero 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0025908)
HIX0025908
HIT000214372 (
NM_153498
)
(Calcium/calmodulin-dependent protein kinase type 1D; EC=2.7.11.17; CaM kinase I delta; CaM kinase ID; CaM-KI delta; CaMKI delta; CaMKID; CaMKI-like protein kinase; CKLiK;)
genome : 12,391,583 - 12,871,735 (480,153)
query : 1 - 2,242 (2,242/2,242)
11 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.7.11.17
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 15.5, cyto_mito 9, nucl 6, plas 4.5,
extr_plas 3.5, pero 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0025908)
HIX0025908
HIT000207908 (
NM_020397
)
(Calcium/calmodulin-dependent protein kinase type 1D isoform 1.)
genome : 12,391,583 - 12,868,142 (476,560)
query : 1 - 1,727 (1,727/1,727)
10 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.7.11.17
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 20, nucl 4, pero 3, extr_plas 2, mito_pero 2
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0025908)
HIX0025908
HIT000061385
(
AB081726
)
Representative transcript
(Calcium/calmodulin-dependent protein kinase type 1D; EC=2.7.11.17; CaM kinase I delta; CaM kinase ID; CaM-KI delta; CaMKI delta; CaMKID; CaMKI-like protein kinase; CKLiK;)
genome : 12,391,586 - 12,871,731 (480,146)
query : 1 - 2,235 (2,235/2,235)
11 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.992;0.998)3'
coverage = 1.000
EC number :
EC 2.7.11.17
InterPro :
IPR002290 : Serine/threonine/dual specificity protein kinase, catalytic domain
IPR008271 : Serine/threonine-protein kinase, active site
IPR020636 : Calcium/calmodulin-dependent/calcium-dependent protein kinase
GO :
0004672 : Molecular Function : protein kinase activity
0004674 : Molecular Function : protein serine/threonine kinase activity
0005524 : Molecular Function : ATP binding
0006468 : Biological Process : protein phosphorylation
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 15.5, cyto_mito 9, nucl 6, plas 4.5,
extr_plas 3.5, pero 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0025908)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK147616
Danio
sp. (Zebrafish) : BC160632
Bos
sp. (Cow) : ENSBTAT00000011406
Equus
sp. (Horse) : ENSECAT00000020563
Oryzias
sp. (Medaka) : ENSORLT00000004924
Pongo
sp. (Orangutan) : ENSPPYT00000002503
Rattus
sp. (Rat) : ENSRNOT00000024099
Tetraodon
sp. (Tetraodon) : GSTENT00029739001
Takifugu
sp. (Fugu) : SINFRUT00000128569
Macaca
sp. (Macaque) : XM_001086213
Pan
sp. (Chimpanzee) : XM_001138401
Monodelphis
sp. (Opossum) : XM_001363611
Canis
sp. (Dog) : XM_844395
Gallus
sp. (Chicken) : XR_026974
HIX0025908
HIT000591392 (
ENST00000487696
)
(Calcium/calmodulin-dependent protein kinase type 1B isoform b.)
genome : 12,391,651 - 12,708,948 (317,298)
query : 1 - 473 (473/473)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.7.11.17
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 15.6667, cyto 14.5, nucl 9.5,
cyto_plas 9.33333, extr 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0025908)
HIX0025908
HIT000051497
(
BC035745
)
(Calcium/calmodulin-dependent protein kinase type 1D; EC=2.7.11.17; CaM kinase I delta; CaM kinase ID; CaM-KI delta; CaMKI delta; CaMKID; CaMKI-like protein kinase; CKLiK;)
genome : 12,391,725 - 12,871,406 (479,682)
query : 1 - 1,770 (1,770/1,800)
11 exons
identity = 0.998
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.992;0.997)3'
coverage = 1.000
EC number :
EC 2.7.11.17
InterPro :
IPR002290 : Serine/threonine/dual specificity protein kinase, catalytic domain
IPR008271 : Serine/threonine-protein kinase, active site
IPR020636 : Calcium/calmodulin-dependent/calcium-dependent protein kinase
GO :
0004672 : Molecular Function : protein kinase activity
0004674 : Molecular Function : protein serine/threonine kinase activity
0005524 : Molecular Function : ATP binding
0006468 : Biological Process : protein phosphorylation
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 15.5, cyto_mito 9, nucl 6, plas 4.5,
extr_plas 3.5, pero 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0025908)
HIX0025908
HIT000076307
(
AF286366
)
(Calcium/calmodulin-dependent protein kinase type 1D isoform 1.)
genome : 12,391,732 - 12,868,142 (476,411)
query : 2 - 1,579 (1,578/1,579)
10 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.996)3'
coverage = 0.999
EC number :
EC 2.7.11.17
InterPro :
IPR002290 : Serine/threonine/dual specificity protein kinase, catalytic domain
IPR008271 : Serine/threonine-protein kinase, active site
IPR020636 : Calcium/calmodulin-dependent/calcium-dependent protein kinase
GO :
0004672 : Molecular Function : protein kinase activity
0004674 : Molecular Function : protein serine/threonine kinase activity
0005524 : Molecular Function : ATP binding
0006468 : Biological Process : protein phosphorylation
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 20, nucl 4, pero 3, extr_plas 2, mito_pero 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0025908)
HIX0025908
HIT000360125 (
ENST00000378845
)
(Calcium/calmodulin-dependent protein kinase type 1D isoform 1.)
genome : 12,391,732 - 12,868,142 (476,411)
query : 1 - 1,578 (1,578/1,578)
10 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.7.11.17
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 20, nucl 4, pero 3, extr_plas 2, mito_pero 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0025908)
HIX0209475
HIT000616032 (
ENST00000516629
)
(Non-protein coding transcript.)
genome : 12,457,927 - 12,457,999 (73)
query : 1 - 73 (73/73)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0209475)
HIX0209470
HIT000615712 (
ENST00000516309
)
(Hypothetical short protein.)
genome : 12,498,482 - 12,498,630 (149)
query : 1 - 149 (149/149)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0209470)
HIX0218945
HIT000694383 (
ENST00000582492
)
(Non-protein coding transcript.)
genome : 12,620,752 - 12,620,822 (71)
query : 1 - 71 (71/71)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0218945)
HIX0218945
HIT000725763 (
NR_039700
)
(Non-protein coding transcript.)
genome : 12,620,752 - 12,620,822 (71)
query : 1 - 71 (71/71)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0218945)
HIX0025908
HIT000563416 (
NR_027322
)
(Hypothetical protein.)
genome : 12,875,133 - 12,877,545 (2,413)
query : 1 - 2,413 (2,413/2,427)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 19, nucl 8, cyto 4
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0025908)
HIX0025908
HIT000264950
(
BC073155
)
(Hypothetical protein.)
genome : 12,876,003 - 12,877,545 (1,543)
query : 91 - 1,633 (1,543/1,647)
1 exon
identity = 0.998
5'(0.998)3'
coverage = 0.945
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 19, nucl 8, cyto 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0025908)
HIX0008649
HIT000022231
(
AK097377
)
Representative transcript
(Hypothetical protein.)
genome : 12,875,973 - 12,877,544 (1,572)
query : 1 - 1,572 (1,572/1,572)
1 exon
identity = 0.999
3'(0.999)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 23, cyto 4, nucl 3, cyto_golg 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008649)
HIX0021962
HIT000025158
(
AL136562
)
(Coiled-coil domain-containing protein 3; Fat/vessel-derived secretory protein; Favine; Precursor;)
genome : 12,938,627 - 13,043,620 (104,994)
query : 1 - 2,651 (2,651/2,671)
3 exons
identity = 0.999
3'(0.999;1.000;1.000)5'
coverage = 0.999
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 22, mito 6, cyto 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021962)
HIX0021962
HIT000242833
(
AF190154
)
(Hypothetical protein.)
genome : 12,938,626 - 12,939,922 (1,297)
query : 5 - 1,298 (1,294/1,316)
1 exon
identity = 0.991
3'(0.991)5'
coverage = 0.997
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22, extr 3, nucl 3, cysk 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021962)
HIX0021962
HIT000053629
(
BC051334
)
Representative transcript
(Coiled-coil domain-containing protein 3; Fat/vessel-derived secretory protein; Favine; Precursor;)
genome : 12,938,626 - 13,043,704 (105,079)
query : 1 - 2,736 (2,736/2,753)
3 exons
identity = 0.999
3'(0.999;1.000;0.998)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 22, mito 6, cyto 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021962)
HIX0021962
HIT000210190 (
NM_031455
)
(Conserved hypothetical protein.)
genome : 12,938,626 - 13,043,704 (105,079)
query : 1 - 2,736 (2,736/2,753)
3 exons
identity = 0.999
3'(0.999;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 22, mito 6, cyto 2
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021962)
HIX0021962
HIT000007852
(
AK024578
)
(Hypothetical protein.)
genome : 12,938,626 - 12,940,345 (1,720)
query : 1 - 1,719 (1,719/1,735)
1 exon
identity = 0.999
3'(0.999)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17, cyto_nucl 13.5, nucl 6, mito 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021962)
HIX0021962
HIT000020647
(
AK095792
)
(Coiled-coil domain-containing protein 3 precursor.)
genome : 12,938,627 - 13,141,652 (203,026)
query : 1 - 3,178 (3,178/3,178)
7 exons
identity = 0.997
3'(0.996;1.000;1.000;1.000;1.000;1.000;0.993)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18.5, cyto_nucl 14.5, nucl 7.5, extr 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021962)
HIX0021962
HIT000360119 (
ENST00000378839
)
(Conserved hypothetical protein.)
genome : 12,938,627 - 13,141,652 (203,026)
query : 1 - 3,180 (3,180/3,180)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18.5, cyto_nucl 14.5, nucl 7.5, extr 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021962)
HIX0021962
HIT000360105 (
ENST00000378825
)
(Conserved hypothetical protein.)
genome : 12,938,627 - 13,043,697 (105,071)
query : 1 - 2,729 (2,729/2,729)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 22, mito 6, cyto 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021962)
HIX0021962
HIT000043266
(
AK123393
)
(Conserved hypothetical protein.)
genome : 12,938,627 - 12,941,503 (2,877)
query : 1 - 2,876 (2,876/2,876)
1 exon
identity = 0.998
3'(0.998)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 23, cyto 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021962)
HIX0021962
HIT000044068
(
AK124195
)
(Conserved hypothetical protein.)
genome : 12,938,627 - 12,941,065 (2,439)
query : 1 - 2,438 (2,438/2,438)
1 exon
identity = 0.998
3'(0.998)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17, cyto_nucl 13.5, nucl 6, mito 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021962)
HIX0021962
HIT000426170
(
AK307304
)
(Conserved hypothetical protein.)
genome : 12,939,957 - 13,091,907 (151,951)
query : 1 - 1,036 (1,036/1,036)
3 exons
identity = 0.997
3'(0.997;0.987;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 14, nucl 13, cyto 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021962)
HIX0021962
HIT000426069
(
AK307203
)
(Coiled-coil domain-containing protein 3 precursor.)
