bases per tick :
500
200
100
50
20
10
5
2
kb first site :
main :
All Human Genes
JIGSAW prediction
ESTs assembly
homology :
UCSC
CCDS
Pseudogene.org
Conserved regions (
Segmental duplication
P.troglodytes
P.abelii
M.mulatta
M.musculus
R.norvegicus
C.familiaris
E.caballus
B.taurus
M.domestica
G.gallus
D.rerio
O.latipes
T.nigroviridis
T.rubripes
)
gene prediction :
FGENESH
GenScan
HMMgene
tRNA
show... :
SNPs
ESTs(summary)
ESTs(detail)
CAGE tag(summary)
CAGE tag(detail)
sequence viewer :
( start, end )
( middle, total length )
= (
,
)
HIX0023637
HIT000001080
(
AB037786
)
Representative transcript
(Conserved hypothetical protein.)
genome : 70,501,841 - 70,589,164 (87,324)
query : 1 - 4,150 (4,150/4,150)
8 exons
identity = 0.999
5'(0.987;0.995;0.999;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18, cyto_nucl 15, cyto 10
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023637)
HIX0023637
HIT000057590
(
BX648943
)
(Conserved hypothetical protein.)
genome : 70,554,692 - 70,562,271 (7,580)
query : 1 - 7,581 (7,581/7,597)
1 exon
identity = 0.999
5'(0.999)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15, cyto_nucl 14, nucl 9, extr 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023637)
HIX0023637
HIT000700355 (
ENST00000588515
)
(PDZ domain containing protein.)
genome : 70,573,433 - 70,613,688 (40,256)
query : 1 - 775 (775/775)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, mito 12, cyto_nucl 9.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023637)
HIX0023637
HIT000094796
(
BC037323
)
(Hypothetical short protein.)
genome : 70,607,065 - 70,610,043 (2,979)
query : 1 - 2,979 (2,979/2,996)
1 exon
identity = 0.999
5'(0.999)3'
coverage = 0.999
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 9, cyto_nucl 9, mito 8, cyto 7, extr 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023637)
HIX0023637
HIT000678683 (
ENST00000565615
)
(Hypothetical short protein.)
genome : 70,607,065 - 70,610,047 (2,983)
query : 1 - 2,983 (2,983/2,983)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 9, cyto_nucl 9, mito 8, cyto 7, extr 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023637)
HIX0023637
HIT000056708
(
BX648061
)
(Hypothetical short protein.)
genome : 70,608,335 - 70,610,043 (1,709)
query : 2 - 1,705 (1,704/1,720)
1 exon
identity = 0.994
5'(0.994)3'
coverage = 0.998
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 12, nucl 10, cyto_nucl 8, cyto 4, mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023637)
HIX0000692
HIT000206637 (
NM_017768
)
(Leucine-rich repeat-containing protein 40;)
genome : 70,610,485 - 70,671,361 (60,877)
query : 1 - 2,945 (2,945/2,958)
15 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21.5, cyto_nucl 16, nucl 9.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000692)
HIX0000692
HIT000002813
(
AK000338
)
(Leucine-rich repeat-containing protein 40.)
genome : 70,610,488 - 70,653,002 (42,515)
query : 1 - 2,454 (2,454/2,470)
13 exons
identity = 0.998
3'(0.995;1.000;1.000;1.000;1.000;1.000;0.978;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 24.5, cyto_nucl 16, nucl 6.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000692)
HIX0000692
HIT000384467
(
AK225337
)
(Leucine-rich repeat-containing protein 40.)
genome : 70,610,488 - 70,653,002 (42,515)
query : 1 - 2,454 (2,454/2,470)
13 exons
identity = 0.998
3'(0.995;1.000;1.000;1.000;1.000;1.000;0.978;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR001611 : Leucine-rich repeat
IPR003591 : Leucine-rich repeat, typical subtype
IPR025875 : Leucine rich repeat 4
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 24.5, cyto_nucl 16, nucl 6.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000692)
HIX0000692
HIT000026246
(
AL162076
)
(Leucine-rich repeat-containing protein 40.)
genome : 70,610,488 - 70,621,412 (10,925)
query : 1 - 1,517 (1,517/1,533)
5 exons
identity = 0.999
3'(0.999;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR001611 : Leucine-rich repeat
IPR003591 : Leucine-rich repeat, typical subtype
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 16, cyto 14, cyto_plas 10, nucl 8.5, pero 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000692)
HIX0000692
HIT000031550
(
BC003407
)
(Leucine-rich repeat-containing protein 40.)
