bases per tick :
500
200
100
50
20
10
5
2
kb first site :
main :
All Human Genes
JIGSAW prediction
ESTs assembly
homology :
UCSC
CCDS
Pseudogene.org
Conserved regions (
Segmental duplication
P.troglodytes
P.abelii
M.mulatta
M.musculus
R.norvegicus
C.familiaris
E.caballus
B.taurus
M.domestica
G.gallus
D.rerio
O.latipes
T.nigroviridis
T.rubripes
)
gene prediction :
FGENESH
GenScan
HMMgene
tRNA
show... :
SNPs
ESTs(summary)
ESTs(detail)
CAGE tag(summary)
CAGE tag(detail)
sequence viewer :
( start, end )
( middle, total length )
= (
,
)
HIX0000752
HIT000203935 (
NM_012128
)
(Calcium-activated chloride channel regulator 4; Calcium-activated chloride channel family member 4; hCLCA4; Calcium-activated chloride channel protein 2; CaCC-2; hCaCC-2; Contains: Calcium-activated chloride channel regulator 4, 110 kDa form; Contains: Calcium-activated chloride channel regulator 4, 30 kDa form; Precursor;)
genome : 87,012,759 - 87,046,431 (33,673)
query : 1 - 3,207 (3,207/3,285)
14 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 25, extr 4
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000752)
HIX0000752
HIT000562763 (
NR_024602
)
(Calcium-activated chloride channel regulator 4; Calcium-activated chloride channel family member 4; hCLCA4; Calcium-activated chloride channel protein 2; CaCC-2; hCaCC-2; Contains: Calcium-activated chloride channel regulator 4, 110 kDa form; Contains: Calcium-activated chloride channel regulator 4, 30 kDa form; Precursor;)
genome : 87,012,759 - 87,046,431 (33,673)
query : 1 - 3,098 (3,098/3,115)
13 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 15, nucl 7, cyto 6, E.R. 3, cyto_pero 3,
cyto_golg 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000752)
HIX0000752
HIT000002547
(
AK000072
)
(Conserved hypothetical protein.)
genome : 87,012,761 - 87,046,431 (33,671)
query : 1 - 3,205 (3,205/3,221)
14 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;0.995;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;0.999)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 9, nucl 8.5, cyto_nucl 7.5, extr 6, cyto 5.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000752)
HIX0000752
HIT000351843 (
ENST00000370563
)
(Calcium-activated chloride channel regulator 4; Calcium-activated chloride channel family member 4; hCLCA4; Calcium-activated chloride channel protein 2; CaCC-2; hCaCC-2; Contains: Calcium-activated chloride channel regulator 4, 110 kDa form; Contains: Calcium-activated chloride channel regulator 4, 30 kDa form; Precursor;)
genome : 87,012,761 - 87,046,437 (33,677)
query : 1 - 3,211 (3,211/3,211)
14 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 25, extr 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000752)
HIX0000752
HIT000433296
(
AK314430
)
(Calcium-activated chloride channel regulator 4; Calcium-activated chloride channel family member 4; hCLCA4; Calcium-activated chloride channel protein 2; CaCC-2; hCaCC-2; Contains: Calcium-activated chloride channel regulator 4, 110 kDa form; Contains: Calcium-activated chloride channel regulator 4, 30 kDa form; Precursor;)
genome : 87,012,761 - 87,046,028 (33,268)
query : 1 - 2,800 (2,800/2,800)
14 exons
identity = 0.998
5'(0.990;0.993;1.000;1.000;1.000;0.995;1.000;
1.000;1.000;0.995;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 9, nucl 8.5, cyto_nucl 7.5, extr 6, cyto 5.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000752)
HIX0000752
HIT000387140
(
BC113687
)
(Conserved hypothetical protein.)
genome : 87,012,764 - 87,046,111 (33,348)
query : 1 - 2,876 (2,876/2,876)
14 exons
identity = 0.998
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;0.986)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 9, nucl 8.5, cyto_nucl 7.5, extr 6, cyto 5.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000752)
HIX0000752
HIT000387142
(
BC113689
)
(Conserved hypothetical protein.)
genome : 87,012,766 - 87,046,111 (33,346)
query : 2 - 2,875 (2,874/2,875)
14 exons
identity = 0.997
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;0.994;1.000;0.986)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 9, nucl 8.5, cyto_nucl 7.5, extr 6, cyto 5.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000752)
HIX0000752
HIT000070559
(
AF127035
)
(Conserved hypothetical protein.)
genome : 87,012,775 - 87,046,431 (33,657)
query : 1 - 3,185 (3,185/3,204)
14 exons
identity = 0.998
5'(1.000;1.000;1.000;1.000;1.000;0.995;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;0.993)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 9, nucl 8.5, cyto_nucl 7.5, extr 6, cyto 5.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000752)
HIX0000752
HIT000252514
(
AY358470
)
Representative transcript
(Calcium-activated chloride channel regulator 4; Calcium-activated chloride channel family member 4; hCLCA4; Calcium-activated chloride channel protein 2; CaCC-2; hCaCC-2; Contains: Calcium-activated chloride channel regulator 4, 110 kDa form; Contains: Calcium-activated chloride channel regulator 4, 30 kDa form; Precursor;)
genome : 87,012,779 - 87,046,431 (33,653)
query : 1 - 3,187 (3,187/3,265)
14 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR002035 : von Willebrand factor, type A
IPR004727 : Calcium-activated chloride channel protein
IPR013642 : Chloride channel calcium-activated
IPR015394 : Domain of unknown function DUF1973
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 25, extr 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000752)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK033591
Mus
sp. (Mouse) : AK136515
Rattus
sp. (Rat) : AY333961
Bos
sp. (Cow) : BC103387
Danio
sp. (Zebrafish) : ENSDART00000051966
Monodelphis
sp. (Opossum) : ENSMODT00000010129
Pongo
sp. (Orangutan) : ENSPPYT00000001421
Macaca
sp. (Macaque) : XM_001109489
Gallus
sp. (Chicken) : XM_001234329
Monodelphis
sp. (Opossum) : XM_001362200
Monodelphis
sp. (Opossum) : XM_001362370
Equus
sp. (Horse) : XM_001494684
Equus
sp. (Horse) : XM_001917775
Pan
sp. (Chimpanzee) : XM_524757
Canis
sp. (Dog) : XM_850235
HIX0000752
HIT000426651
(
AK307785
)
(Calcium-activated chloride channel protein family protein.)