genome : 12,940,270 - 13,141,707 (201,438)
query : 2 - 885 (884/885)
3 exons
identity = 0.995
3'(0.995;0.993;1.000)5'
coverage = 0.999
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 16, nucl 7, extr 5, cyto 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021962)
HIX0021962
HIT000430324
(
AK311458
)
(Hypothetical short protein.)
genome : 13,048,111 - 13,141,713 (93,603)
query : 1 - 969 (969/969)
6 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;0.996;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 27, mito 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021962)
HIX0171004
HIT000539082 (
ENST00000441148
)
(Ribosomal protein L18/L5 family protein.)
genome : 13,099,902 - 13,100,676 (775)
query : 1 - 775 (775/775)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, cyto 9, cyto_nucl 8, nucl 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0171004)
HIX0008651
HIT000108716 (
ENST00000263036
)
(Optineurin; E3-14.7K-interacting protein; FIP-2; Huntingtin yeast partner L; Huntingtin-interacting protein 7; HIP-7; Huntingtin-interacting protein L; NEMO-related protein; Optic neuropathy-inducing protein; Transcription factor IIIA-interacting protein; TFIIIA-IntP;)
genome : 13,141,449 - 13,180,308 (38,860)
query : 1 - 3,849 (3,849/3,849)
15 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, cyto_nucl 15.1667, nucl 12,
cyto_golg 11.1667
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008651)
HIX0008651
HIT000012017
(
AK055403
)
(Optineurin; E3-14.7K-interacting protein; FIP-2; Huntingtin yeast partner L; Huntingtin-interacting protein 7; HIP-7; Huntingtin-interacting protein L; NEMO-related protein; Optic neuropathy-inducing protein; Transcription factor IIIA-interacting protein; TFIIIA-IntP;)
genome : 13,141,449 - 13,178,923 (37,475)
query : 1 - 2,464 (2,464/2,464)
15 exons
identity = 0.998
5'(1.000;0.993;1.000;1.000;1.000;1.000;1.000;
1.000;0.991;1.000;0.989;1.000;1.000;1.000;
0.994)3'
coverage = 1.000
InterPro :
IPR021063 : NF-kappa-B essential modulator NEMO, N-terminal
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, cyto_nucl 15.1667, nucl 12,
cyto_golg 11.1667
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008651)
HIX0008651
HIT000360044 (
ENST00000378764
)
(Optineurin; E3-14.7K-interacting protein; FIP-2; Huntingtin yeast partner L; Huntingtin-interacting protein 7; HIP-7; Huntingtin-interacting protein L; NEMO-related protein; Optic neuropathy-inducing protein; Transcription factor IIIA-interacting protein; TFIIIA-IntP;)
genome : 13,141,582 - 13,180,291 (38,710)
query : 1 - 3,681 (3,681/3,681)
15 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16.5, cyto_nucl 15.6667, nucl 11.5,
cyto_golg 11.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008651)
HIX0008651
HIT000208527 (
NM_021980
)
(Optineurin; E3-14.7K-interacting protein; FIP-2; Huntingtin yeast partner L; Huntingtin-interacting protein 7; HIP-7; Huntingtin-interacting protein L; NEMO-related protein; Optic neuropathy-inducing protein; Transcription factor IIIA-interacting protein; TFIIIA-IntP;)
genome : 13,142,082 - 13,180,276 (38,195)
query : 1 - 3,376 (3,376/3,376)
14 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.991;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, cyto_nucl 15.1667, nucl 12,
cyto_golg 11.1667
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008651)
HIX0008651
HIT000316480 (
NM_001008211
)
(Optineurin; E3-14.7K-interacting protein; FIP-2; Huntingtin yeast partner L; Huntingtin-interacting protein 7; HIP-7; Huntingtin-interacting protein L; NEMO-related protein; Optic neuropathy-inducing protein; Transcription factor IIIA-interacting protein; TFIIIA-IntP;)
genome : 13,142,082 - 13,180,276 (38,195)
query : 1 - 3,597 (3,597/3,597)
16 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.991;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, cyto_nucl 15.1667, nucl 12,
cyto_golg 11.1667
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008651)
HIX0008651
HIT000316481 (
NM_001008212
)
(Optineurin; E3-14.7K-interacting protein; FIP-2; Huntingtin yeast partner L; Huntingtin-interacting protein 7; HIP-7; Huntingtin-interacting protein L; NEMO-related protein; Optic neuropathy-inducing protein; Transcription factor IIIA-interacting protein; TFIIIA-IntP;)
genome : 13,142,082 - 13,180,276 (38,195)
query : 1 - 3,528 (3,528/3,528)
15 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.991;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, cyto_nucl 15.1667, nucl 12,
cyto_golg 11.1667
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008651)
HIX0008651
HIT000316482 (
NM_001008213
)
(Optineurin; E3-14.7K-interacting protein; FIP-2; Huntingtin yeast partner L; Huntingtin-interacting protein 7; HIP-7; Huntingtin-interacting protein L; NEMO-related protein; Optic neuropathy-inducing protein; Transcription factor IIIA-interacting protein; TFIIIA-IntP;)
genome : 13,142,082 - 13,180,276 (38,195)
query : 1 - 3,582 (3,582/3,582)
16 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.991;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, cyto_nucl 15.1667, nucl 12,
cyto_golg 11.1667
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008651)
HIX0008651
HIT000499784
(
AK316171
)
(Optineurin.)
genome : 13,142,136 - 13,179,124 (36,989)
query : 1 - 2,264 (2,264/2,264)
14 exons
identity = 0.998
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.991;1.000;1.000;1.000;0.992;1.000;0.992)3'
coverage = 1.000
InterPro :
IPR021063 : NF-kappa-B essential modulator NEMO, N-terminal
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 16.1667, nucl 13.5, cyto 13.5,
cyto_golg 9.66667
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008651)
HIX0008651
HIT000498339
(
AK303715
)
(Optineurin.)
genome : 13,142,158 - 13,179,124 (36,967)
query : 1 - 2,242 (2,242/2,242)
14 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.991;1.000;1.000;1.000;1.000;1.000;0.997)3'
coverage = 1.000
InterPro :
IPR021063 : NF-kappa-B essential modulator NEMO, N-terminal
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 15.1667, nucl 14, cyto 12,
cyto_golg 8.83333, golg 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008651)
HIX0008651
HIT000591611 (
ENST00000487935
)
(Optineurin; E3-14.7K-interacting protein; FIP-2; Huntingtin yeast partner L; Huntingtin-interacting protein 7; HIP-7; Huntingtin-interacting protein L; NEMO-related protein; Optic neuropathy-inducing protein; Transcription factor IIIA-interacting protein; TFIIIA-IntP;)
genome : 13,142,159 - 13,151,662 (9,504)
query : 1 - 511 (511/511)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 21, nucl 5, cyto 5, cyto_nucl 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008651)
HIX0008651
HIT000041711
(
BC032762
)
(Optineurin; E3-14.7K-interacting protein; FIP-2; Huntingtin yeast partner L; Huntingtin-interacting protein 7; HIP-7; Huntingtin-interacting protein L; NEMO-related protein; Optic neuropathy-inducing protein; Transcription factor IIIA-interacting protein; TFIIIA-IntP;)
genome : 13,142,173 - 13,179,292 (37,120)
query : 12 - 2,500 (2,489/2,514)
16 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.991;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 0.996
InterPro :
IPR021063 : NF-kappa-B essential modulator NEMO, N-terminal
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16.5, cyto_nucl 15.6667, nucl 11.5,
cyto_golg 11.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008651)
HIX0008651
HIT000586090 (
ENST00000482140
)
(Optineurin; E3-14.7K-interacting protein; FIP-2; Huntingtin yeast partner L; Huntingtin-interacting protein 7; HIP-7; Huntingtin-interacting protein L; NEMO-related protein; Optic neuropathy-inducing protein; Transcription factor IIIA-interacting protein; TFIIIA-IntP;)
genome : 13,142,163 - 13,160,980 (18,818)
query : 1 - 667 (667/667)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14.5, cyto_nucl 13.5, nucl 11.5, extr 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008651)
HIX0008651
HIT000360037 (
ENST00000378757
)
(Optineurin; E3-14.7K-interacting protein; FIP-2; Huntingtin yeast partner L; Huntingtin-interacting protein 7; HIP-7; Huntingtin-interacting protein L; NEMO-related protein; Optic neuropathy-inducing protein; Transcription factor IIIA-interacting protein; TFIIIA-IntP;)
genome : 13,142,169 - 13,180,291 (38,123)
query : 1 - 3,304 (3,304/3,304)
14 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, cyto_nucl 15.1667, nucl 12,
cyto_golg 11.1667
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008651)
HIX0008651
HIT000036383
(
BC013876
)
(Optineurin; E3-14.7K-interacting protein; FIP-2; Huntingtin yeast partner L; Huntingtin-interacting protein 7; HIP-7; Huntingtin-interacting protein L; NEMO-related protein; Optic neuropathy-inducing protein; Transcription factor IIIA-interacting protein; TFIIIA-IntP;)
genome : 13,142,169 - 13,179,284 (37,116)
query : 1 - 2,297 (2,297/2,318)
14 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.991;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR021063 : NF-kappa-B essential modulator NEMO, N-terminal
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, cyto_nucl 15.1667, nucl 12,
cyto_golg 11.1667
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008651)
HIX0008651
HIT000360028 (
ENST00000378748
)
(Optineurin; E3-14.7K-interacting protein; FIP-2; Huntingtin yeast partner L; Huntingtin-interacting protein 7; HIP-7; Huntingtin-interacting protein L; NEMO-related protein; Optic neuropathy-inducing protein; Transcription factor IIIA-interacting protein; TFIIIA-IntP;)
genome : 13,142,173 - 13,180,291 (38,119)
query : 1 - 3,521 (3,521/3,521)
16 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, cyto_nucl 15.1667, nucl 12,
cyto_golg 11.1667
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008651)
HIX0008651
HIT000360032 (
ENST00000378752
)
(Optineurin; E3-14.7K-interacting protein; FIP-2; Huntingtin yeast partner L; Huntingtin-interacting protein 7; HIP-7; Huntingtin-interacting protein L; NEMO-related protein; Optic neuropathy-inducing protein; Transcription factor IIIA-interacting protein; TFIIIA-IntP;)
genome : 13,142,173 - 13,180,291 (38,119)
query : 1 - 3,488 (3,488/3,488)
16 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16.5, cyto_nucl 15.6667, nucl 11.5,
cyto_golg 11.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008651)
HIX0008651
HIT000528015 (
ENST00000430081
)
(Optineurin; E3-14.7K-interacting protein; FIP-2; Huntingtin yeast partner L; Huntingtin-interacting protein 7; HIP-7; Huntingtin-interacting protein L; NEMO-related protein; Optic neuropathy-inducing protein; Transcription factor IIIA-interacting protein; TFIIIA-IntP;)
genome : 13,142,173 - 13,158,327 (16,155)