genome : 70,610,496 - 70,671,161 (60,666)
query : 1 - 2,734 (2,734/2,754)
15 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
InterPro :
IPR001611 : Leucine-rich repeat
IPR003591 : Leucine-rich repeat, typical subtype
IPR025875 : Leucine rich repeat 4
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21, cyto_nucl 16, nucl 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000692)
HIX0000692
HIT000033848
(
BC008586
)
(Leucine-rich repeat-containing protein 40;)
genome : 70,610,496 - 70,671,259 (60,764)
query : 1 - 2,832 (2,832/2,846)
15 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
InterPro :
IPR001611 : Leucine-rich repeat
IPR003591 : Leucine-rich repeat, typical subtype
IPR025875 : Leucine rich repeat 4
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21.5, cyto_nucl 16, nucl 9.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000692)
HIX0000692
HIT000352232 (
ENST00000370952
)
(Leucine-rich repeat-containing protein 40;)
genome : 70,610,488 - 70,671,303 (60,816)
query : 1 - 2,884 (2,884/2,884)
15 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21.5, cyto_nucl 16, nucl 9.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000692)
HIX0000692
HIT000006225
(
AK022951
)
Representative transcript
(Leucine-rich repeat-containing protein 40;)
genome : 70,610,497 - 70,671,275 (60,779)
query : 1 - 2,847 (2,847/2,847)
15 exons
identity = 0.999
3'(0.997;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
InterPro :
IPR001611 : Leucine-rich repeat
IPR003591 : Leucine-rich repeat, typical subtype
IPR025875 : Leucine rich repeat 4
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21.5, cyto_nucl 16, nucl 9.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000692)
Ortholog candidate ( ->
Evola
)
Macaca
sp. (Macaque) : AB179219
Gallus
sp. (Chicken) : AJ719704
Mus
sp. (Mouse) : AK034978
Danio
sp. (Zebrafish) : AY394934
Rattus
sp. (Rat) : BC105888
Bos
sp. (Cow) : BC126740
Pongo
sp. (Orangutan) : CR857209
Oryzias
sp. (Medaka) : ENSORLT00000003162
Takifugu
sp. (Fugu) : SINFRUT00000160917
Monodelphis
sp. (Opossum) : XM_001379417
Equus
sp. (Horse) : XM_001498277
Pan
sp. (Chimpanzee) : XM_513483
Canis
sp. (Dog) : XM_547338
HIX0023637
HIT000539764 (
ENST00000441830
)
(Hypothetical short protein.)
genome : 70,612,804 - 70,617,628 (4,825)
query : 1 - 390 (390/390)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17, extr 13
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023637)
HIX0213707
HIT000568651 (
ENST00000463877
)
(RNA recognition motif domain containing protein.)
genome : 70,671,381 - 70,694,410 (23,030)
query : 1 - 617 (617/617)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto_nucl 15, nucl 13, cyto 13, extr 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213707)
HIX0213707
HIT000430050
(
AK311184
)
(Serine/arginine-rich splicing factor 11; Arginine-rich 54 kDa nuclear protein; p54; Splicing factor, arginine/serine-rich 11;)
genome : 70,671,407 - 70,694,893 (23,487)
query : 1 - 847 (847/847)
2 exons
identity = 0.999
5'(1.000;0.999)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto_nucl 11.3333, cyto 10, nucl 7.5, extr 7,
cyto_pero 6.66667, mito 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213707)
HIX0213707
HIT000429532
(
AK310666
)
(Serine/arginine-rich splicing factor 11; Arginine-rich 54 kDa nuclear protein; p54; Splicing factor, arginine/serine-rich 11;)
genome : 70,671,438 - 70,695,717 (24,280)
query : 1 - 1,210 (1,210/1,210)
4 exons
identity = 0.999
5'(1.000;0.996;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR000504 : RNA recognition motif domain
IPR012677 : Nucleotide-binding alpha-beta plait domain
GO :
0000166 : Molecular Function : nucleotide binding
0003676 : Molecular Function : nucleic acid binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 15, nucl 13.5, cyto 11.5, extr 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213707)
HIX0160509
HIT000520041 (
ENST00000422107
)
(Hypothetical short protein.)