genome : 87,012,815 - 87,046,430 (33,616)
query : 1 - 3,035 (3,035/3,035)
13 exons
identity = 0.997
5'(1.000;1.000;0.993;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;0.991)3'
coverage = 1.000
InterPro :
IPR002035 : von Willebrand factor, type A
IPR004727 : Calcium-activated chloride channel protein
IPR013642 : Chloride channel calcium-activated
IPR015394 : Domain of unknown function DUF1973
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 15, nucl 7, cyto 6, E.R. 3, cyto_pero 3,
cyto_golg 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000752)
HIX0000752
HIT000426764
(
AK307898
)
(Calcium-activated chloride channel regulator 4; Calcium-activated chloride channel family member 4; hCLCA4; Calcium-activated chloride channel protein 2; CaCC-2; hCaCC-2; Contains: Calcium-activated chloride channel regulator 4, 110 kDa form; Contains: Calcium-activated chloride channel regulator 4, 30 kDa form; Precursor;)
genome : 87,012,898 - 87,046,041 (33,144)
query : 1 - 2,416 (2,416/2,416)
12 exons
identity = 0.997
5'(1.000;0.993;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;0.986)3'
coverage = 1.000
InterPro :
IPR013642 : Chloride channel calcium-activated
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17.5, cyto_nucl 12.5, cysk 5, nucl 4.5, extr 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000752)
HIX0000752
HIT000109007 (
ENST00000263723
)
(Conserved hypothetical protein.)
genome : 87,012,926 - 87,038,841 (25,916)
query : 1 - 1,604 (1,604/1,604)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 19, nucl 7, mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000752)
HIX0000752
HIT000488390
(
AK293766
)
(Conserved hypothetical protein.)
genome : 87,012,926 - 87,038,841 (25,916)
query : 1 - 1,604 (1,604/1,604)
8 exons
identity = 0.999
5'(1.000;1.000;1.000;0.991;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 19, nucl 7, mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000752)
HIX0161087
HIT000539116 (
ENST00000441182
)
(Conserved hypothetical protein.)
genome : 87,018,308 - 87,019,025 (718)
query : 1 - 718 (718/718)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16, cyto_nucl 14, cyto 8, extr 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0161087)
HIX0000752
HIT000599648 (
ENST00000496322
)
(Calcium-activated chloride channel regulator 4; Calcium-activated chloride channel family member 4; hCLCA4; Calcium-activated chloride channel protein 2; CaCC-2; hCaCC-2; Contains: Calcium-activated chloride channel regulator 4, 110 kDa form; Contains: Calcium-activated chloride channel regulator 4, 30 kDa form; Precursor;)
genome : 87,036,799 - 87,038,639 (1,841)
query : 1 - 482 (482/482)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 15.5, cysk 12, cyto_nucl 11, nucl 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000752)
HIX0000752
HIT000002613
(
AK000138
)
(Calcium-activated chloride channel regulator 4; Calcium-activated chloride channel family member 4; hCLCA4; Calcium-activated chloride channel protein 2; CaCC-2; hCaCC-2; Contains: Calcium-activated chloride channel regulator 4, 110 kDa form; Contains: Calcium-activated chloride channel regulator 4, 30 kDa form; Precursor;)
genome : 87,036,857 - 87,046,431 (9,575)
query : 1 - 1,878 (1,878/1,895)
7 exons
identity = 0.996
5'(1.000;1.000;1.000;1.000;1.000;1.000;0.991)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
pero 9, plas 8, cyto 6, E.R._mito 4, cysk_plas 4,
E.R. 3.5, cyto_golg 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000752)
HIX0161520
HIT000554521 (
ENST00000456587
)
(Conserved hypothetical protein.)
genome : 87,036,864 - 87,158,886 (122,023)
query : 1 - 522 (522/522)
4 exons
identity = 0.992
3'(1.000;1.000;0.973;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0161520)
HIX0028523
HIT000112436 (
ENST00000284054
)
(Calcium-activated chloride channel regulator family member 3; Calcium-activated chloride channel family member 3; hCLCA3; Precursor;)
genome : 87,099,956 - 87,117,349 (17,394)
query : 1 - 2,407 (2,407/2,407)
14 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 30
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028523)
HIX0028523
HIT000063923
(
AF043976
)
Representative transcript
(Calcium-activated chloride channel regulator family member 3; Calcium-activated chloride channel family member 3; hCLCA3; Precursor;)
genome : 87,099,959 - 87,121,059 (21,101)
query : 1 - 3,413 (3,413/3,415)
15 exons
identity = 0.996
5'(0.989;0.986;1.000;0.982;0.994;1.000;1.000;
1.000;1.000;1.000;0.996;0.996;1.000;0.996;
0.997)3'
coverage = 0.999
InterPro :
IPR013642 : Chloride channel calcium-activated
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 30
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028523)
Ortholog candidate ( ->
Evola
)
Rattus
sp. (Rat) : AB119249
Rattus
sp. (Rat) : AB256513
Bos
sp. (Cow) : AF001262
Mus
sp. (Mouse) : AF052746
Mus
sp. (Mouse) : AK161052
Mus
sp. (Mouse) : AY008277
Canis
sp. (Dog) : ENSCAFT00000032239
Danio
sp. (Zebrafish) : ENSDART00000099122
Monodelphis
sp. (Opossum) : ENSMODT00000010205
Pan
sp. (Chimpanzee) : ENSPTRT00000001747
Bos
sp. (Cow) : U36445
Macaca
sp. (Macaque) : XM_001105446
Equus
sp. (Horse) : XM_001495998
Gallus
sp. (Chicken) : XM_422360
HIX0028523
HIT000562765 (
NR_024604
)
(Calcium-activated chloride channel regulator family member 3; Calcium-activated chloride channel family member 3; hCLCA3; Precursor;)
genome : 87,099,959 - 87,121,059 (21,101)
query : 1 - 3,412 (3,412/3,412)
15 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 30
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028523)
HIX0028523
HIT000571107 (
ENST00000466454
)
(Calcium-activated chloride channel regulator family member 3; Calcium-activated chloride channel family member 3; hCLCA3; Precursor;)
genome : 87,099,959 - 87,121,059 (21,101)
query : 1 - 3,412 (3,412/3,412)
15 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 30
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028523)
HIX0028523
HIT000593606 (
ENST00000490028
)
(Calcium-activated chloride channel regulator family member 3; Calcium-activated chloride channel family member 3; hCLCA3; Precursor;)
genome : 87,099,959 - 87,120,428 (20,470)
query : 1 - 2,781 (2,781/2,781)
15 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 30
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028523)
HIX0029248
HIT000093521
(
BC034638
)
Representative transcript
(Hypothetical short protein.)
genome : 87,169,185 - 87,170,145 (961)
query : 1 - 961 (961/975)
1 exon
identity = 0.996
3'(0.996)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029248)
HIX0029248
HIT000678648 (
ENST00000565575
)
(Hypothetical short protein.)