query : 1 - 848 (848/848)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 24.5, cyto_nucl 13.5, extr 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008651)
HIX0008651
HIT000064945
(
AF061034
)
(Optineurin; E3-14.7K-interacting protein; FIP-2; Huntingtin yeast partner L; Huntingtin-interacting protein 7; HIP-7; Huntingtin-interacting protein L; NEMO-related protein; Optic neuropathy-inducing protein; Transcription factor IIIA-interacting protein; TFIIIA-IntP;)
genome : 13,142,210 - 13,178,920 (36,711)
query : 1 - 2,114 (2,114/2,139)
16 exons
identity = 0.997
5'(1.000;1.000;0.982;1.000;1.000;1.000;0.986;
0.980;1.000;0.991;0.993;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 0.999
InterPro :
IPR021063 : NF-kappa-B essential modulator NEMO, N-terminal
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, cyto_nucl 15.1667, nucl 12,
cyto_golg 11.1667
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008651)
HIX0008651
HIT000360027 (
ENST00000378747
)
(Optineurin; E3-14.7K-interacting protein; FIP-2; Huntingtin yeast partner L; Huntingtin-interacting protein 7; HIP-7; Huntingtin-interacting protein L; NEMO-related protein; Optic neuropathy-inducing protein; Transcription factor IIIA-interacting protein; TFIIIA-IntP;)
genome : 13,142,225 - 13,180,291 (38,067)
query : 1 - 3,400 (3,400/3,400)
15 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, cyto_nucl 15.1667, nucl 12,
cyto_golg 11.1667
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008651)
HIX0008651
HIT000079383
(
AF420371
)
Representative transcript
(Optineurin; E3-14.7K-interacting protein; FIP-2; Huntingtin yeast partner L; Huntingtin-interacting protein 7; HIP-7; Huntingtin-interacting protein L; NEMO-related protein; Optic neuropathy-inducing protein; Transcription factor IIIA-interacting protein; TFIIIA-IntP;)
genome : 13,142,225 - 13,178,899 (36,675)
query : 1 - 2,077 (2,077/2,077)
16 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.991;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
InterPro :
IPR021063 : NF-kappa-B essential modulator NEMO, N-terminal
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, cyto_nucl 15.1667, nucl 12,
cyto_golg 11.1667
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008651)
Ortholog candidate ( ->
Evola
)
Macaca
sp. (Macaque) : AB056409
Gallus
sp. (Chicken) : AF380358
Mus
sp. (Mouse) : BC061185
Danio
sp. (Zebrafish) : BC063986
Rattus
sp. (Rat) : BC086976
Bos
sp. (Cow) : BC102937
Pongo
sp. (Orangutan) : CR859573
Tetraodon
sp. (Tetraodon) : GSTENT00013257001
Takifugu
sp. (Fugu) : SINFRUT00000172035
Pan
sp. (Chimpanzee) : XM_001139979
Monodelphis
sp. (Opossum) : XM_001368261
Equus
sp. (Horse) : XM_001498946
Canis
sp. (Dog) : XM_852414
HIX0008651
HIT000079384
(
AF420372
)
(Optineurin; E3-14.7K-interacting protein; FIP-2; Huntingtin yeast partner L; Huntingtin-interacting protein 7; HIP-7; Huntingtin-interacting protein L; NEMO-related protein; Optic neuropathy-inducing protein; Transcription factor IIIA-interacting protein; TFIIIA-IntP;)
genome : 13,142,225 - 13,178,899 (36,675)
query : 1 - 1,856 (1,856/1,856)
14 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.991;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR021063 : NF-kappa-B essential modulator NEMO, N-terminal
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, cyto_nucl 15.1667, nucl 12,
cyto_golg 11.1667
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008651)
HIX0008651
HIT000079385
(
AF420373
)
(Optineurin; E3-14.7K-interacting protein; FIP-2; Huntingtin yeast partner L; Huntingtin-interacting protein 7; HIP-7; Huntingtin-interacting protein L; NEMO-related protein; Optic neuropathy-inducing protein; Transcription factor IIIA-interacting protein; TFIIIA-IntP;)
genome : 13,142,225 - 13,178,899 (36,675)
query : 1 - 2,008 (2,008/2,008)
15 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.991;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
InterPro :
IPR021063 : NF-kappa-B essential modulator NEMO, N-terminal
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, cyto_nucl 15.1667, nucl 12,
cyto_golg 11.1667
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008651)
HIX0171216
HIT000553937 (
ENST00000456003
)
(Ribonucleoprotein LSM domain containing protein.)
genome : 13,146,574 - 13,146,793 (220)
query : 1 - 220 (220/220)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 24, cyto_nucl 17.5, nucl 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0171216)
HIX0008651
HIT000590593 (
ENST00000486862
)
(Optineurin;)
genome : 13,154,487 - 13,158,540 (4,054)
query : 1 - 423 (423/423)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 21, cyto 7.5, cyto_nucl 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008651)
HIX0008651
HIT000522548 (
ENST00000424614
)
(Optineurin; E3-14.7K-interacting protein; FIP-2; Huntingtin yeast partner L; Huntingtin-interacting protein 7; HIP-7; Huntingtin-interacting protein L; NEMO-related protein; Optic neuropathy-inducing protein; Transcription factor IIIA-interacting protein; TFIIIA-IntP;)
genome : 13,158,268 - 13,165,198 (6,931)
query : 1 - 664 (664/664)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22, cyto_nucl 13, extr 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008651)
HIX0008651
HIT000042619
(
AK122746
)
(Optineurin.)
genome : 13,165,366 - 13,178,920 (13,555)
query : 1 - 1,913 (1,913/1,913)
6 exons
identity = 0.999
5'(0.999;0.998;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22.5, cyto_nucl 13.5, extr 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008651)
HIX0008651
HIT000064191
(
AF049614
)
(Optineurin; E3-14.7K-interacting protein; FIP-2; Huntingtin yeast partner L; Huntingtin-interacting protein 7; HIP-7; Huntingtin-interacting protein L; NEMO-related protein; Optic neuropathy-inducing protein; Transcription factor IIIA-interacting protein; TFIIIA-IntP;)
genome : 13,169,743 - 13,178,798 (9,056)
query : 10 - 435 (426/435)
4 exons
identity = 0.998
5'(0.994;1.000;1.000;1.000)3'
coverage = 0.979
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17, cyto_nucl 17, nucl 11
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008651)
HIX0008651
HIT000573562 (
ENST00000469025
)
(Optineurin; E3-14.7K-interacting protein; FIP-2; Huntingtin yeast partner L; Huntingtin-interacting protein 7; HIP-7; Huntingtin-interacting protein L; NEMO-related protein; Optic neuropathy-inducing protein; Transcription factor IIIA-interacting protein; TFIIIA-IntP;)
genome : 13,173,319 - 13,178,918 (5,600)
query : 1 - 642 (642/642)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17.5, cyto_nucl 15.5, nucl 6.5, extr 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008651)
HIX0008651
HIT000065700
(
AF070533
)
(Conserved hypothetical protein.)
genome : 13,178,816 - 13,180,288 (1,473)
query : 1 - 1,473 (1,473/1,500)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 25, cyto 3.5, cyto_nucl 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008651)
HIX0171026
HIT000540255 (
ENST00000442321
)
(Conserved hypothetical protein.)
genome : 13,181,196 - 13,181,533 (338)
query : 1 - 338 (338/338)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 25, extr 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0171026)
HIX0171034
HIT000540834 (
ENST00000442900
)
(Conserved hypothetical protein.)
genome : 13,184,185 - 13,184,977 (793)
query : 1 - 793 (793/793)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 20, mito 7, cyto 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0171034)
HIX0171100
HIT000545187 (
ENST00000447253
)
(Conserved hypothetical protein.)
genome : 13,198,684 - 13,200,136 (1,453)
query : 1 - 1,453 (1,453/1,453)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 15, extr 12, mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0171100)
HIX0170698
HIT000516550 (
ENST00000418616
)
(Ribosomal protein L44e family protein.)
genome : 13,201,477 - 13,201,777 (301)
query : 1 - 301 (301/301)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, cyto 9, nucl 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0170698)
HIX0201483
HIT000207298 (
NM_018518
)
(Protein MCM10 homolog; HsMCM10;)
genome : 13,203,554 - 13,253,103 (49,550)
query : 1 - 4,546 (4,546/4,559)
20 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 21.5, cyto_nucl 16, cyto 9.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201483)
HIX0201483
HIT000318778 (
NM_182751
)
(Protein MCM10 homolog; HsMCM10;)
genome : 13,203,554 - 13,253,103 (49,550)
query : 1 - 4,549 (4,549/4,562)
20 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 21.5, cyto_nucl 16, cyto 9.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201483)
HIX0201483
HIT000359994 (
ENST00000378714
)
(Protein MCM10 homolog; HsMCM10;)
genome : 13,203,554 - 13,253,104 (49,551)
query : 1 - 4,547 (4,547/4,547)
20 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 21.5, cyto_nucl 16, cyto 9.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201483)
HIX0201483
HIT000425498
(
AK292701
)
Representative transcript
(Protein MCM10 homolog; HsMCM10;)
genome : 13,203,579 - 13,251,736 (48,158)
query : 1 - 3,157 (3,157/3,157)
20 exons
identity = 0.999
5'(1.000;1.000;1.000;0.990;1.000;1.000;1.000;
1.000;1.000;0.995;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR015408 : Zinc finger, Mcm10/DnaG-type
IPR015411 : Replication factor Mcm10
GO :
0005634 : Cellular Component : nucleus
0006260 : Biological Process : DNA replication
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 21.5, cyto_nucl 16, cyto 9.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201483)
Ortholog candidate ( ->
Evola
)
Danio
sp. (Zebrafish) : BC093413
Mus
sp. (Mouse) : BC094576
Gallus
sp. (Chicken) : CR388558
Canis
sp. (Dog) : ENSCAFT00000007657
Pongo
sp. (Orangutan) : ENSPPYT00000002507
Tetraodon
sp. (Tetraodon) : GSTENT00013259001
Takifugu
sp. (Fugu) : SINFRUT00000180393
Rattus
sp. (Rat) : XM_001071383
Macaca
sp. (Macaque) : XM_001085751
Pan
sp. (Chimpanzee) : XM_001140870
Monodelphis
sp. (Opossum) : XM_001368302
Equus
sp. (Horse) : XM_001499049
HIX0201483
HIT000588631 (
ENST00000484800
)
(Protein MCM10 homolog; HsMCM10;)
genome : 13,203,579 - 13,251,736 (48,158)
query : 1 - 3,157 (3,157/3,157)
20 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 21.5, cyto_nucl 16, cyto 9.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201483)
HIX0201483
HIT000583718 (
ENST00000479669
)
(Protein MCM10 homolog isoform 2.)
genome : 13,203,579 - 13,214,474 (10,896)
query : 1 - 469 (469/469)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 12.5, cyto_nucl 12.5, cyto 11.5, extr 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201483)
HIX0201483
HIT000012309
(
AK055695
)
(Protein MCM10 homolog isoform 1.)