genome : 70,684,272 - 70,686,706 (2,435)
query : 1 - 457 (457/457)
2 exons
identity = 0.987
3'(1.000;0.971)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0160509)
HIX0213707
HIT000578258 (
ENST00000473950
)
(Conserved hypothetical protein.)
genome : 70,687,152 - 70,698,058 (10,907)
query : 1 - 796 (796/796)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 14, nucl 12.5, cyto 12.5, extr 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213707)
HIX0213707
HIT000005016
(
AK021742
)
(Conserved hypothetical protein.)
genome : 70,692,690 - 70,694,681 (1,992)
query : 1 - 1,992 (1,992/1,992)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 30
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213707)
HIX0213707
HIT000567925 (
ENST00000463116
)
(Conserved hypothetical protein.)
genome : 70,695,747 - 70,696,957 (1,211)
query : 1 - 735 (735/735)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 21, cyto_nucl 5, cyto 4.5, mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213707)
HIX0213707
HIT000027191
(
AL832279
)
Representative transcript
(Serine/arginine-rich splicing factor 11; Arginine-rich 54 kDa nuclear protein; p54; Splicing factor, arginine/serine-rich 11;)
genome : 70,697,231 - 70,717,684 (20,454)
query : 1 - 3,034 (3,034/3,075)
10 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.999)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 11, pero 5, plas 4.5, cyto 4.5, extr_plas 4.5,
extr 3.5, cyto_mito 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213707)
HIX0213707
HIT000352229 (
ENST00000370949
)
(Conserved hypothetical protein.)
genome : 70,697,231 - 70,717,684 (20,454)
query : 1 - 3,034 (3,034/3,034)
10 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 11, pero 5, plas 4.5, cyto 4.5, extr_plas 4.5,
extr 3.5, cyto_mito 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213707)
HIX0213707
HIT000055547
(
BX641004
)
(Conserved hypothetical protein.)
genome : 70,700,388 - 70,718,731 (18,344)
query : 1 - 3,242 (3,242/3,272)
9 exons
identity = 0.996
5'(0.988;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.995)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 21, cyto 10
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213707)
HIX0213707
HIT000568634 (
ENST00000463859
)
(Conserved hypothetical protein.)
genome : 70,703,164 - 70,716,681 (13,518)
query : 1 - 1,035 (1,035/1,035)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 21, cyto 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213707)
HIX0213707
HIT000067394
(
AF086515
)
(Hypothetical short protein.)
genome : 70,711,968 - 70,712,505 (538)
query : 1 - 538 (538/547)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22, cyto_nucl 15, nucl 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213707)
HIX0213707
HIT000565711 (
ENST00000460795
)
(Conserved hypothetical protein.)
genome : 70,712,413 - 70,716,408 (3,996)
query : 1 - 528 (528/528)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 27, extr 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213707)
HIX0213707
HIT000054464
(
BX537679
)
(Serine/arginine-rich splicing factor 11 isoform 2.)
genome : 70,714,077 - 70,717,684 (3,608)
query : 5 - 3,506 (3,502/3,530)
2 exons
identity = 0.998
5'(0.999;0.997)3'
coverage = 0.997
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, nucl 14
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213707)
HIX0213707
HIT000566796 (
ENST00000461935
)
(Conserved hypothetical protein.)
genome : 70,714,077 - 70,717,684 (3,608)
query : 1 - 3,501 (3,501/3,501)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 20, cyto 7, mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213707)
HIX0213707
HIT000592803 (
ENST00000489188
)
(Conserved hypothetical protein.)
genome : 70,715,425 - 70,716,629 (1,205)
query : 1 - 784 (784/784)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 28, cyto 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213707)
HIX0213707
HIT000059925
(
AB062486
)
(Conserved hypothetical protein.)
genome : 70,716,598 - 70,717,684 (1,087)
query : 1 - 1,087 (1,087/1,102)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 12, mito 10, mito_nucl 7, cyto 5, plas 2, nucl 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213707)
HIX0000694
HIT000209969 (
NM_030816
)
(Ankyrin repeat domain-containing protein 13C;)
genome : 70,724,685 - 70,820,417 (95,733)
query : 1 - 5,667 (5,667/5,682)
13 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16, cyto_nucl 15.5, cyto 13
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000694)
HIX0000694
HIT000352224 (
ENST00000370944
)
(Ankyrin repeat domain-containing protein 13C;)
genome : 70,726,271 - 70,820,405 (94,135)
query : 1 - 4,069 (4,069/4,069)
13 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16, cyto_nucl 15.5, cyto 13
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000694)
HIX0000694
HIT000014967
(
AK074187
)
(Ankyrin repeat domain-containing protein 13C.)