genome : 87,169,185 - 87,170,145 (961)
query : 1 - 961 (961/961)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029248)
HIX0000753
HIT000205786 (
NM_016009
)
(Endophilin-B1; Bax-interacting factor 1; Bif-1; SH3 domain-containing GRB2-like protein B1;)
genome : 87,170,253 - 87,213,867 (43,615)
query : 1 - 6,377 (6,377/6,382)
9 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 0.999
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14.5, cyto_nucl 14, nucl 12.5, cysk 4
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000753)
HIX0000753
HIT000657274 (
NM_001206651
)
(Endophilin-B1 isoform 2.)
genome : 87,170,253 - 87,213,867 (43,615)
query : 1 - 6,464 (6,464/6,469)
10 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 0.999
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17, cyto 11, cysk 4
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000753)
HIX0000753
HIT000657275 (
NM_001206652
)
(Endophilin-B1; Bax-interacting factor 1; Bif-1; SH3 domain-containing GRB2-like protein B1;)
genome : 87,170,253 - 87,213,867 (43,615)
query : 1 - 6,440 (6,440/6,445)
11 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 0.999
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 14, nucl 13.5, cyto 13.5, cysk 4
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000753)
HIX0000753
HIT000657276 (
NM_001206653
)
(Endophilin-B1 isoform 4.)
genome : 87,170,253 - 87,213,867 (43,615)
query : 1 - 6,235 (6,235/6,240)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 0.999
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 18, nucl 17.5, cyto 11.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000753)
HIX0000753
HIT000351838 (
ENST00000370558
)
(Endophilin-B1; Bax-interacting factor 1; Bif-1; SH3 domain-containing GRB2-like protein B1;)
genome : 87,170,259 - 87,213,867 (43,609)
query : 1 - 6,371 (6,371/6,371)
9 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14.5, cyto_nucl 14, nucl 12.5, cysk 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000753)
HIX0000753
HIT000000207
(
AB007960
)
(Endophilin-B1; Bax-interacting factor 1; Bif-1; SH3 domain-containing GRB2-like protein B1;)
genome : 87,170,304 - 87,213,863 (43,560)
query : 17 - 6,335 (6,319/6,335)
9 exons
identity = 0.999
5'(1.000;1.000;0.992;1.000;1.000;1.000;1.000;
1.000;0.999)3'
coverage = 0.997
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14.5, cyto_nucl 14, nucl 12.5, cysk 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000753)
Ortholog candidate ( ->
Evola
)
Macaca
sp. (Macaque) : AB179471
Mus
sp. (Mouse) : AF272946
Gallus
sp. (Chicken) : AJ720723
Danio
sp. (Zebrafish) : BC050954
Rattus
sp. (Rat) : BC079085
Danio
sp. (Zebrafish) : BC092831
Pongo
sp. (Orangutan) : CR859706
Monodelphis
sp. (Opossum) : ENSMODT00000010294
Oryzias
sp. (Medaka) : ENSORLT00000007331
Takifugu
sp. (Fugu) : SINFRUT00000132765
Bos
sp. (Cow) : XM_001254372
Equus
sp. (Horse) : XM_001495916
Canis
sp. (Dog) : XM_850232
Pan
sp. (Chimpanzee) : XR_023492
HIX0000753
HIT000498334
(
AK303710
)
(Endophilin-B1 isoform 4.)
genome : 87,170,300 - 87,209,071 (38,772)
query : 1 - 1,392 (1,392/1,392)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
InterPro :
IPR001452 : SH3 domain
IPR004148 : BAR domain
IPR027267 : Arfaptin homology (AH) domain/BAR domain
IPR028503 : Endophilin-B1
GO :
0005515 : Molecular Function : protein binding
0005737 : Cellular Component : cytoplasm
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 18, nucl 17.5, cyto 11.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000753)
HIX0000753
HIT000634055 (
ENST00000535010
)
(Endophilin-B1 isoform 4.)
genome : 87,170,300 - 87,209,071 (38,772)
query : 1 - 1,392 (1,392/1,392)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 18, nucl 17.5, cyto 11.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000753)
HIX0000753
HIT000384994
(
AK225864
)
(Endophilin-B1; Bax-interacting factor 1; Bif-1; SH3 domain-containing GRB2-like protein B1;)
genome : 87,170,433 - 87,209,005 (38,573)
query : 1 - 1,422 (1,422/1,448)
10 exons
identity = 0.999
5'(1.000;1.000;1.000;0.993;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 0.982
InterPro :
IPR001452 : SH3 domain
IPR004148 : BAR domain
IPR027267 : Arfaptin homology (AH) domain/BAR domain
IPR028503 : Endophilin-B1
GO :
0005515 : Molecular Function : protein binding
0005737 : Cellular Component : cytoplasm
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 14.5, cyto_nucl 14, cyto 12.5, cysk 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000753)
HIX0000753
HIT000004428
(
AK001954
)
(Endophilin-B1; Bax-interacting factor 1; Bif-1; SH3 domain-containing GRB2-like protein B1;)
genome : 87,170,468 - 87,209,269 (38,802)
query : 1 - 1,564 (1,564/1,564)
9 exons
identity = 0.999
5'(1.000;1.000;1.000;0.993;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14.5, cyto_nucl 14, nucl 12.5, cysk 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000753)
HIX0000753
HIT000078208
(
AF350371
)
(Endophilin-B1; Bax-interacting factor 1; Bif-1; SH3 domain-containing GRB2-like protein B1;)
genome : 87,170,504 - 87,209,270 (38,767)
query : 3 - 1,531 (1,529/1,561)
9 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 0.980
InterPro :
IPR001452 : SH3 domain
IPR004148 : BAR domain
IPR027267 : Arfaptin homology (AH) domain/BAR domain
IPR028503 : Endophilin-B1
GO :
0005515 : Molecular Function : protein binding
0005737 : Cellular Component : cytoplasm
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14.5, cyto_nucl 14, nucl 12.5, cysk 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000753)
HIX0000753
HIT000033236
(
BC007455
)
(Endophilin-B1; Bax-interacting factor 1; Bif-1; SH3 domain-containing GRB2-like protein B1;)
genome : 87,170,538 - 87,209,001 (38,464)
query : 1 - 1,226 (1,226/1,244)
9 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 0.999
InterPro :
IPR001452 : SH3 domain
IPR004148 : BAR domain
IPR027267 : Arfaptin homology (AH) domain/BAR domain
IPR028503 : Endophilin-B1
GO :
0005515 : Molecular Function : protein binding
0005737 : Cellular Component : cytoplasm
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14.5, cyto_nucl 14, nucl 12.5, cysk 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000753)
HIX0000753