genome : 13,203,581 - 13,239,685 (36,105)
query : 1 - 2,141 (2,141/2,141)
15 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;0.993;1.000;0.994;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
InterPro :
IPR015408 : Zinc finger, Mcm10/DnaG-type
IPR015411 : Replication factor Mcm10
GO :
0005634 : Cellular Component : nucleus
0006260 : Biological Process : DNA replication
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 22.5, cyto_nucl 16, cyto 8.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201483)
HIX0201483
HIT000337078
(
BC101727
)
(Protein MCM10 homolog; HsMCM10;)
genome : 13,203,585 - 13,251,348 (47,764)
query : 1 - 2,763 (2,763/2,763)
20 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.993;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR015408 : Zinc finger, Mcm10/DnaG-type
IPR015411 : Replication factor Mcm10
GO :
0005634 : Cellular Component : nucleus
0006260 : Biological Process : DNA replication
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 21.5, cyto_nucl 16, cyto 9.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201483)
HIX0201483
HIT000059342
(
AB042719
)
(Protein MCM10 homolog; HsMCM10;)
genome : 13,206,127 - 13,252,311 (46,185)
query : 20 - 3,721 (3,702/3,721)
19 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)3'
coverage = 0.995
InterPro :
IPR015408 : Zinc finger, Mcm10/DnaG-type
IPR015411 : Replication factor Mcm10
GO :
0005634 : Cellular Component : nucleus
0006260 : Biological Process : DNA replication
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 21.5, cyto_nucl 16, cyto 9.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201483)
HIX0201483
HIT000025436
(
AL136840
)
(Protein MCM10 homolog isoform 2.)
genome : 13,206,127 - 13,253,103 (46,977)
query : 19 - 4,606 (4,588/4,619)
18 exons
identity = 0.999
5'(1.000;1.000;1.000;0.993;1.000;1.000;1.000;
1.000;0.995;1.000;0.991;1.000;1.000;1.000;
1.000;1.000;1.000;0.999)3'
coverage = 0.996
InterPro :
IPR015408 : Zinc finger, Mcm10/DnaG-type
IPR015411 : Replication factor Mcm10
GO :
0005634 : Cellular Component : nucleus
0006260 : Biological Process : DNA replication
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 21.5, cyto_nucl 16, cyto 9.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201483)
HIX0201483
HIT000501943
(
BC143490
)
(Protein MCM10 homolog; HsMCM10;)
genome : 13,206,127 - 13,251,348 (45,222)
query : 18 - 2,756 (2,739/2,756)
19 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)3'
coverage = 0.994
InterPro :
IPR015408 : Zinc finger, Mcm10/DnaG-type
IPR015411 : Replication factor Mcm10
GO :
0005634 : Cellular Component : nucleus
0006260 : Biological Process : DNA replication
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 21.5, cyto_nucl 16, cyto 9.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201483)
HIX0201483
HIT000359974 (
ENST00000378694
)
(Protein MCM10 homolog; HsMCM10;)
genome : 13,206,128 - 13,253,104 (46,977)
query : 1 - 4,587 (4,587/4,587)
18 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 21.5, cyto_nucl 16, cyto 9.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201483)
HIX0201483
HIT000034171
(
BC009108
)
(Protein MCM10 homolog isoform 2.)
genome : 13,217,572 - 13,252,314 (34,743)
query : 1 - 2,976 (2,976/2,989)
15 exons
identity = 0.998
5'(1.000;0.994;1.000;1.000;0.990;1.000;0.991;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.997)3'
coverage = 1.000
InterPro :
IPR015408 : Zinc finger, Mcm10/DnaG-type
IPR015411 : Replication factor Mcm10
GO :
0005634 : Cellular Component : nucleus
0006260 : Biological Process : DNA replication
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 27.5, cyto_nucl 16.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201483)
HIX0201483
HIT000032051
(
BC004876
)
(Protein MCM10 homolog isoform 2.)
genome : 13,224,957 - 13,251,899 (26,943)
query : 1 - 2,260 (2,260/2,303)
13 exons
identity = 1.000
5'(1.000;1.000;0.995;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR015408 : Zinc finger, Mcm10/DnaG-type
IPR015411 : Replication factor Mcm10
GO :
0005634 : Cellular Component : nucleus
0006260 : Biological Process : DNA replication
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19.5, cyto_nucl 14.5, cyto 8.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201483)
HIX0201483
HIT000070256
(
AF119869
)
(Protein MCM10 homolog isoform 2.)
genome : 13,234,282 - 13,251,840 (17,559)
query : 11 - 1,622 (1,612/1,658)
9 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 0.994
InterPro :
IPR015411 : Replication factor Mcm10
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23, cyto 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201483)
HIX0201483
HIT000564710 (
ENST00000459751
)
(Protein MCM10 homolog isoform 2.)
genome : 13,234,491 - 13,237,580 (3,090)
query : 1 - 618 (618/618)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 28, mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201483)
HIX0201483
HIT000585269 (
ENST00000481292
)
(Protein MCM10 homolog isoform 2.)
genome : 13,237,086 - 13,243,872 (6,787)
query : 1 - 900 (900/900)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 14.5, cyto_nucl 14.5, cyto 13.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201483)
HIX0201483
HIT000589455 (
ENST00000485659
)
(Protein MCM10 homolog isoform 2.)
genome : 13,240,763 - 13,246,526 (5,764)
query : 1 - 467 (467/467)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 27, cyto 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201483)
HIX0008653
HIT000038251
(
BC018068
)
Representative transcript
(Unique cartilage matrix-associated protein; Contains: Unique cartilage matrix-associated protein C-terminal fragment; Ucma-C; Gla-rich protein; GRP; Precursor;)
genome : 13,263,768 - 13,276,331 (12,564)
query : 1 - 825 (825/840)
5 exons
identity = 0.994
3'(0.993;1.000;0.990;1.000;0.992)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008653)
Ortholog candidate ( ->
Evola
)
Canis
sp. (Dog) : ENSCAFT00000035650
Macaca
sp. (Macaque) : ENSMMUT00000007884
Monodelphis
sp. (Opossum) : ENSMODT00000021405
Oryzias
sp. (Medaka) : ENSORLT00000004938
Pongo
sp. (Orangutan) : ENSPPYT00000002508
Mus
sp. (Mouse) : EU368184
Rattus
sp. (Rat) : XM_001066258
Pan
sp. (Chimpanzee) : XM_001140953
Danio
sp. (Zebrafish) : XM_001331665
Equus
sp. (Horse) : XM_001499018
Bos
sp. (Cow) : XM_867865
HIX0008653
HIT000213216 (
NM_145314
)
(Unique cartilage matrix-associated protein; Contains: Unique cartilage matrix-associated protein C-terminal fragment; Ucma-C; Gla-rich protein; GRP; Precursor;)
genome : 13,263,768 - 13,276,331 (12,564)
query : 1 - 825 (825/840)
5 exons
identity = 0.994
3'(0.993;1.000;0.990;1.000;0.992)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 32
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008653)
HIX0008653
HIT000568200 (
ENST00000463405
)
(Unique cartilage matrix-associated protein; Contains: Unique cartilage matrix-associated protein C-terminal fragment; Ucma-C; Gla-rich protein; GRP; Precursor;)
genome : 13,263,767 - 13,276,334 (12,568)
query : 1 - 763 (763/763)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 29
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008653)
HIX0008653
HIT000359961 (
ENST00000378681
)
(Unique cartilage matrix-associated protein; Contains: Unique cartilage matrix-associated protein C-terminal fragment; Ucma-C; Gla-rich protein; GRP; Precursor;)
genome : 13,263,767 - 13,276,331 (12,565)
query : 1 - 826 (826/826)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008653)
HIX0219010
HIT000568814 (
ENST00000464049
)
(Conserved hypothetical protein.)
genome : 13,333,461 - 13,336,987 (3,527)
query : 1 - 1,012 (1,012/1,012)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 27, cyto_nucl 3.5, cyto 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0219010)
HIX0218867
HIT000568512 (
ENST00000463730
)
(Conserved hypothetical protein.)
genome : 13,337,228 - 13,342,097 (4,870)
query : 1 - 568 (568/568)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 13.5, cyto_nucl 12.3333, cyto_pero 8.5, extr 6,
mito 6, nucl 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0218867)
HIX0218867
HIT000090334
(
BC021011
)
Representative transcript
(Non-protein coding transcript.)
genome : 13,342,001 - 13,342,130 (130)
query : 5 - 134 (130/134)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 0.970
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0218867)
HIX0170846
HIT000527864 (
ENST00000429930
)
(Conserved hypothetical protein.)
genome : 13,350,145 - 13,350,447 (303)
query : 1 - 303 (303/303)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16, cyto 8, mito 8, cyto_mito 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0170846)
HIX0008655
HIT000204028 (
NM_012247
)
(Selenide, water dikinase 1; EC=2.7.9.3; Selenium donor protein 1; Selenophosphate synthase 1;)
genome : 13,359,438 - 13,390,298 (30,861)
query : 1 - 3,260 (3,260/3,275)
9 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.7.9.3
KEGG pathway :
00450 : Selenocompound metabolism (17)
01100 : Metabolic pathways (1346)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 26.5, cyto_nucl 16, nucl 4.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008655)
HIX0008655
HIT000656089 (
NM_001195602
)
(Selenide, water dikinase 1 isoform 2.)
genome : 13,359,438 - 13,390,298 (30,861)
query : 1 - 2,989 (2,989/3,004)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
EC number :
EC 2.7.9.3
KEGG pathway :
00450 : Selenocompound metabolism (17)
01100 : Metabolic pathways (1346)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cysk 17, cyto 10, cyto_nucl 8, nucl 4
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008655)
HIX0008655
HIT000656090 (
NM_001195604
)
(Selenide, water dikinase 1; EC=2.7.9.3; Selenium donor protein 1; Selenophosphate synthase 1;)
genome : 13,359,438 - 13,390,298 (30,861)
query : 1 - 3,047 (3,047/3,062)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
EC number :
EC 2.7.9.3
KEGG pathway :
00450 : Selenocompound metabolism (17)
01100 : Metabolic pathways (1346)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 24.5, cyto_nucl 17, nucl 6.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008655)
HIX0008655
HIT000261529
(
BC064610
)
(Hypothetical short protein.)