genome : 70,726,286 - 70,758,234 (31,949)
query : 2 - 2,690 (2,689/2,690)
5 exons
identity = 0.998
3'(0.997;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR021832 : Ankyrin repeat domain-containing protein 13
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18, cyto_nucl 11, mito 9, extr 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000694)
HIX0000694
HIT000025313
(
AL136717
)
(Ankyrin repeat domain-containing protein 13C.)
genome : 70,726,920 - 70,820,417 (93,498)
query : 1 - 3,328 (3,328/3,346)
12 exons
identity = 0.998
3'(0.999;1.000;1.000;0.988;0.994;1.000;1.000;
1.000;1.000;1.000;1.000;0.997)5'
coverage = 1.000
InterPro :
IPR020683 : Ankyrin repeat-containing domain
IPR021832 : Ankyrin repeat domain-containing protein 13
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16, cyto_nucl 15.5, cyto 13
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000694)
HIX0000694
HIT000108365 (
ENST00000262346
)
(Ankyrin repeat domain-containing protein 13C.)
genome : 70,726,920 - 70,820,417 (93,498)
query : 1 - 3,327 (3,327/3,327)
12 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16, cyto_nucl 15.5, cyto 13
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000694)
HIX0000694
HIT000040639
(
BC028840
)
Representative transcript
(Ankyrin repeat domain-containing protein 13C;)
genome : 70,727,549 - 70,820,405 (92,857)
query : 2 - 2,791 (2,790/2,800)
13 exons
identity = 0.999
3'(0.999;1.000;1.000;0.988;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;0.997)5'
coverage = 1.000
InterPro :
IPR002110 : Ankyrin repeat
IPR020683 : Ankyrin repeat-containing domain
IPR021832 : Ankyrin repeat domain-containing protein 13
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 15.5, nucl 15, cyto 14
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000694)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK135906
Bos
sp. (Cow) : BC142326
Danio
sp. (Zebrafish) : BC161648
Tetraodon
sp. (Tetraodon) : CR663348
Monodelphis
sp. (Opossum) : ENSMODT00000000654
Oryzias
sp. (Medaka) : ENSORLT00000009727
Oryzias
sp. (Medaka) : ENSORLT00000021699
Pongo
sp. (Orangutan) : ENSPPYT00000001495
Tetraodon
sp. (Tetraodon) : GSTENT00016197001
Takifugu
sp. (Fugu) : SINFRUT00000164416
Takifugu
sp. (Fugu) : SINFRUT00000173479
Rattus
sp. (Rat) : XM_001062165
Macaca
sp. (Macaque) : XM_001098568
Pan
sp. (Chimpanzee) : XM_001166457
Equus
sp. (Horse) : XM_001499345
Canis
sp. (Dog) : XM_547336
HIX0000694
HIT000568997 (
ENST00000464236
)
(Ankyrin repeat domain-containing protein 13C.)
genome : 70,727,957 - 70,742,526 (14,570)
query : 1 - 809 (809/809)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17, cyto_nucl 16, nucl 13
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000694)
HIX0000694
HIT000594388 (
ENST00000490846
)
(Ankyrin repeat domain-containing protein 13C.)
genome : 70,757,829 - 70,779,473 (21,645)
query : 1 - 794 (794/794)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 12.5, cyto_nucl 11.5, cysk 9, nucl 7.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000694)
HIX0000694
HIT000601943 (
ENST00000498735
)
(Ankyrin repeat domain-containing protein 13C.)
genome : 70,771,369 - 70,790,640 (19,272)
query : 1 - 530 (530/530)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 18, cyto 7.5, cyto_nucl 7.5, nucl 6.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000694)
HIX0000694
HIT000050662
(
BC016937
)
(Ankyrin repeat domain-containing protein 13C.)
genome : 70,818,486 - 70,820,399 (1,914)
query : 1 - 1,914 (1,914/1,929)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
InterPro :
IPR021832 : Ankyrin repeat domain-containing protein 13
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, cyto 13, cyto_nucl 9.5, nucl 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000694)
HIX0000694
HIT000095707
(
BC039441
)
(Hypothetical short protein.)