HIT000071632
(
AF151819
)
(Endophilin-B1; Bax-interacting factor 1; Bif-1; SH3 domain-containing GRB2-like protein B1;)
genome : 87,170,558 - 87,209,273 (38,716)
query : 1 - 1,478 (1,478/1,478)
9 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
InterPro :
IPR001452 : SH3 domain
IPR004148 : BAR domain
IPR027267 : Arfaptin homology (AH) domain/BAR domain
IPR028503 : Endophilin-B1
GO :
0005515 : Molecular Function : protein binding
0005737 : Cellular Component : cytoplasm
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14.5, cyto_nucl 14, nucl 12.5, cysk 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000753)
HIX0000753
HIT000075169
(
AF257318
)
(Endophilin-B1; Bax-interacting factor 1; Bif-1; SH3 domain-containing GRB2-like protein B1;)
genome : 87,170,558 - 87,209,049 (38,492)
query : 1 - 1,254 (1,254/1,266)
9 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 0.991
InterPro :
IPR001452 : SH3 domain
IPR004148 : BAR domain
IPR027267 : Arfaptin homology (AH) domain/BAR domain
IPR028503 : Endophilin-B1
GO :
0005515 : Molecular Function : protein binding
0005737 : Cellular Component : cytoplasm
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14.5, cyto_nucl 14, nucl 12.5, cysk 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000753)
HIX0000753
HIT000075480
(
AF263293
)
Representative transcript
(Endophilin-B1; Bax-interacting factor 1; Bif-1; SH3 domain-containing GRB2-like protein B1;)
genome : 87,170,578 - 87,208,951 (38,374)
query : 1 - 1,199 (1,199/1,199)
11 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.996;1.000)3'
coverage = 1.000
InterPro :
IPR001452 : SH3 domain
IPR004148 : BAR domain
IPR027267 : Arfaptin homology (AH) domain/BAR domain
IPR028503 : Endophilin-B1
GO :
0005515 : Molecular Function : protein binding
0005737 : Cellular Component : cytoplasm
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 14, nucl 13.5, cyto 13.5, cysk 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000753)
HIX0000753
HIT000586431 (
ENST00000482504
)
(Endophilin-B1; Bax-interacting factor 1; Bif-1; SH3 domain-containing GRB2-like protein B1;)
genome : 87,170,578 - 87,208,951 (38,374)
query : 1 - 1,199 (1,199/1,199)
11 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 14, nucl 13.5, cyto 13.5, cysk 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000753)
HIX0000753
HIT000714336 (
ENST00000602603
)
(Endophilin-B1; Bax-interacting factor 1; Bif-1; SH3 domain-containing GRB2-like protein B1;)
genome : 87,199,927 - 87,204,378 (4,452)
query : 1 - 584 (584/584)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 19, nucl 13, cyto 13, extr 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000753)
HIX0200194
HIT000545349 (
ENST00000447415
)
(Ribosomal protein L22/L17 family protein.)
genome : 87,250,596 - 87,251,150 (555)
query : 1 - 555 (555/555)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19.5, cyto_nucl 15, cyto 9.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200194)
HIX0000754
HIT000037553
(
BC016359
)
(15 kDa selenoprotein; Precursor;)
genome : 87,328,132 - 87,379,799 (51,668)
query : 4 - 1,531 (1,528/1,562)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 0.997
InterPro :
IPR012336 : Thioredoxin-like fold
IPR014912 : Sep15/SelM redox
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000754)
HIX0000754
HIT000384770
(
AK225640
)
Representative transcript
(15 kDa selenoprotein; Precursor;)
genome : 87,328,129 - 87,379,797 (51,669)
query : 1 - 1,529 (1,529/1,545)
5 exons
identity = 0.998
3'(0.997;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000754)
Ortholog candidate ( ->
Evola
)
Macaca
sp. (Macaque) : AB178958
Mus
sp. (Mouse) : AF288740
Rattus
sp. (Rat) : AF390544
Danio
sp. (Zebrafish) : BC071511
Bos
sp. (Cow) : BT021503
Gallus
sp. (Chicken) : BX935466
Tetraodon
sp. (Tetraodon) : CR720619
Monodelphis
sp. (Opossum) : ENSMODT00000010307
Oryzias
sp. (Medaka) : ENSORLT00000006094
Pongo
sp. (Orangutan) : ENSPPYT00000001417
Canis
sp. (Dog) : NM_001114760
Takifugu
sp. (Fugu) : SINFRUT00000135561
Equus
sp. (Horse) : XM_001918244
Pan
sp. (Chimpanzee) : XM_513536
HIX0000754
HIT000201020 (
NM_004261
)
(15 kDa selenoprotein; Precursor;)
genome : 87,328,129 - 87,380,107 (51,979)
query : 1 - 1,839 (1,839/1,851)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 32
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000754)
HIX0000754
HIT000319978 (
NM_203341
)
(15 kDa selenoprotein isoform 1 precursor.)
genome : 87,328,129 - 87,380,107 (51,979)
query : 1 - 1,789 (1,789/1,801)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 32
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000754)
HIX0000754
HIT000384382
(
AK225252
)
(15 kDa selenoprotein; Precursor;)
genome : 87,328,133 - 87,379,797 (51,665)
query : 2 - 1,526 (1,525/1,528)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 0.998
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000754)
HIX0000754
HIT000076369
(
AF288991
)
(15 kDa selenoprotein; Precursor;)
genome : 87,328,133 - 87,379,789 (51,657)
query : 1 - 1,517 (1,517/1,519)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 0.999
InterPro :
IPR012336 : Thioredoxin-like fold
IPR014912 : Sep15/SelM redox
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000754)
HIX0000754
HIT000127460 (
ENST00000331835
)
(15 kDa selenoprotein; Precursor;)
genome : 87,328,132 - 87,380,048 (51,917)
query : 1 - 1,777 (1,777/1,777)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000754)
HIX0000754
HIT000028487
(
AL833575
)
(15 kDa selenoprotein; Precursor;)
genome : 87,328,399 - 87,379,809 (51,411)
query : 2 - 1,272 (1,271/1,302)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 0.999
InterPro :
IPR012336 : Thioredoxin-like fold
IPR014912 : Sep15/SelM redox
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000754)
HIX0000754
HIT000032352
(
BC005294
)
(15 kDa selenoprotein; Precursor;)
genome : 87,328,408 - 87,379,815 (51,408)
query : 1 - 1,268 (1,268/1,299)
5 exons
identity = 0.998
3'(0.998;1.000;1.000;1.000;1.000)5'
coverage = 0.998
InterPro :
IPR012336 : Thioredoxin-like fold
IPR014912 : Sep15/SelM redox
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000754)
HIX0000754
HIT000039252
(
BC021697
)
(15 kDa selenoprotein isoform 1 precursor.)