genome : 13,359,438 - 13,360,188 (751)
query : 1 - 751 (751/766)
1 exon
identity = 0.999
3'(0.999)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 20, nucl 9
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008655)
HIX0008655
HIT000124936 (
ENST00000327347
)
(Selenide, water dikinase 1; EC=2.7.9.3; Selenium donor protein 1; Selenophosphate synthase 1;)
genome : 13,359,424 - 13,390,297 (30,874)
query : 1 - 3,273 (3,273/3,273)
9 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.7.9.3
KEGG pathway :
00450 : Selenocompound metabolism (17)
01100 : Metabolic pathways (1346)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 26.5, cyto_nucl 16, nucl 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008655)
HIX0008655
HIT000122150 (
ENST00000319684
)
(Selenide, water dikinase 1; EC=2.7.9.3; Selenium donor protein 1; Selenophosphate synthase 1;)
genome : 13,359,424 - 13,387,028 (27,605)
query : 1 - 2,762 (2,762/2,762)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.7.9.3
KEGG pathway :
00450 : Selenocompound metabolism (17)
01100 : Metabolic pathways (1346)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 24.5, cyto_nucl 17, nucl 6.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008655)
HIX0008655
HIT000649091
(
GU954545
)
(Selenide, water dikinase 1; EC=2.7.9.3; Selenium donor protein 1; Selenophosphate synthase 1;)
genome : 13,360,082 - 13,390,280 (30,199)
query : 1 - 2,598 (2,598/2,612)
9 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;0.994;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.7.9.3
KEGG pathway :
00450 : Selenocompound metabolism (17)
01100 : Metabolic pathways (1346)
InterPro :
IPR000728 : AIR synthase related protein, N-terminal domain
IPR004536 : Selenophosphate synthetase
IPR010918 : AIR synthase-related protein, C-terminal domain
IPR016188 : PurM, N-terminal-like
GO :
0003824 : Molecular Function : catalytic activity
0004756 : Molecular Function : selenide, water dikinase activity
0005524 : Molecular Function : ATP binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 26.5, cyto_nucl 16, nucl 4.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008655)
Ortholog candidate ( ->
Evola
)
Rattus
sp. (Rat) : AY724491
Danio
sp. (Zebrafish) : BC045302
Mus
sp. (Mouse) : BC066037
Bos
sp. (Cow) : BC120303
Gallus
sp. (Chicken) : CR385500
Pongo
sp. (Orangutan) : CR857274
Canis
sp. (Dog) : ENSCAFT00000036608
Oryzias
sp. (Medaka) : ENSORLT00000012854
Tetraodon
sp. (Tetraodon) : GSTENT00033311001
Macaca
sp. (Macaque) : XM_001086299
Pan
sp. (Chimpanzee) : XM_001142012
Monodelphis
sp. (Opossum) : XM_001363689
Equus
sp. (Horse) : XM_001498783
HIX0008655
HIT000649092
(
GU954546
)
(Selenide, water dikinase 1 isoform 2.)
genome : 13,360,082 - 13,390,280 (30,199)
query : 1 - 2,327 (2,327/2,341)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;0.994;1.000;1.000;
1.000)5'
coverage = 1.000
EC number :
EC 2.7.9.3
KEGG pathway :
00450 : Selenocompound metabolism (17)
01100 : Metabolic pathways (1346)
InterPro :
IPR000728 : AIR synthase related protein, N-terminal domain
IPR004536 : Selenophosphate synthetase
IPR010918 : AIR synthase-related protein, C-terminal domain
IPR016188 : PurM, N-terminal-like
GO :
0003824 : Molecular Function : catalytic activity
0004756 : Molecular Function : selenide, water dikinase activity
0005524 : Molecular Function : ATP binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cysk 17, cyto 10, cyto_nucl 8, nucl 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008655)
HIX0008655
HIT000649093
(
GU954547
)
(Selenide, water dikinase 1; EC=2.7.9.3; Selenium donor protein 1; Selenophosphate synthase 1;)
genome : 13,360,082 - 13,390,280 (30,199)
query : 1 - 2,385 (2,385/2,399)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;0.994;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
EC number :
EC 2.7.9.3
KEGG pathway :
00450 : Selenocompound metabolism (17)
01100 : Metabolic pathways (1346)
InterPro :
IPR000728 : AIR synthase related protein, N-terminal domain
IPR004536 : Selenophosphate synthetase
IPR010918 : AIR synthase-related protein, C-terminal domain
IPR016188 : PurM, N-terminal-like
GO :
0003824 : Molecular Function : catalytic activity
0004756 : Molecular Function : selenide, water dikinase activity
0005524 : Molecular Function : ATP binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 24.5, cyto_nucl 17, nucl 6.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008655)
HIX0008655
HIT000649094
(
GU954548
)
(Selenide, water dikinase 1; EC=2.7.9.3; Selenium donor protein 1; Selenophosphate synthase 1;)
genome : 13,360,082 - 13,390,280 (30,199)
query : 1 - 2,661 (2,661/2,675)
10 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;0.994;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.7.9.3
KEGG pathway :
00450 : Selenocompound metabolism (17)
01100 : Metabolic pathways (1346)
InterPro :
IPR000728 : AIR synthase related protein, N-terminal domain
IPR004536 : Selenophosphate synthetase
IPR010918 : AIR synthase-related protein, C-terminal domain
IPR016188 : PurM, N-terminal-like
GO :
0003824 : Molecular Function : catalytic activity
0004756 : Molecular Function : selenide, water dikinase activity
0005524 : Molecular Function : ATP binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 24, cyto_nucl 17.5, nucl 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008655)
HIX0008655
HIT000649095
(
GU954549
)
(Selenide, water dikinase 1; EC=2.7.9.3; Selenium donor protein 1; Selenophosphate synthase 1;)
genome : 13,360,082 - 13,390,280 (30,199)
query : 1 - 2,690 (2,690/2,704)
10 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;0.994;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.7.9.3
KEGG pathway :
00450 : Selenocompound metabolism (17)
01100 : Metabolic pathways (1346)
InterPro :
IPR000728 : AIR synthase related protein, N-terminal domain
IPR004536 : Selenophosphate synthetase
IPR010918 : AIR synthase-related protein, C-terminal domain
IPR016188 : PurM, N-terminal-like
GO :
0003824 : Molecular Function : catalytic activity
0004756 : Molecular Function : selenide, water dikinase activity
0005524 : Molecular Function : ATP binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 24, cyto_nucl 17.5, nucl 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008655)
HIX0008655
HIT000261194
(
BC063816
)
Representative transcript
(Selenide, water dikinase 1; EC=2.7.9.3; Selenium donor protein 1; Selenophosphate synthase 1;)
genome : 13,360,082 - 13,390,223 (30,142)
query : 1 - 2,542 (2,542/2,556)
9 exons
identity = 0.999
3'(0.999;1.000;1.000;1.000;0.994;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.7.9.3
KEGG pathway :
00450 : Selenocompound metabolism (17)
01100 : Metabolic pathways (1346)
InterPro :
IPR000728 : AIR synthase related protein, N-terminal domain
IPR004536 : Selenophosphate synthetase
IPR010918 : AIR synthase-related protein, C-terminal domain
IPR016188 : PurM, N-terminal-like
GO :
0003824 : Molecular Function : catalytic activity
0004756 : Molecular Function : selenide, water dikinase activity
0005524 : Molecular Function : ATP binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 26.5, cyto_nucl 16, nucl 4.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008655)
HIX0008655
HIT000359894 (
ENST00000378614
)
(Selenide, water dikinase 1; EC=2.7.9.3; Selenium donor protein 1; Selenophosphate synthase 1;)
genome : 13,360,083 - 13,390,280 (30,198)
query : 1 - 2,384 (2,384/2,384)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
EC number :
EC 2.7.9.3
KEGG pathway :
00450 : Selenocompound metabolism (17)
01100 : Metabolic pathways (1346)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 24.5, cyto_nucl 17, nucl 6.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008655)
HIX0008655
HIT000644720 (
ENST00000545675
)
(Selenide, water dikinase 1 isoform 3.)
genome : 13,360,083 - 13,390,280 (30,198)
query : 1 - 2,689 (2,689/2,689)
10 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.7.9.3
KEGG pathway :
00450 : Selenocompound metabolism (17)
01100 : Metabolic pathways (1346)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 24, cyto_nucl 17.5, nucl 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008655)
HIX0008655
HIT000044939
(
AK125066
)
(Selenide, water dikinase; EC=2.7.9.3; Protein patufet; Selenium donor protein; Selenophosphate synthase; dSelD;)
genome : 13,360,083 - 13,379,583 (19,501)
query : 1 - 3,182 (3,182/3,182)
6 exons
identity = 0.996
3'(0.998;1.000;1.000;1.000;0.994;0.992)5'
coverage = 1.000
EC number :
EC 2.7.9.3
KEGG pathway :
00450 : Selenocompound metabolism (17)
01100 : Metabolic pathways (1346)
InterPro :
IPR000728 : AIR synthase related protein, N-terminal domain
IPR004536 : Selenophosphate synthetase
IPR010918 : AIR synthase-related protein, C-terminal domain
IPR016188 : PurM, N-terminal-like
GO :
0003824 : Molecular Function : catalytic activity
0004756 : Molecular Function : selenide, water dikinase activity
0005524 : Molecular Function : ATP binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 11.5, mito 10, cyto_nucl 8, mito_pero 8
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008655)
HIX0008655
HIT000496192
(
AK301568
)
(Selenide, water dikinase 1 isoform 2.)
genome : 13,360,590 - 13,390,034 (29,445)
query : 2 - 1,574 (1,573/1,574)
8 exons
identity = 0.999
3'(0.999;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 0.999
EC number :
EC 2.7.9.3
KEGG pathway :
00450 : Selenocompound metabolism (17)
01100 : Metabolic pathways (1346)
InterPro :
IPR000728 : AIR synthase related protein, N-terminal domain
IPR004536 : Selenophosphate synthetase
IPR010918 : AIR synthase-related protein, C-terminal domain
IPR016188 : PurM, N-terminal-like
GO :
0003824 : Molecular Function : catalytic activity
0004756 : Molecular Function : selenide, water dikinase activity
0005524 : Molecular Function : ATP binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cysk 17, cyto 10, cyto_nucl 8, nucl 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008655)
HIX0008655
HIT000636175_01 (
ENST00000537130
)
(Selenide, water dikinase 1 isoform 2.)
genome : 13,360,590 - 13,390,030 (29,441)
query : 1 - 1,569 (1,569/1,569)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
EC number :
EC 2.7.9.3
KEGG pathway :
00450 : Selenocompound metabolism (17)
01100 : Metabolic pathways (1346)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cysk 17, cyto 10, cyto_nucl 8, nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008655)
HIX0008655
HIT000219367
(
U34044
)
(Selenide, water dikinase 1 isoform 3.)