genome : 70,818,494 - 70,819,612 (1,119)
query : 1 - 1,119 (1,119/1,134)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 19, mito 6, cyto_nucl 3.66667, mito_pero 3.66667,
cyto 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000694)
HIX0000694
HIT000097192
(
BC042365
)
(Hypothetical short protein.)
genome : 70,818,494 - 70,819,612 (1,119)
query : 1 - 1,119 (1,119/1,134)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 19, mito 6, cyto_nucl 3.66667, mito_pero 3.66667,
cyto 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000694)
HIX0021290
HIT000315018 (
ENST00000361764
)
(Conserved hypothetical protein.)
genome : 70,820,488 - 70,833,594 (13,107)
query : 1 - 692 (692/692)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 25, cyto 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021290)
HIX0021290
HIT000365976 (
NM_001031693
)
(Conserved hypothetical protein.)
genome : 70,820,493 - 70,833,704 (13,212)
query : 1 - 801 (801/818)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, cyto 7.5, cyto_nucl 7.5, nucl 6.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021290)
HIX0021290
HIT000366266 (
NM_001036645
)
(Conserved hypothetical protein.)
genome : 70,820,493 - 70,833,704 (13,212)
query : 1 - 898 (898/915)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 23, cyto 7
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021290)
HIX0021290
HIT000366267 (
NM_001036646
)
(Conserved hypothetical protein.)
genome : 70,820,493 - 70,833,704 (13,212)
query : 1 - 797 (797/814)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 25, cyto 4
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021290)
HIX0021290
HIT000563468 (
NR_027404
)
(Conserved hypothetical protein.)
genome : 70,820,493 - 70,833,704 (13,212)
query : 1 - 849 (849/866)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 25, cyto 4
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021290)
HIX0021290
HIT000313339 (
ENST00000359875
)
(Conserved hypothetical protein.)
genome : 70,820,495 - 70,833,706 (13,212)
query : 1 - 898 (898/898)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 23, cyto 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021290)
HIX0021290
HIT000589882 (
ENST00000486110
)
(Conserved hypothetical protein.)
genome : 70,820,511 - 70,831,920 (11,410)
query : 1 - 473 (473/473)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 22, cyto 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021290)
HIX0159690
HIT000070534
(
AF126164
)
Representative transcript
(Conserved hypothetical protein.)
genome : 70,820,512 - 70,833,706 (13,195)
query : 4 - 834 (831/834)
4 exons
identity = 0.999
3'(1.000;1.000;1.000;0.998)5'
coverage = 0.996
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 19, cyto_nucl 7, nucl 6.5, cyto 4.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0159690)
HIX0021290
HIT000567868 (
ENST00000463058
)
(Conserved hypothetical protein.)
genome : 70,820,512 - 70,833,706 (13,195)
query : 1 - 832 (832/832)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 25, cyto 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021290)
HIX0021290
HIT000035121
(
BC010922
)
(HERV-H LTR-associating protein 3 isoform 3.)
genome : 70,820,519 - 70,833,704 (13,186)
query : 5 - 779 (775/809)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 0.992
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, cyto 7.5, cyto_nucl 7.5, nucl 6.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021290)
HIX0021290
HIT000352220 (
ENST00000370940
)
(Conserved hypothetical protein.)
genome : 70,820,519 - 70,833,704 (13,186)
query : 1 - 775 (775/775)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, cyto 7.5, cyto_nucl 7.5, nucl 6.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021290)
HIX0021290
HIT000631063 (
ENST00000531950
)
(Conserved hypothetical protein.)
genome : 70,820,527 - 70,851,022 (30,496)
query : 1 - 541 (541/541)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 23, cyto 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021290)
HIX0021290
HIT000624882 (
ENST00000525653
)
(Conserved hypothetical protein.)
genome : 70,820,538 - 70,833,406 (12,869)
query : 1 - 689 (689/689)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 26, nucl 3, cyto 3, cyto_nucl 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021290)
HIX0021290
HIT000530158 (
ENST00000432224
)
(Conserved hypothetical protein.)
genome : 70,820,635 - 70,833,703 (13,069)
query : 1 - 757 (757/757)
3 exons
identity = 0.997
5'(1.000;0.979;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 18, cyto 7.5, cyto_nucl 6, nucl 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021290)
HIX0021290
HIT000070533
(
AF126163
)
Representative transcript
(HERV-H LTR-associating protein 3 isoform 3.)