genome : 87,328,412 - 87,379,817 (51,406)
query : 5 - 1,220 (1,216/1,249)
4 exons
identity = 0.998
3'(0.997;1.000;1.000;1.000)5'
coverage = 0.997
InterPro :
IPR012336 : Thioredoxin-like fold
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000754)
HIX0000754
HIT000064274
(
AF051894
)
(15 kDa selenoprotein; Precursor;)
genome : 87,328,406 - 87,379,789 (51,384)
query : 1 - 1,244 (1,244/1,244)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR012336 : Thioredoxin-like fold
IPR014912 : Sep15/SelM redox
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000754)
HIX0000754
HIT000351834 (
ENST00000370554
)
(15 kDa selenoprotein isoform 1 precursor.)
genome : 87,328,408 - 87,379,817 (51,410)
query : 1 - 1,220 (1,220/1,220)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000754)
HIX0000754
HIT000574083 (
ENST00000469566
)
(15 kDa selenoprotein; Precursor;)
genome : 87,328,850 - 87,380,107 (51,258)
query : 1 - 831 (831/831)
5 exons
identity = 0.995
3'(1.000;1.000;1.000;1.000;0.965)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 25, nucl 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000754)
HIX0000754
HIT000483904 (
ENST00000401030
)
(15 kDa selenoprotein isoform 2 precursor.)
genome : 87,328,984 - 87,379,809 (50,826)
query : 1 - 727 (727/727)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000754)
HIX0000754
HIT000601111 (
ENST00000497861
)
(15 kDa selenoprotein; Precursor;)
genome : 87,329,200 - 87,369,035 (39,836)
query : 1 - 266 (266/266)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 19, mito 6, cyto 5.5, cyto_nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000754)
HIX0000754
HIT000572162 (
ENST00000467557
)
(15 kDa selenoprotein; Precursor;)
genome : 87,346,345 - 87,379,748 (33,404)
query : 1 - 492 (492/499)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 0.986
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 14.5, extr 14, cyto_nucl 9.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000754)
HIX0213686
HIT000039919
(
BC025384
)
(Heparan sulfate 2-O-sulfotransferase 1 isoform 2.)
genome : 87,380,331 - 87,564,108 (183,778)
query : 3 - 1,566 (1,564/1,580)
5 exons
identity = 0.997
5'(0.996;1.000;1.000;1.000;0.995)3'
coverage = 0.999
EC number :
EC 2.8.2.-
InterPro :
IPR005331 : Sulfotransferase
IPR007734 : Heparan sulphate 2-O-sulfotransferase
GO :
0008146 : Molecular Function : sulfotransferase activity
0016021 : Cellular Component : integral component of membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 17, E.R. 9, plas 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213686)
HIX0213686
HIT000040055
(
BC025990
)
(Heparan sulfate 2-O-sulfotransferase 1 isoform 2.)
genome : 87,380,331 - 87,564,108 (183,778)
query : 3 - 1,566 (1,564/1,580)
5 exons
identity = 0.997
5'(0.996;1.000;1.000;1.000;0.995)3'
coverage = 0.999
EC number :
EC 2.8.2.-
InterPro :
IPR005331 : Sulfotransferase
IPR007734 : Heparan sulphate 2-O-sulfotransferase
GO :
0008146 : Molecular Function : sulfotransferase activity
0016021 : Cellular Component : integral component of membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 17, E.R. 9, plas 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213686)
HIX0213686
HIT000351831 (
ENST00000370551
)
(Heparan sulfate 2-O-sulfotransferase 1 isoform 2.)
genome : 87,380,331 - 87,564,128 (183,798)
query : 1 - 1,585 (1,585/1,585)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.8.2.-
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 17, E.R. 9, plas 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213686)
HIX0213686
HIT000204043 (
NM_012262
)
(Heparan sulfate 2-O-sulfotransferase 1; 2-O-sulfotransferase; 2OST; EC=2.8.2.-;)
genome : 87,380,335 - 87,575,681 (195,347)
query : 1 - 6,758 (6,758/6,770)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.8.2.-
SOSUI :
MEMBRANE PROTEIN
PSORT :
E.R. 21, plas 3, extr 3, mito 3, extr_plas 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213686)
HIX0213686
HIT000559952 (
NM_001134492
)
(Heparan sulfate 2-O-sulfotransferase 1 isoform 2.)
genome : 87,380,335 - 87,564,125 (183,791)
query : 1 - 1,578 (1,578/1,623)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.8.2.-
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 17, E.R. 9, plas 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213686)
HIX0213686
HIT000351830 (
ENST00000370550
)
(Heparan sulfate 2-O-sulfotransferase 1; 2-O-sulfotransferase; 2OST; EC=2.8.2.-;)
genome : 87,380,357 - 87,575,681 (195,325)
query : 1 - 6,736 (6,736/6,736)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.8.2.-
SOSUI :
MEMBRANE PROTEIN
PSORT :
E.R. 21, plas 3, extr 3, mito 3, extr_plas 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213686)
HIX0213686
HIT000006534
(
AK023260
)
(Heparan sulfate 2-O-sulfotransferase 1; 2-O-sulfotransferase; 2OST; EC=2.8.2.-;)
genome : 87,380,362 - 87,571,901 (191,540)
query : 1 - 2,951 (2,951/2,951)
7 exons
identity = 0.999
5'(0.998;1.000;1.000;0.993;0.990;1.000;0.999)3'
coverage = 1.000
EC number :
EC 2.8.2.-
InterPro :
IPR005331 : Sulfotransferase
IPR007734 : Heparan sulphate 2-O-sulfotransferase
GO :
0008146 : Molecular Function : sulfotransferase activity
0016021 : Cellular Component : integral component of membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
E.R. 19, mito 4, plas 3, extr 3, extr_plas 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213686)
HIX0213686
HIT000058790
(
AB024568
)
(Heparan sulfate 2-O-sulfotransferase 1; 2-O-sulfotransferase; 2OST; EC=2.8.2.-;)
genome : 87,380,367 - 87,571,126 (190,760)
query : 1 - 2,173 (2,173/2,185)
7 exons
identity = 0.997
5'(0.992;1.000;1.000;1.000;1.000;1.000;0.998)3'
coverage = 1.000
EC number :
EC 2.8.2.-
InterPro :
IPR005331 : Sulfotransferase
IPR007734 : Heparan sulphate 2-O-sulfotransferase
GO :
0008146 : Molecular Function : sulfotransferase activity
0016021 : Cellular Component : integral component of membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
E.R. 21, plas 3, extr 3, mito 3, extr_plas 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213686)
HIX0213686
HIT000339139
(
BC108735
)
(Heparan sulfate 2-O-sulfotransferase 1 isoform 2.)