genome : 13,360,915 - 13,390,207 (29,293)
query : 2 - 1,672 (1,671/1,672)
9 exons
identity = 0.981
3'(0.991;0.995;1.000;1.000;0.994;1.000;1.000;
1.000;0.876)5'
coverage = 0.999
EC number :
EC 2.7.9.3
KEGG pathway :
00450 : Selenocompound metabolism (17)
01100 : Metabolic pathways (1346)
InterPro :
IPR000728 : AIR synthase related protein, N-terminal domain
IPR004536 : Selenophosphate synthetase
IPR010918 : AIR synthase-related protein, C-terminal domain
IPR016188 : PurM, N-terminal-like
GO :
0003824 : Molecular Function : catalytic activity
0004756 : Molecular Function : selenide, water dikinase activity
0005524 : Molecular Function : ATP binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 25.5, cyto_nucl 16, nucl 5.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008655)
HIX0008655
HIT000491753
(
AK297129
)
(Selenide, water dikinase 1; EC=2.7.9.3; Selenium donor protein 1; Selenophosphate synthase 1;)
genome : 13,360,920 - 13,380,881 (19,962)
query : 1 - 1,283 (1,283/1,283)
7 exons
identity = 0.997
3'(0.995;0.995;1.000;1.000;0.994;1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.7.9.3
KEGG pathway :
00450 : Selenocompound metabolism (17)
01100 : Metabolic pathways (1346)
InterPro :
IPR000728 : AIR synthase related protein, N-terminal domain
IPR004536 : Selenophosphate synthetase
IPR010918 : AIR synthase-related protein, C-terminal domain
IPR016188 : PurM, N-terminal-like
GO :
0003824 : Molecular Function : catalytic activity
0004756 : Molecular Function : selenide, water dikinase activity
0005524 : Molecular Function : ATP binding
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 20, cyto_nucl 14.6667, cyto_pero 12.3333, nucl 5,
extr 2, mito 2, pero 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008655)
HIX0008655
HIT000030019
(
BC000941
)
(Selenide, water dikinase 1; EC=2.7.9.3; Selenium donor protein 1; Selenophosphate synthase 1;)
genome : 13,360,974 - 13,387,018 (26,045)
query : 1 - 1,415 (1,415/1,429)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 0.999
EC number :
EC 2.7.9.3
KEGG pathway :
00450 : Selenocompound metabolism (17)
01100 : Metabolic pathways (1346)
InterPro :
IPR000728 : AIR synthase related protein, N-terminal domain
IPR004536 : Selenophosphate synthetase
IPR010918 : AIR synthase-related protein, C-terminal domain
IPR016188 : PurM, N-terminal-like
GO :
0003824 : Molecular Function : catalytic activity
0004756 : Molecular Function : selenide, water dikinase activity
0005524 : Molecular Function : ATP binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 26.5, cyto_nucl 16, nucl 4.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008655)
HIX0008655
HIT000611319_03 (
ENST00000511612
)
(Selenide, water dikinase 1; EC=2.7.9.3; Selenium donor protein 1; Selenophosphate synthase 1;)
genome : 13,361,141 - 13,361,315 (175)
query : 1 - 175 (175/175)
1 exon
identity = 0.966
3'(0.966)5'
coverage = 1.000
EC number :
EC 2.7.9.3
KEGG pathway :
00450 : Selenocompound metabolism (17)
01100 : Metabolic pathways (1346)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18.5, cyto_nucl 10.5, extr 10
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008655)
HIX0008655
HIT000428695
(
AK309829
)
(Selenide, water dikinase 1; EC=2.7.9.3; Selenium donor protein 1; Selenophosphate synthase 1;)
genome : 13,370,879 - 13,390,034 (19,156)
query : 1 - 1,583 (1,583/1,583)
6 exons
identity = 0.999
3'(0.999;0.994;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.7.9.3
KEGG pathway :
00450 : Selenocompound metabolism (17)
01100 : Metabolic pathways (1346)
InterPro :
IPR000728 : AIR synthase related protein, N-terminal domain
IPR004536 : Selenophosphate synthetase
IPR016188 : PurM, N-terminal-like
GO :
0003824 : Molecular Function : catalytic activity
0004756 : Molecular Function : selenide, water dikinase activity
0005524 : Molecular Function : ATP binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21, cyto_nucl 17, nucl 9
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008655)
HIX0008655
HIT000511345 (
ENST00000413411
)
(Selenide, water dikinase 1; EC=2.7.9.3; Selenium donor protein 1; Selenophosphate synthase 1;)
genome : 13,375,877 - 13,389,358 (13,482)
query : 1 - 660 (660/660)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.7.9.3
KEGG pathway :
00450 : Selenocompound metabolism (17)
01100 : Metabolic pathways (1346)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18, cyto_nucl 15, nucl 8, extr 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008655)
HIX0008655
HIT000523881 (
ENST00000425947
)
(Selenide, water dikinase 1; EC=2.7.9.3; Selenium donor protein 1; Selenophosphate synthase 1;)
genome : 13,375,901 - 13,382,790 (6,890)
query : 1 - 383 (383/383)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.7.9.3
KEGG pathway :
00450 : Selenocompound metabolism (17)
01100 : Metabolic pathways (1346)
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, cyto 9.5, cyto_nucl 9.5, nucl 6.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008655)
HIX0008655
HIT000597729 (
ENST00000494329
)
(Selenide, water dikinase 1; EC=2.7.9.3; Selenium donor protein 1; Selenophosphate synthase 1;)
genome : 13,380,716 - 13,387,460 (6,745)
query : 1 - 796 (796/796)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.7.9.3
KEGG pathway :
00450 : Selenocompound metabolism (17)
01100 : Metabolic pathways (1346)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19, cyto_nucl 15.5, nucl 8, extr 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008655)
HIX0035611
HIT000097036
(
BC041999
)
Representative transcript
(Conserved hypothetical protein.)
genome : 13,426,805 - 13,427,684 (880)
query : 1 - 880 (880/895)
1 exon
identity = 0.998
3'(0.998)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 23, lyso 5, cyto 2, mito 2, cyto_mito 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0035611)
HIX0171109
HIT000546206 (
ENST00000448272
)
(Hypothetical short protein.)
genome : 13,457,202 - 13,465,133 (7,932)
query : 1 - 454 (454/454)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
This sequence is too short.
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0171109)
HIX0008656
HIT000214001 (
NM_152751
)
(BEN domain-containing protein 7 isoform 1.)
genome : 13,480,484 - 13,544,976 (64,493)
query : 1 - 2,392 (2,392/2,408)
9 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 26.5, cyto_nucl 17.5, cyto 5.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008656)
HIX0008656
HIT000091864
(
BC029597
)
(BEN domain-containing protein 7 isoform 1.)
genome : 13,480,484 - 13,502,083 (21,600)
query : 2 - 1,765 (1,764/1,781)
4 exons
identity = 0.998
3'(0.998;1.000;1.000;0.998)5'
coverage = 0.999
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 11.5, cyto_nucl 10.1667, extr 7, cyto 5.5,
cyto_pero 5.5, mito 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008656)
HIX0008656
HIT000590291 (
ENST00000486542
)
(BEN domain-containing protein 7 isoform 1.)
genome : 13,480,484 - 13,502,083 (21,600)
query : 1 - 1,764 (1,764/1,764)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 11.5, cyto_nucl 10.1667, extr 7, cyto 5.5,
cyto_pero 5.5, mito 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008656)
HIX0008656
HIT000480210 (
ENST00000396900
)
(BEN domain-containing protein 7;)
genome : 13,480,501 - 13,570,533 (90,033)
query : 1 - 2,231 (2,231/2,231)
9 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 21.5, cyto_nucl 18, cyto 9.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008656)
HIX0008656
HIT000022456
(
AK097602
)
Representative transcript
(BEN domain-containing protein 7;)
genome : 13,480,637 - 13,544,976 (64,340)
query : 1 - 2,239 (2,239/2,239)
9 exons
identity = 0.998
3'(0.997;1.000;0.983;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
InterPro :
IPR018379 : BEN domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 26.5, cyto_nucl 17.5, cyto 5.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008656)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK030428
Bos
sp. (Cow) : ENSBTAT00000027718
Equus
sp. (Horse) : ENSECAT00000009301
Oryzias
sp. (Medaka) : ENSORLT00000012871
Pongo
sp. (Orangutan) : ENSPPYT00000002512
Rattus
sp. (Rat) : ENSRNOT00000057972
Tetraodon
sp. (Tetraodon) : GSTENT00033310001
Takifugu
sp. (Fugu) : SINFRUT00000176585
Monodelphis
sp. (Opossum) : XM_001368578
Pan
sp. (Chimpanzee) : XM_507664
Canis
sp. (Dog) : XM_544255
Danio
sp. (Zebrafish) : XM_684107
Macaca
sp. (Macaque) : XR_010612
HIX0008656
HIT000133713 (
ENST00000341083
)
(BEN domain-containing protein 7 isoform 1.)
genome : 13,480,637 - 13,544,976 (64,340)
query : 1 - 2,239 (2,239/2,239)
9 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 26.5, cyto_nucl 17.5, cyto 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008656)
HIX0008656
HIT000485564 (
NM_001100912
)
(BEN domain-containing protein 7 isoform 2.)
genome : 13,483,089 - 13,544,976 (61,888)
query : 1 - 1,906 (1,906/1,924)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31.5, cyto_nucl 16.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008656)
HIX0008656
HIT000027107
(
AL832195
)
(BEN domain-containing protein 7 isoform 2.)
genome : 13,483,089 - 13,523,073 (39,985)
query : 1 - 6,524 (6,524/6,542)
3 exons
identity = 0.997
3'(0.997;0.992;1.000)5'
coverage = 1.000
InterPro :
IPR018379 : BEN domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 13.5, mito 12, cyto_nucl 7.5, extr 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008656)
HIX0008656
HIT000538216 (
ENST00000440282
)
(BEN domain-containing protein 7 isoform 2.)
genome : 13,483,088 - 13,523,073 (39,986)
query : 1 - 6,524 (6,524/6,524)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 13.5, mito 12, cyto_nucl 7.5, extr 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008656)
HIX0008656
HIT000480208 (
ENST00000396898
)
(BEN domain-containing protein 7 isoform 2.)
genome : 13,483,090 - 13,570,533 (87,444)
query : 1 - 1,934 (1,934/1,934)
9 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 22, cyto_nucl 18, cyto 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008656)
HIX0008656
HIT000041338
(
BC031618
)
(BEN domain-containing protein 7 isoform 2.)
genome : 13,483,355 - 13,544,945 (61,591)
query : 1 - 1,609 (1,609/1,646)
8 exons
identity = 0.999
3'(0.997;1.000;0.992;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
InterPro :
IPR018379 : BEN domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31.5, cyto_nucl 16.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008656)
HIX0008656
HIT000359885 (
ENST00000378605
)
(BEN domain-containing protein 7 isoform 2.)
genome : 13,483,355 - 13,544,945 (61,591)
query : 1 - 1,609 (1,609/1,609)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31.5, cyto_nucl 16.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008656)
HIX0008656
HIT000584703 (
ENST00000480703
)
(BEN domain-containing protein 7 isoform 2.)
genome : 13,484,980 - 13,494,614 (9,635)
query : 1 - 554 (554/554)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 11.6667, cyto 10.5, extr 8,
cyto_plas 7.33333, nucl 5.5, mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008656)
HIX0008656
HIT000568103 (
ENST00000463303
)
(BEN domain-containing protein 7 isoform 2.)
genome : 13,487,290 - 13,494,637 (7,348)
query : 1 - 421 (421/421)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 14.1667, nucl 13.5, cyto 13.5,
cyto_plas 8.33333
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008656)
HIX0008656
HIT000574073 (
ENST00000469555
)
(BEN domain-containing protein 7 isoform 2.)
genome : 13,487,316 - 13,522,976 (35,661)
query : 1 - 551 (551/551)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 13.5, cyto_nucl 10, mito 9, extr 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008656)
HIX0026111
HIT000057767
(
BX649120
)
Representative transcript
(Conserved hypothetical protein.)