genome : 70,820,671 - 70,833,706 (13,036)
query : 1 - 720 (720/724)
3 exons
identity = 0.994
5'(0.986;1.000;0.998)3'
coverage = 0.994
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 12, cyto_nucl 11.5, nucl 11, cyto 8
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021290)
HIX0160293
HIT000511877 (
ENST00000413943
)
(Conserved hypothetical protein.)
genome : 70,825,245 - 70,826,120 (876)
query : 1 - 575 (575/575)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 15, extr 8, mito 5, cyto 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0160293)
HIX0000695
HIT000198833 (
NM_001902
)
(Cystathionine gamma-lyase; EC=4.4.1.1; Cysteine-protein sulfhydrase; Gamma-cystathionase;)
genome : 70,876,901 - 70,905,534 (28,634)
query : 1 - 2,140 (2,140/2,140)
12 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 4.4.1.1
KEGG pathway :
00260 : Glycine, serine and threonine metabolism (58)
00270 : Cysteine and methionine metabolism (61)
00450 : Selenocompound metabolism (17)
01100 : Metabolic pathways (1346)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18, cyto_nucl 12.5, nucl 5, E.R. 3, mito 2,
lyso 2, E.R._golg 2
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000695)
HIX0000695
HIT000214445 (
NM_153742
)
(Cystathionine gamma-lyase isoform 2.)
genome : 70,876,901 - 70,905,534 (28,634)
query : 1 - 2,008 (2,008/2,008)
11 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 4.4.1.1
KEGG pathway :
00260 : Glycine, serine and threonine metabolism (58)
00270 : Cysteine and methionine metabolism (61)
00450 : Selenocompound metabolism (17)
01100 : Metabolic pathways (1346)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22, cyto_nucl 14.5, nucl 5, mito 2
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000695)
HIX0000695
HIT000509920 (
ENST00000411986
)
(Cystathionine gamma-lyase; EC=4.4.1.1; Cysteine-protein sulfhydrase; Gamma-cystathionase;)
genome : 70,876,901 - 70,905,534 (28,634)
query : 1 - 2,044 (2,044/2,044)
11 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 4.4.1.1
KEGG pathway :
00260 : Glycine, serine and threonine metabolism (58)
00270 : Cysteine and methionine metabolism (61)
00450 : Selenocompound metabolism (17)
01100 : Metabolic pathways (1346)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17, cyto_nucl 11.5, mito 7, nucl 4, mito_pero 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000695)
HIX0000695
HIT000655632 (
NM_001190463
)
(Cystathionine gamma-lyase; EC=4.4.1.1; Cysteine-protein sulfhydrase; Gamma-cystathionase;)
genome : 70,876,901 - 70,905,534 (28,634)
query : 1 - 2,044 (2,044/2,044)
11 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 4.4.1.1
KEGG pathway :
00260 : Glycine, serine and threonine metabolism (58)
00270 : Cysteine and methionine metabolism (61)
00450 : Selenocompound metabolism (17)
01100 : Metabolic pathways (1346)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17, cyto_nucl 11.5, mito 7, nucl 4, mito_pero 4
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000695)
HIX0000695
HIT000429135
(
AK310269
)
(Cystathionine gamma-lyase; EC=4.4.1.1; Cysteine-protein sulfhydrase; Gamma-cystathionase;)
genome : 70,876,913 - 70,897,806 (20,894)
query : 1 - 1,009 (1,009/1,009)
9 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
EC number :
EC 4.4.1.1
KEGG pathway :
00260 : Glycine, serine and threonine metabolism (58)
00270 : Cysteine and methionine metabolism (61)
00450 : Selenocompound metabolism (17)
01100 : Metabolic pathways (1346)
InterPro :
IPR000277 : Cys/Met metabolism, pyridoxal phosphate-dependent enzyme
IPR015421 : Pyridoxal phosphate-dependent transferase, major region, subdomain 1
IPR015424 : Pyridoxal phosphate-dependent transferase
GO :
0003824 : Molecular Function : catalytic activity
0030170 : Molecular Function : pyridoxal phosphate binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19.5, cyto_nucl 14, mito 6, nucl 3.5,
mito_pero 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000695)
HIX0000695
HIT000498570
(
AK303946
)
(Cystathionine gamma-lyase; EC=4.4.1.1; Cysteine-protein sulfhydrase; Gamma-cystathionase;)
genome : 70,876,925 - 70,905,031 (28,107)
query : 2 - 1,518 (1,517/1,518)
11 exons
identity = 0.998
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.993;0.992)3'