genome : 87,380,390 - 87,564,125 (183,736)
query : 1 - 1,523 (1,523/1,568)
5 exons
identity = 0.998
5'(1.000;1.000;1.000;1.000;0.995)3'
coverage = 1.000
EC number :
EC 2.8.2.-
InterPro :
IPR005331 : Sulfotransferase
IPR007734 : Heparan sulphate 2-O-sulfotransferase
GO :
0008146 : Molecular Function : sulfotransferase activity
0016021 : Cellular Component : integral component of membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 17, E.R. 9, plas 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213686)
HIX0213686
HIT000000165
(
AB007917
)
Representative transcript
(Heparan sulfate 2-O-sulfotransferase 1; 2-O-sulfotransferase; 2OST; EC=2.8.2.-;)
genome : 87,380,438 - 87,575,664 (195,227)
query : 1 - 6,632 (6,632/6,632)
7 exons
identity = 0.998
5'(1.000;1.000;1.000;1.000;1.000;1.000;0.998)3'
coverage = 1.000
EC number :
EC 2.8.2.-
SOSUI :
MEMBRANE PROTEIN
PSORT :
E.R. 21, plas 3, extr 3, mito 3, extr_plas 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213686)
Ortholog candidate ( ->
Evola
)
Gallus
sp. (Chicken) : AB093516
Rattus
sp. (Rat) : AY724508
Mus
sp. (Mouse) : BC025443
Danio
sp. (Zebrafish) : BC129165
Pongo
sp. (Orangutan) : CR860431
Bos
sp. (Cow) : ENSBTAT00000023395
Equus
sp. (Horse) : ENSECAT00000001370
Monodelphis
sp. (Opossum) : ENSMODT00000010329
Oryzias
sp. (Medaka) : ENSORLT00000002793
Oryzias
sp. (Medaka) : ENSORLT00000006114
Pan
sp. (Chimpanzee) : ENSPTRT00000047293
Tetraodon
sp. (Tetraodon) : GSTENT00013371001
Takifugu
sp. (Fugu) : SINFRUT00000135564
Takifugu
sp. (Fugu) : SINFRUT00000140283
Macaca
sp. (Macaque) : XM_001109871
Canis
sp. (Dog) : XM_537087
Danio
sp. (Zebrafish) : XR_044956
HIX0214313
HIT000697742 (
ENST00000585888
)
(Conserved hypothetical protein.)
genome : 87,397,882 - 87,400,574 (2,693)
query : 1 - 746 (746/746)
2 exons
identity = 0.996
3'(0.993;0.998)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 22.5, extr_plas 14.5, plas 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0214313)
HIX0160520
HIT000520351 (
ENST00000422417
)
(Conserved hypothetical protein.)
genome : 87,409,368 - 87,410,425 (1,058)
query : 1 - 233 (233/233)
2 exons
identity = 0.983
3'(1.000;0.978)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0160520)
HIX0213686
HIT000703278 (
ENST00000591456
)
(Heparan sulfate 2-O-sulfotransferase 1; 2-O-sulfotransferase; 2OST; EC=2.8.2.-;)
genome : 87,422,167 - 87,558,271 (136,105)
query : 1 - 540 (540/540)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.8.2.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18.5, cyto_nucl 14.5, nucl 7.5, extr 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213686)
HIX0159825
HIT000518668 (
ENST00000420734
)
(Ubiquitin/SUMO-activating enzyme ubiquitin-like domain containing protein.)
genome : 87,510,618 - 87,511,554 (937)
query : 1 - 937 (937/937)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 24, extr 4, cyto 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0159825)
HIX0161057
HIT000538098 (
ENST00000440164
)
(Ubiquitin-like 1 activating enzyme, catalytic cysteine domain containing protein.)
genome : 87,511,558 - 87,512,383 (826)
query : 1 - 826 (826/826)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 18, nucl 9, E.R._mito 9, mito_pero 9
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0161057)
HIX0213686
HIT000067126
(
AF086247
)
(Conserved hypothetical protein.)
genome : 87,571,414 - 87,571,906 (493)
query : 1 - 493 (493/502)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213686)
HIX0028698
HIT000085888
(
BC000825
)
Representative transcript
(Conserved hypothetical protein.)
genome : 87,594,509 - 87,595,612 (1,104)
query : 1 - 1,104 (1,104/1,120)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 21, nucl 8.5, cyto_nucl 5.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028698)
HIX0000755
HIT000563161 (
NR_026989
)
(Conserved hypothetical protein.)
genome : 87,595,448 - 87,634,885 (39,438)
query : 1 - 1,402 (1,402/1,419)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 19, cyto_nucl 7.5, nucl 7, cyto 6
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000755)
HIX0000755
HIT000573838 (
ENST00000469312
)
(Conserved hypothetical protein.)
genome : 87,595,448 - 87,634,188 (38,741)
query : 1 - 1,298 (1,298/1,298)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 18, cyto 7.5, cyto_nucl 7, nucl 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000755)
HIX0000755
HIT000563160 (
NR_026988
)
(Conserved hypothetical protein.)
genome : 87,595,448 - 87,602,351 (6,904)
query : 1 - 3,039 (3,039/3,125)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, cyto_nucl 9.5, nucl 8.5, cyto 7.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000755)
HIX0000755
HIT000593585 (
ENST00000490006
)
(Conserved hypothetical protein.)
genome : 87,595,457 - 87,634,881 (39,425)
query : 1 - 1,389 (1,389/1,389)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 19, cyto_nucl 7.5, nucl 7, cyto 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000755)
HIX0000755
HIT000575847 (
ENST00000471417
)
(Conserved hypothetical protein.)
genome : 87,595,537 - 87,600,152 (4,616)
query : 1 - 751 (751/751)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, cyto_nucl 9.5, nucl 8.5, cyto 7.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000755)
HIX0000755
HIT000092133
(
BC030523
)
(Conserved hypothetical protein.)
genome : 87,595,553 - 87,602,351 (6,799)
query : 1 - 3,181 (3,181/3,275)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 25, nucl 3, golg 2, mito_nucl 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000755)
HIX0000755
HIT000566848 (
ENST00000461990
)
(Conserved hypothetical protein.)
genome : 87,595,553 - 87,602,352 (6,800)
query : 1 - 3,181 (3,181/3,181)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 25, nucl 3, golg 2, mito_nucl 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000755)
HIX0000755
HIT000563157 (
NR_026985
)
(Conserved hypothetical protein.)
genome : 87,597,609 - 87,602,351 (4,743)
query : 1 - 3,343 (3,343/3,429)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 9, cyto_mito 8.83333, cyto 8.5, mito 7.5,
cyto_pero 7.16667, cyto_nucl 6.33333, nucl 2.5, pero 2.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000755)
HIX0000755
HIT000563158 (
NR_026986
)
(Conserved hypothetical protein.)