genome : 13,530,506 - 13,533,695 (3,190)
query : 1 - 3,188 (3,188/3,209)
1 exon
identity = 0.996
3'(0.996)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 23, nucl 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026111)
HIX0008656
HIT000596148 (
ENST00000492675
)
(BEN domain-containing protein 7 isoform 2.)
genome : 13,534,692 - 13,538,929 (4,238)
query : 1 - 349 (349/349)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 23, nucl 2, mito 2, golg 2, cyto_pero 2,
mito_nucl 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008656)
HIX0008656
HIT000570930 (
ENST00000466271
)
(BEN domain-containing protein 7 isoform 2.)
genome : 13,538,788 - 13,570,974 (32,187)
query : 1 - 990 (990/990)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 11, extr 10, mito 7, nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008656)
HIX0035590
HIT000095323
(
BC038728
)
Representative transcript
(Hypothetical short protein.)
genome : 13,568,765 - 13,570,185 (1,421)
query : 1 - 1,422 (1,422/1,437)
1 exon
identity = 0.995
3'(0.995)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 12, nucl 12, cyto_nucl 9.5, cyto 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0035590)
HIX0170968
HIT000536365 (
ENST00000438431
)
(Hypothetical short protein.)
genome : 13,570,516 - 13,572,262 (1,747)
query : 1 - 380 (380/380)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0170968)
HIX0008642
HIT000077310
(
AF318574
)
(Regulator of nonsense transcripts 2; Nonsense mRNA reducing factor 2; Up-frameshift suppressor 2 homolog; hUpf2;)
genome : 11,962,022 - 12,084,810 (122,789)
query : 1 - 5,167 (5,167/5,195)
22 exons
identity = 0.974
3'(0.995;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.994;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR003890 : MIF4G-like, type 3
IPR007193 : Up-frameshift suppressor 2
IPR016021 : MIF4-like, type 1/2/3
GO :
0003723 : Molecular Function : RNA binding
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 16.8333, nucl 16, cyto 15.5,
cyto_mito 8.66667
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008642)
HIX0008642
HIT000211822 (
NM_080599
)
(Regulator of nonsense transcripts 2; Nonsense mRNA reducing factor 2; Up-frameshift suppressor 2 homolog; hUpf2;)
genome : 11,962,021 - 12,085,169 (123,149)
query : 1 - 5,370 (5,370/5,387)
22 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 16.8333, nucl 16, cyto 15.5,
cyto_mito 8.66667
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008642)
HIX0008642
HIT000205532 (
NM_015542
)
(Regulator of nonsense transcripts 2; Nonsense mRNA reducing factor 2; Up-frameshift suppressor 2 homolog; hUpf2;)
genome : 11,962,021 - 12,084,840 (122,820)
query : 1 - 5,200 (5,200/5,217)
22 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 16.8333, nucl 16, cyto 15.5,
cyto_mito 8.66667
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008642)
HIX0008642
HIT000076654
(
AF301013
)
Representative transcript
(Regulator of nonsense transcripts 2; Nonsense mRNA reducing factor 2; Up-frameshift suppressor 2 homolog; hUpf2;)
genome : 11,962,021 - 12,084,833 (122,813)
query : 1 - 5,192 (5,192/5,209)
22 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR003890 : MIF4G-like, type 3
IPR007193 : Up-frameshift suppressor 2
IPR016021 : MIF4-like, type 1/2/3
GO :
0003723 : Molecular Function : RNA binding
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 16.8333, nucl 16, cyto 15.5,
cyto_mito 8.66667
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008642)
Ortholog candidate ( ->
Evola
)
Macaca
sp. (Macaque) : AB171567
Bos
sp. (Cow) : BC126821
Gallus
sp. (Chicken) : CR354178
Monodelphis
sp. (Opossum) : ENSMODT00000021332
Oryzias
sp. (Medaka) : ENSORLT00000021508
Pongo
sp. (Orangutan) : ENSPPYT00000002497
Takifugu
sp. (Fugu) : SINFRUT00000168581
Equus
sp. (Horse) : XM_001916601
Pan
sp. (Chimpanzee) : XM_507656
Danio
sp. (Zebrafish) : XM_692368
Canis
sp. (Dog) : XM_852809
HIX0008642
HIT000024319
(
AL080198
)
(Regulator of nonsense transcripts 2; Nonsense mRNA reducing factor 2; Up-frameshift suppressor 2 homolog; hUpf2;)
genome : 11,962,021 - 12,041,937 (79,917)
query : 1 - 3,369 (3,369/3,382)
16 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR003890 : MIF4G-like, type 3
IPR007193 : Up-frameshift suppressor 2
IPR016021 : MIF4-like, type 1/2/3
GO :
0003723 : Molecular Function : RNA binding
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 13.5, cyto_nucl 12, nucl 9.5, cysk 4, mito 2,
pero 2, mito_pero 2, cysk_plas 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008642)
HIX0008642
HIT000311432 (
ENST00000357604
)
(Regulator of nonsense transcripts 2; Nonsense mRNA reducing factor 2; Up-frameshift suppressor 2 homolog; hUpf2;)
genome : 11,962,021 - 12,084,833 (122,813)
query : 1 - 5,193 (5,193/5,193)
22 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 16.8333, nucl 16, cyto 15.5,
cyto_mito 8.66667
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008642)
HIX0008642
HIT000310361 (
ENST00000356352
)
(Regulator of nonsense transcripts 2; Nonsense mRNA reducing factor 2; Up-frameshift suppressor 2 homolog; hUpf2;)
genome : 11,962,021 - 12,077,896 (115,876)
query : 1 - 5,569 (5,569/5,569)
21 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 16.8333, nucl 16, cyto 15.5,
cyto_mito 8.66667
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008642)
HIX0008642
HIT000480356 (
ENST00000397053
)
(Regulator of nonsense transcripts 2; Nonsense mRNA reducing factor 2; Up-frameshift suppressor 2 homolog; hUpf2;)
genome : 11,962,022 - 12,085,023 (123,002)
query : 1 - 5,223 (5,223/5,223)
22 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 16.8333, nucl 16, cyto 15.5,
cyto_mito 8.66667
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008642)
HIX0008642
HIT000021046
(
AK096191
)
(Regulator of nonsense transcripts 2; Nonsense mRNA reducing factor 2; Up-frameshift suppressor 2 homolog; hUpf2;)
genome : 11,962,022 - 12,084,840 (122,819)
query : 1 - 2,845 (2,845/2,845)
9 exons
identity = 0.996
3'(1.000;1.000;1.000;1.000;0.997;0.939;1.000;
1.000)5'
coverage = 1.000
InterPro :
IPR003890 : MIF4G-like, type 3
GO :
0003723 : Molecular Function : RNA binding
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19, cyto_nucl 17, cyto 13
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008642)
HIX0008642
HIT000001123
(
AB037829
)
(Regulator of nonsense transcripts 2; Nonsense mRNA reducing factor 2; Up-frameshift suppressor 2 homolog; hUpf2;)
genome : 11,962,022 - 12,077,896 (115,875)
query : 1 - 5,568 (5,568/5,568)
21 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 16.8333, nucl 16, cyto 15.5,
cyto_mito 8.66667
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008642)
HIX0008642
HIT000387323
(
BC114964
)
(Regulator of nonsense transcripts 2; Nonsense mRNA reducing factor 2; Up-frameshift suppressor 2 homolog; hUpf2;)
genome : 11,962,245 - 12,084,804 (122,560)
query : 1 - 4,940 (4,940/4,940)
22 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR003890 : MIF4G-like, type 3
IPR007193 : Up-frameshift suppressor 2
IPR016021 : MIF4-like, type 1/2/3
GO :
0003723 : Molecular Function : RNA binding
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 16.8333, nucl 16, cyto 15.5,
cyto_mito 8.66667
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008642)
HIX0008642
HIT000387391
(
BC115737
)
(Regulator of nonsense transcripts 2; Nonsense mRNA reducing factor 2; Up-frameshift suppressor 2 homolog; hUpf2;)
genome : 11,962,245 - 12,084,804 (122,560)
query : 1 - 4,939 (4,939/4,939)
22 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR003890 : MIF4G-like, type 3
IPR007193 : Up-frameshift suppressor 2
IPR016021 : MIF4-like, type 1/2/3
GO :
0003723 : Molecular Function : RNA binding
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 16.8333, nucl 16, cyto 15.5,
cyto_mito 8.66667
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008642)
HIX0008642
HIT000083176
(
AY013249
)
(Regulator of nonsense transcripts 2; Nonsense mRNA reducing factor 2; Up-frameshift suppressor 2 homolog; hUpf2;)
genome : 11,963,265 - 12,077,446 (114,182)
query : 1 - 3,874 (3,874/3,874)
21 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR003890 : MIF4G-like, type 3
IPR007193 : Up-frameshift suppressor 2
IPR016021 : MIF4-like, type 1/2/3
GO :
0003723 : Molecular Function : RNA binding
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 16.8333, nucl 16, cyto 15.5,
cyto_mito 8.66667
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008642)
HIX0008646
HIT000202657 (
NM_006023
)
(Cell division cycle protein 123 homolog; Protein D123; HT-1080; PZ32;)
genome : 12,237,961 - 12,292,589 (54,629)
query : 1 - 1,548 (1,548/1,566)
13 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 0.999
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 11.5, mito 10.5, cyto_nucl 10.5, E.R._mito 7.5,
nucl 6.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008646)
HIX0008646
HIT000100563
(
D14878
)
(Cell division cycle protein 123 homolog; Protein D123; HT-1080; PZ32;)
genome : 12,237,965 - 12,292,587 (54,623)
query : 1 - 1,542 (1,542/1,542)
13 exons
identity = 0.997
5'(1.000;1.000;1.000;1.000;0.990;1.000;1.000;
1.000;1.000;1.000;1.000;0.986;0.996)3'
coverage = 1.000
InterPro :
IPR009772 : Cell division cycle protein 123
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 11.5, mito 10.5, cyto_nucl 10.5, E.R._mito 7.5,
nucl 6.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008646)
HIX0008646
HIT000112042 (
ENST00000281141
)
(Cell division cycle protein 123 homolog; Protein D123; HT-1080; PZ32;)
genome : 12,237,965 - 12,292,587 (54,623)
query : 1 - 1,542 (1,542/1,542)
13 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 11.5, mito 10.5, cyto_nucl 10.5, E.R._mito 7.5,
nucl 6.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008646)
HIX0008646
HIT000384764
(
AK225634
)
(Cell division cycle protein 123 homolog; Protein D123; HT-1080; PZ32;)
genome : 12,237,995 - 12,292,589 (54,595)
query : 1 - 1,514 (1,514/1,567)
13 exons
identity = 0.997
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;0.993;0.989)3'
coverage = 0.999
InterPro :
IPR009772 : Cell division cycle protein 123
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 11.5, mito 10.5, cyto_nucl 10.5, E.R._mito 7.5,
nucl 6.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008646)
HIX0008646
HIT000218850
(
U27112
)
Representative transcript
(Cell division cycle protein 123 homolog; Protein D123; HT-1080; PZ32;)
genome : 12,238,183 - 12,292,584 (54,402)
query : 1 - 1,321 (1,321/1,321)
13 exons
identity = 0.998
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;0.989)3'
coverage = 1.000
InterPro :
IPR009772 : Cell division cycle protein 123
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 11.5, mito 10.5, cyto_nucl 10.5, E.R._mito 7.5,
nucl 6.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008646)
Ortholog candidate ( ->
Evola
)
Macaca
sp. (Macaque) : AB220400
Mus
sp. (Mouse) : AK090122
Bos
sp. (Cow) : BC110235
Danio
sp. (Zebrafish) : BC152266
Tetraodon
sp. (Tetraodon) : CR636030
Pongo
sp. (Orangutan) : ENSPPYT00000002502
Rattus
sp. (Rat) : U34843
Pan
sp. (Chimpanzee) : XM_001136689
Monodelphis
sp. (Opossum) : XM_001363530
Equus
sp. (Horse) : XM_001499137
Canis
sp. (Dog) : XM_535189
HIX0008646
HIT000034461
(
BC009598
)
(Cell division cycle protein 123 homolog; Protein D123; HT-1080; PZ32;)
genome : 12,238,196 - 12,292,583 (54,388)
query : 1 - 1,307 (1,307/1,338)
13 exons
identity = 0.998
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;0.993)3'
coverage = 0.998
InterPro :
IPR009772 : Cell division cycle protein 123
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 11.5, mito 10.5, cyto_nucl 10.5, E.R._mito 7.5,
nucl 6.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008646)
HIX0008646
HIT000030507
(
BC001600
)
(Cell division cycle protein 123 homolog; Protein D123; HT-1080; PZ32;)
genome : 12,238,211 - 12,292,584 (54,374)
query : 1 - 1,293 (1,293/1,316)
13 exons
identity = 0.998
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;0.989)3'
coverage = 1.000
InterPro :
IPR009772 : Cell division cycle protein 123
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 11.5, mito 10.5, cyto_nucl 10.5, E.R._mito 7.5,
nucl 6.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008646)
HIX0008646
HIT000360180 (
ENST00000378900
)
(Cell division cycle protein 123 homolog.)