coverage = 0.999
EC number :
EC 4.4.1.1
KEGG pathway :
00260 : Glycine, serine and threonine metabolism (58)
00270 : Cysteine and methionine metabolism (61)
00450 : Selenocompound metabolism (17)
01100 : Metabolic pathways (1346)
InterPro :
IPR000277 : Cys/Met metabolism, pyridoxal phosphate-dependent enzyme
IPR015421 : Pyridoxal phosphate-dependent transferase, major region, subdomain 1
IPR015422 : Pyridoxal phosphate-dependent transferase, major region, subdomain 2
IPR015424 : Pyridoxal phosphate-dependent transferase
GO :
0003824 : Molecular Function : catalytic activity
0030170 : Molecular Function : pyridoxal phosphate binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19, cyto_nucl 11.5, mito 6, nucl 2, lyso 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000695)
HIX0000695
HIT000331156
(
AK223376
)
(Cystathionine gamma-lyase; EC=4.4.1.1; Cysteine-protein sulfhydrase; Gamma-cystathionase;)
genome : 70,876,928 - 70,905,171 (28,244)
query : 1 - 1,751 (1,751/1,751)
12 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;0.995)3'
coverage = 1.000
EC number :
EC 4.4.1.1
KEGG pathway :
00260 : Glycine, serine and threonine metabolism (58)
00270 : Cysteine and methionine metabolism (61)
00450 : Selenocompound metabolism (17)
01100 : Metabolic pathways (1346)
InterPro :
IPR000277 : Cys/Met metabolism, pyridoxal phosphate-dependent enzyme
IPR015421 : Pyridoxal phosphate-dependent transferase, major region, subdomain 1
IPR015422 : Pyridoxal phosphate-dependent transferase, major region, subdomain 2
IPR015424 : Pyridoxal phosphate-dependent transferase
GO :
0003824 : Molecular Function : catalytic activity
0030170 : Molecular Function : pyridoxal phosphate binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18.5, cyto_nucl 13.5, nucl 5.5, E.R. 3, lyso 2,
E.R._mito 2, E.R._golg 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000695)
HIX0000695
HIT000037338
(
BC015807
)
Representative transcript
(Cystathionine gamma-lyase; EC=4.4.1.1; Cysteine-protein sulfhydrase; Gamma-cystathionase;)
genome : 70,876,955 - 70,905,253 (28,299)
query : 1 - 1,805 (1,805/1,819)
12 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 4.4.1.1
KEGG pathway :
00260 : Glycine, serine and threonine metabolism (58)
00270 : Cysteine and methionine metabolism (61)
00450 : Selenocompound metabolism (17)
01100 : Metabolic pathways (1346)
InterPro :
IPR000277 : Cys/Met metabolism, pyridoxal phosphate-dependent enzyme
IPR015421 : Pyridoxal phosphate-dependent transferase, major region, subdomain 1
IPR015422 : Pyridoxal phosphate-dependent transferase, major region, subdomain 2
IPR015424 : Pyridoxal phosphate-dependent transferase
GO :
0003824 : Molecular Function : catalytic activity
0030170 : Molecular Function : pyridoxal phosphate binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18, cyto_nucl 12.5, nucl 5, E.R. 3, mito 2,
lyso 2, E.R._golg 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000695)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AY083352
Danio
sp. (Zebrafish) : BC056538
Rattus
sp. (Rat) : BC078869
Danio
sp. (Zebrafish) : BC080251
Bos
sp. (Cow) : BC151523
Bos
sp. (Cow) : BT021485
Gallus
sp. (Chicken) : BX934198
Tetraodon
sp. (Tetraodon) : CR690254
Pongo
sp. (Orangutan) : CR857176
Equus
sp. (Horse) : ENSECAT00000016030
Oryzias
sp. (Medaka) : ENSORLT00000009745
Takifugu
sp. (Fugu) : SINFRUT00000171426
Monodelphis
sp. (Opossum) : XM_001379373
Pan
sp. (Chimpanzee) : XM_513486
Canis
sp. (Dog) : XM_537115
HIX0000695
HIT000352218 (
ENST00000370938
)
(Cystathionine gamma-lyase; EC=4.4.1.1; Cysteine-protein sulfhydrase; Gamma-cystathionase;)
genome : 70,876,955 - 70,905,253 (28,299)
query : 1 - 1,805 (1,805/1,805)
12 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 4.4.1.1
KEGG pathway :
00260 : Glycine, serine and threonine metabolism (58)
00270 : Cysteine and methionine metabolism (61)
00450 : Selenocompound metabolism (17)
01100 : Metabolic pathways (1346)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18, cyto_nucl 12.5, nucl 5, E.R. 3, mito 2,
lyso 2, E.R._golg 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000695)
HIX0000695
HIT000569645 (
ENST00000464926
)
(Cystathionine gamma-lyase isoform 3.)