genome : 87,597,609 - 87,602,351 (4,743)
query : 1 - 3,143 (3,143/3,229)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16.5, cyto_nucl 11, extr 10, cyto 4.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000755)
HIX0000755
HIT000563159 (
NR_026987
)
(Conserved hypothetical protein.)
genome : 87,597,609 - 87,602,351 (4,743)
query : 1 - 3,136 (3,136/3,222)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 19, nucl 5.5, cyto_nucl 5.5, cyto 4.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000755)
HIX0000755
HIT000096910
(
BC041867
)
Representative transcript
(Conserved hypothetical protein.)
genome : 87,597,638 - 87,602,351 (4,714)
query : 1 - 3,315 (3,315/3,401)
4 exons
identity = 0.999
5'(0.997;1.000;1.000;0.999)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 9, cyto_mito 8.83333, cyto 8.5, mito 7.5,
cyto_pero 7.16667, cyto_nucl 6.33333, nucl 2.5, pero 2.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000755)
HIX0000755
HIT000702481 (
ENST00000590653
)
(Conserved hypothetical protein.)
genome : 87,597,638 - 87,602,352 (4,715)
query : 1 - 3,315 (3,315/3,315)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 9, cyto_mito 8.83333, cyto 8.5, mito 7.5,
cyto_pero 7.16667, cyto_nucl 6.33333, nucl 2.5, pero 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000755)
HIX0000755
HIT000580626 (
ENST00000476432
)
(Conserved hypothetical protein.)
genome : 87,597,652 - 87,599,814 (2,163)
query : 1 - 556 (556/556)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 19, nucl 5.5, cyto_nucl 5.5, cyto 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000755)
HIX0000755
HIT000043543
(
AK123670
)
(Conserved hypothetical protein.)
genome : 87,597,658 - 87,600,278 (2,621)
query : 1 - 2,376 (2,376/2,376)
2 exons
identity = 1.000
5'(0.999;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, mito 10, cyto_nucl 3, nucl 2.5, cyto 2.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000755)
HIX0000755
HIT000572049 (
ENST00000467438
)
(Conserved hypothetical protein.)
genome : 87,597,658 - 87,600,278 (2,621)
query : 1 - 2,375 (2,375/2,375)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, mito 10, cyto_nucl 3, nucl 2.5, cyto 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000755)
HIX0000755
HIT000388832
(
BC126240
)
(Conserved hypothetical protein.)
genome : 87,597,680 - 87,598,718 (1,039)
query : 1 - 1,039 (1,039/1,039)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, mito 10, cyto_nucl 3, nucl 2.5, cyto 2.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000755)
HIX0000755
HIT000390914
(
BC132861
)
(Conserved hypothetical protein.)
genome : 87,597,680 - 87,598,718 (1,039)
query : 1 - 1,039 (1,039/1,039)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, mito 10, cyto_nucl 3, nucl 2.5, cyto 2.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000755)
HIX0000755
HIT000028264
(
AL833352
)
(Conserved hypothetical protein.)
genome : 87,597,686 - 87,602,352 (4,667)
query : 1 - 3,369 (3,369/3,388)
4 exons
identity = 0.999
5'(1.000;1.000;1.000;0.999)3'
coverage = 0.999
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 19, cyto_nucl 7, nucl 6, cyto 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000755)
HIX0000755
HIT000588759 (
ENST00000484933
)
(Conserved hypothetical protein.)
genome : 87,597,686 - 87,602,352 (4,667)
query : 1 - 3,368 (3,368/3,368)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 19, cyto_nucl 7, nucl 6, cyto 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000755)
HIX0000755
HIT000699009 (
ENST00000587165
)
(Conserved hypothetical protein.)
genome : 87,597,738 - 87,627,820 (30,083)
query : 1 - 426 (426/426)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 31
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000755)
HIX0000755
HIT000701294 (
ENST00000589455
)
(Conserved hypothetical protein.)
genome : 87,597,738 - 87,599,875 (2,138)
query : 1 - 538 (538/538)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 11, cyto_nucl 10.1667, nucl 9.5, cyto 5.5,
extr_plas 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000755)
HIX0116377
HIT000427898
(
AK309032
)
Representative transcript
(Disrupted in schizophrenia 1 protein isoform c.)
genome : 87,678,352 - 87,717,014 (38,663)
query : 1 - 1,152 (1,152/1,152)
4 exons
identity = 0.997
5'(1.000;1.000;1.000;0.996)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, nucl 7, mito 6, cyto_nucl 5.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0116377)
HIX0000756
HIT000203343 (
NM_006769
)
(LIM domain transcription factor LMO4; Breast tumor autoantigen; LIM domain only protein 4; LMO-4;)
genome : 87,794,151 - 87,814,605 (20,455)
query : 1 - 5,404 (5,404/5,415)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000756)
HIX0000756
HIT000351824 (
ENST00000370544
)
(LIM domain transcription factor LMO4; Breast tumor autoantigen; LIM domain only protein 4; LMO-4;)
genome : 87,794,151 - 87,812,788 (18,638)
query : 1 - 3,587 (3,587/3,587)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000756)
HIX0000756
HIT000218746
(
U24576
)
Representative transcript
(LIM domain transcription factor LMO4; Breast tumor autoantigen; LIM domain only protein 4; LMO-4;)
genome : 87,794,151 - 87,811,263 (17,113)
query : 1 - 2,063 (2,063/2,080)
5 exons
identity = 0.999
5'(0.997;1.000;1.000;1.000;0.999)3'
coverage = 1.000
InterPro :
IPR001781 : Zinc finger, LIM-type
GO :
0008270 : Molecular Function : zinc ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000756)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK159590
Danio
sp. (Zebrafish) : BC045835
Danio
sp. (Zebrafish) : BC076053
Rattus
sp. (Rat) : BC087700
Bos
sp. (Cow) : BC104582
Gallus
sp. (Chicken) : CR386592
Danio
sp. (Zebrafish) : ENSDART00000074551
Monodelphis
sp. (Opossum) : ENSMODT00000010337
Oryzias
sp. (Medaka) : ENSORLT00000002806
Pongo
sp. (Orangutan) : ENSPPYT00000001413
Tetraodon
sp. (Tetraodon) : GSTENT00004697001
Takifugu
sp. (Fugu) : SINFRUT00000167198
Macaca
sp. (Macaque) : XM_001110240
Pan
sp. (Chimpanzee) : XM_001144448
Equus
sp. (Horse) : XM_001495584
Canis
sp. (Dog) : XM_537086
HIX0000756
HIT000425375
(
AK292578
)