genome : 12,238,222 - 12,292,358 (54,137)
query : 1 - 933 (933/933)
12 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 10.5, extr 8, cyto_nucl 7.5, E.R._mito 7.5,
cyto 6.5, nucl 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008646)
HIX0008646
HIT000422159
(
AK289362
)
(Cell division cycle protein 123 homolog; Protein D123; HT-1080; PZ32;)
genome : 12,238,224 - 12,292,583 (54,360)
query : 1 - 1,279 (1,279/1,279)
13 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;0.996)3'
coverage = 1.000
InterPro :
IPR009772 : Cell division cycle protein 123
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 11.5, mito 10.5, cyto_nucl 10.5, E.R._mito 7.5,
nucl 6.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008646)
HIX0008646
HIT000267816
(
CR456966
)
(Cell division cycle protein 123 homolog; Protein D123; HT-1080; PZ32;)
genome : 12,238,245 - 12,292,332 (54,088)
query : 1 - 1,007 (1,007/1,011)
13 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 0.996
InterPro :
IPR009772 : Cell division cycle protein 123
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 11.5, mito 10.5, cyto_nucl 10.5, E.R._mito 7.5,
nucl 6.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008646)
HIX0008646
HIT000553707 (
ENST00000455773
)
(Cell division cycle protein 123 homolog.)
genome : 12,251,964 - 12,291,705 (39,742)
query : 19 - 717 (699/717)
9 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 0.975
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, cyto 9.5, cyto_nucl 6, mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008646)
HIX0008654
HIT000040793
(
BC029512
)
(Phytanoyl-CoA dioxygenase, peroxisomal; EC=1.14.11.18; Phytanic acid oxidase; Phytanoyl-CoA alpha-hydroxylase; PhyH; Precursor;)
genome : 13,319,799 - 13,342,090 (22,292)
query : 1 - 1,568 (1,568/1,583)
9 exons
identity = 0.999
3'(0.998;1.000;1.000;1.000;1.000;1.000;0.991;
1.000;1.000)5'
coverage = 1.000
EC number :
EC 1.14.11.18
InterPro :
IPR008775 : Phytanoyl-CoA dioxygenase
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 11, mito 10, nucl 5, E.R._mito 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008654)
HIX0008654
HIT000202822 (
NM_006214
)
(Phytanoyl-CoA dioxygenase, peroxisomal; EC=1.14.11.18; Phytanic acid oxidase; Phytanoyl-CoA alpha-hydroxylase; PhyH; Precursor;)
genome : 13,319,797 - 13,342,130 (22,334)
query : 1 - 1,609 (1,609/1,620)
9 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
EC number :
EC 1.14.11.18
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 11, mito 10, nucl 5, E.R._mito 5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008654)
HIX0008654
HIT000366330 (
NM_001037537
)
(Phytanoyl-CoA dioxygenase, peroxisomal; EC=1.14.11.18; Phytanic acid oxidase; Phytanoyl-CoA alpha-hydroxylase; PhyH; Precursor;)
genome : 13,319,797 - 13,341,746 (21,950)
query : 1 - 1,714 (1,714/1,725)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
EC number :
EC 1.14.11.18
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17.5, cyto_nucl 15, extr 8, nucl 5.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008654)
HIX0008654
HIT000480223 (
ENST00000396913
)
(Phytanoyl-CoA dioxygenase, peroxisomal; EC=1.14.11.18; Phytanic acid oxidase; Phytanoyl-CoA alpha-hydroxylase; PhyH; Precursor;)
genome : 13,319,796 - 13,341,763 (21,968)
query : 1 - 1,732 (1,732/1,732)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
EC number :
EC 1.14.11.18
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17.5, cyto_nucl 15, extr 8, nucl 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008654)
HIX0008654
HIT000069740
(
AF112977
)
Representative transcript
(Phytanoyl-CoA dioxygenase, peroxisomal; EC=1.14.11.18; Phytanic acid oxidase; Phytanoyl-CoA alpha-hydroxylase; PhyH; Precursor;)
genome : 13,319,800 - 13,342,101 (22,302)
query : 1 - 1,578 (1,578/1,578)
9 exons
identity = 0.997
3'(0.998;1.000;1.000;1.000;1.000;1.000;0.991;
1.000;0.985)5'
coverage = 1.000
EC number :
EC 1.14.11.18
InterPro :
IPR008775 : Phytanoyl-CoA dioxygenase
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 11, mito 10, nucl 5, E.R._mito 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008654)
Ortholog candidate ( ->
Evola
)
Rattus
sp. (Rat) : AF121345
Mus
sp. (Mouse) : AK146753
Danio
sp. (Zebrafish) : BC092793
Bos
sp. (Cow) : BC102460
Gallus
sp. (Chicken) : CR353447
Tetraodon
sp. (Tetraodon) : CR726019
Macaca
sp. (Macaque) : ENSMMUT00000043246
Oryzias
sp. (Medaka) : ENSORLT00000011716
Pongo
sp. (Orangutan) : ENSPPYT00000002509
Takifugu
sp. (Fugu) : SINFRUT00000164631
Pan
sp. (Chimpanzee) : XM_001141117
Monodelphis
sp. (Opossum) : XM_001368374
Equus
sp. (Horse) : XM_001498820
Equus
sp. (Horse) : XM_001498968
Canis
sp. (Dog) : XM_535184
HIX0008654
HIT000108717 (
ENST00000263038
)
(Phytanoyl-CoA dioxygenase, peroxisomal; EC=1.14.11.18; Phytanic acid oxidase; Phytanoyl-CoA alpha-hydroxylase; PhyH; Precursor;)
genome : 13,319,800 - 13,342,101 (22,302)
query : 1 - 1,577 (1,577/1,577)
9 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
EC number :
EC 1.14.11.18
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 11, mito 10, nucl 5, E.R._mito 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008654)
HIX0008654
HIT000062713
(
AF023462
)
(Phytanoyl-CoA dioxygenase, peroxisomal; EC=1.14.11.18; Phytanic acid oxidase; Phytanoyl-CoA alpha-hydroxylase; PhyH; Precursor;)
genome : 13,319,800 - 13,342,069 (22,270)
query : 1 - 1,545 (1,545/1,545)
9 exons
identity = 0.999
3'(1.000;1.000;1.000;0.995;1.000;1.000;0.991;
1.000;1.000)5'
coverage = 1.000
EC number :
EC 1.14.11.18
InterPro :
IPR008775 : Phytanoyl-CoA dioxygenase
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 17, cyto 12
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008654)
HIX0008654
HIT000480229 (
ENST00000396920
)
(Phytanoyl-CoA dioxygenase, peroxisomal isoform b.)
genome : 13,319,843 - 13,344,412 (24,570)
query : 1 - 1,829 (1,829/1,829)
9 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
EC number :
EC 1.14.11.18
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 12, cyto 10.5, nucl 8.5, extr 5, mito 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008654)
HIX0008654
HIT000268924
(
CR542055
)
(Phytanoyl-CoA dioxygenase, peroxisomal; EC=1.14.11.18; Phytanic acid oxidase; Phytanoyl-CoA alpha-hydroxylase; PhyH; Precursor;)
genome : 13,320,304 - 13,342,042 (21,739)
query : 1 - 1,014 (1,014/1,014)
9 exons
identity = 0.998
3'(1.000;1.000;1.000;0.995;1.000;1.000;0.991;
1.000;1.000)5'
coverage = 1.000
EC number :
EC 1.14.11.18
InterPro :
IPR008775 : Phytanoyl-CoA dioxygenase
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 17, cyto 12
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008654)
HIX0008654
HIT000551693 (
ENST00000453759
)
(Phytanoyl-CoA dioxygenase, peroxisomal isoform b.)
genome : 13,325,690 - 13,341,549 (15,860)
query : 1 - 883 (883/883)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 1.14.11.18
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14, cyto_nucl 12.5, extr 12, nucl 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008654)
HIX0008654
HIT000583659 (
ENST00000479604
)
(Phytanoyl-CoA dioxygenase, peroxisomal isoform b.)
genome : 13,330,412 - 13,342,052 (11,641)
query : 1 - 642 (642/642)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 1.14.11.18
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 14, cyto 11.5, cyto_nucl 7.5, pero 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008654)
AL645617.9
12000001-12047117 F +
NCBI
AC073160.8
12047118-12234934 F +
NCBI
AL512770.21
12234935-12358080 F +
NCBI
AL391314.21
12358081-12483516 F +
NCBI
AL603717.8
12483517-12490874 F +
NCBI
AL512284.20
12490875-12602795 F +
NCBI
AL731559.8
12602796-12797115 F +
NCBI
AL512783.22
12797116-12896859 F +
NCBI
AL353586.14
12896860-12992467 F +
NCBI
AL596124.6
12992468-13020472 F +
NCBI
AL355355.25
13020473-13214675 F +
NCBI
AL138764.21
13214676-13367447 F +
NCBI
AL355870.23
13367448-13466009 F +
NCBI
AL359172.19
13466010-13491928 F +
NCBI
AL590677.7
13491929-13600000 F +
NCBI