(LIM domain transcription factor LMO4; Breast tumor autoantigen; LIM domain only protein 4; LMO-4;)
genome : 87,794,549 - 87,810,757 (16,209)
query : 1 - 1,158 (1,158/1,158)
5 exons
identity = 0.998
5'(1.000;1.000;1.000;1.000;0.993)3'
coverage = 1.000
InterPro :
IPR001781 : Zinc finger, LIM-type
GO :
0008270 : Molecular Function : zinc ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000756)
HIX0000756
HIT000038075
(
BC017673
)
(LIM domain transcription factor LMO4; Breast tumor autoantigen; LIM domain only protein 4; LMO-4;)
genome : 87,794,663 - 87,811,071 (16,409)
query : 1 - 1,358 (1,358/1,387)
5 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;0.998)3'
coverage = 1.000
InterPro :
IPR001781 : Zinc finger, LIM-type
GO :
0008270 : Molecular Function : zinc ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000756)
HIX0000756
HIT000599064 (
ENST00000495705
)
(LIM domain transcription factor LMO4; Breast tumor autoantigen; LIM domain only protein 4; LMO-4;)
genome : 87,794,782 - 87,805,315 (10,534)
query : 1 - 565 (565/565)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000756)
HIX0000756
HIT000031631
(
BC003600
)
(LIM domain transcription factor LMO4; Breast tumor autoantigen; LIM domain only protein 4; LMO-4;)
genome : 87,794,788 - 87,811,071 (16,284)
query : 1 - 1,233 (1,233/1,265)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR001781 : Zinc finger, LIM-type
GO :
0008270 : Molecular Function : zinc ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000756)
HIX0000756
HIT000351822 (
ENST00000370542
)
(LIM domain transcription factor LMO4; Breast tumor autoantigen; LIM domain only protein 4; LMO-4;)
genome : 87,797,351 - 87,811,091 (13,741)
query : 1 - 1,260 (1,260/1,260)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000756)
HIX0000756
HIT000251734
(
AY321514
)
(Non-protein coding transcript.)
genome : 87,797,351 - 87,797,716 (366)
query : 1 - 168 (168/168)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000756)
HIX0000756
HIT000262058
(
BC065818
)
(LIM domain transcription factor LMO4; Breast tumor autoantigen; LIM domain only protein 4; LMO-4;)
genome : 87,797,427 - 87,811,071 (13,645)
query : 1 - 1,164 (1,164/1,193)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR001781 : Zinc finger, LIM-type
GO :
0008270 : Molecular Function : zinc ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000756)
HIX0000756
HIT000592910 (
ENST00000489303
)
(LIM domain transcription factor LMO4; Breast tumor autoantigen; LIM domain only protein 4; LMO-4;)
genome : 87,797,464 - 87,810,698 (13,235)
query : 1 - 952 (952/952)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000756)
HIX0029353
HIT000097729
(
BC043534
)
Representative transcript
(Conserved hypothetical protein.)
genome : 87,819,211 - 87,837,338 (18,128)
query : 1 - 885 (885/995)
4 exons
identity = 0.999
3'(1.000;0.997;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 21, nucl 5.5, cyto_nucl 5.5, cyto 4.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029353)
HIX0029353
HIT000660260 (
NR_038324
)
(Hypothetical short protein.)
genome : 87,819,211 - 87,837,338 (18,128)
query : 1 - 885 (885/919)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 21, nucl 5.5, cyto_nucl 5.5, cyto 4.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029353)
HIX0029353
HIT000550443 (
ENST00000452509
)
(Hypothetical short protein.)
genome : 87,819,207 - 87,837,338 (18,132)
query : 1 - 889 (889/889)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 21, nucl 5.5, cyto_nucl 5.5, cyto 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029353)
HIX0214133
HIT000344077 (
ENST00000362448
)
(Non-protein coding transcript.)
genome : 87,918,923 - 87,919,056 (134)
query : 1 - 134 (134/134)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0214133)
HIX0000757
HIT000014290
(
AK057683
)
Representative transcript
(Hypothetical protein.)
genome : 88,270,969 - 88,274,055 (3,087)
query : 1 - 3,087 (3,087/3,087)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 13.5, cyto_mito 13.5, mito 12.5, plas 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000757)
HIX0160964
HIT000535532 (
ENST00000437598
)
(Hypothetical short protein.)
genome : 88,365,592 - 88,371,397 (5,806)
query : 1 - 787 (787/787)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 13, mito 8, cyto_nucl 6.5, extr_plas 6.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0160964)
HIX0214381
HIT000004653
(
AK002179
)
Representative transcript
(Conserved hypothetical protein.)
genome : 87,458,690 - 87,634,884 (176,195)
query : 5 - 2,016 (2,012/2,016)
8 exons
identity = 0.999
5'(0.992;1.000;1.000;1.000;1.000;1.000;1.000;
0.999)3'
coverage = 0.998
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, cyto_nucl 13.5, nucl 9, extr 2, mito 2,
pero 2, mito_pero 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0214381)
HIX0214381
HIT000351828 (
ENST00000370548
)
(Sulfotransferase family protein.)
genome : 87,458,692 - 87,634,884 (176,193)
query : 1 - 2,010 (2,010/2,010)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, cyto_nucl 13.5, nucl 9, extr 2, mito 2,
pero 2, mito_pero 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0214381)
HIX0214381
HIT000310751 (
ENST00000356813
)
(Sulfotransferase family protein.)
genome : 87,458,765 - 87,602,334 (143,570)
query : 1 - 3,558 (3,558/3,558)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 13, nucl 12.5, cyto 12.5, mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0214381)
AL122002.16
87000001-87046477 F +
NCBI
AL356270.11
87046478-87148117 F +
NCBI
AL049597.29
87148118-87271964 F -
NCBI
AL355981.6
87271965-87300238 F +
NCBI
AL121989.12
87300239-87425436 F +
NCBI
AC093155.2
87425437-87597674 F +
NCBI
AL139139.9
87597675-87677973 F +
NCBI
AC099062.2
87677974-87777813 F -
NCBI
AC092392.2
87777814-87850616 F +
NCBI
AC104838.3
87850617-87952311 F +
NCBI
AC103552.1
87952312-88070136 F +
NCBI
AC099064.2
88070137-88117691 F +
NCBI
BX649207.1
88117692-88127134 F +
NCBI
AL356103.8
88127135-88237203 F +
NCBI
AL590786.5
88237204-88241311 F +
NCBI
AL445437.4
88241312-88343405 F +
NCBI
AL355144.16
88343406-88478616 F +
NCBI
AC098932.3
88478617-88595322 F +
NCBI
AC093432.2
88595323-88600000 F +
NCBI