genome : 70,876,955 - 70,896,077 (19,123)
query : 1 - 772 (772/772)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 4.4.1.1
KEGG pathway :
00260 : Glycine, serine and threonine metabolism (58)
00270 : Cysteine and methionine metabolism (61)
00450 : Selenocompound metabolism (17)
01100 : Metabolic pathways (1346)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 24, cyto_nucl 14, mito 3, nucl 2, lyso 2,
mito_pero 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000695)
HIX0000695
HIT000215694
(
S52028
)
(Cystathionine gamma-lyase; EC=4.4.1.1; Cysteine-protein sulfhydrase; Gamma-cystathionase;)
genome : 70,877,066 - 70,904,887 (27,822)
query : 1 - 1,194 (1,194/1,194)
11 exons
identity = 0.997
5'(0.995;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;0.981)3'
coverage = 1.000
EC number :
EC 4.4.1.1
KEGG pathway :
00260 : Glycine, serine and threonine metabolism (58)
00270 : Cysteine and methionine metabolism (61)
00450 : Selenocompound metabolism (17)
01100 : Metabolic pathways (1346)
InterPro :
IPR000277 : Cys/Met metabolism, pyridoxal phosphate-dependent enzyme
IPR015421 : Pyridoxal phosphate-dependent transferase, major region, subdomain 1
IPR015422 : Pyridoxal phosphate-dependent transferase, major region, subdomain 2
IPR015424 : Pyridoxal phosphate-dependent transferase
GO :
0003824 : Molecular Function : catalytic activity
0030170 : Molecular Function : pyridoxal phosphate binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 23, cyto_nucl 14, nucl 3, mito 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000695)
HIX0000695
HIT000215710
(
S52784
)
(Cystathionine gamma-lyase; EC=4.4.1.1; Cysteine-protein sulfhydrase; Gamma-cystathionase;)
genome : 70,877,066 - 70,904,887 (27,822)
query : 1 - 1,326 (1,326/1,326)
12 exons
identity = 0.998
5'(0.995;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;0.981)3'
coverage = 1.000
EC number :
EC 4.4.1.1
KEGG pathway :
00260 : Glycine, serine and threonine metabolism (58)
00270 : Cysteine and methionine metabolism (61)
00450 : Selenocompound metabolism (17)
01100 : Metabolic pathways (1346)
InterPro :
IPR000277 : Cys/Met metabolism, pyridoxal phosphate-dependent enzyme
IPR015421 : Pyridoxal phosphate-dependent transferase, major region, subdomain 1
IPR015422 : Pyridoxal phosphate-dependent transferase, major region, subdomain 2
IPR015424 : Pyridoxal phosphate-dependent transferase
GO :
0003824 : Molecular Function : catalytic activity
0030170 : Molecular Function : pyridoxal phosphate binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18.5, cyto_nucl 13.5, nucl 5.5, E.R. 3, lyso 2,
E.R._mito 2, E.R._golg 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000695)
HIX0000695
HIT000307357 (
ENST00000346806
)
(Cystathionine gamma-lyase; EC=4.4.1.1; Cysteine-protein sulfhydrase; Gamma-cystathionase;)
genome : 70,877,066 - 70,904,887 (27,822)
query : 1 - 1,196 (1,196/1,196)
11 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 4.4.1.1
KEGG pathway :
00260 : Glycine, serine and threonine metabolism (58)
00270 : Cysteine and methionine metabolism (61)
00450 : Selenocompound metabolism (17)
01100 : Metabolic pathways (1346)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22, cyto_nucl 14.5, nucl 5, mito 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000695)
HIX0000695
HIT000099802
(
BT006882
)
(Cystathionine gamma-lyase; EC=4.4.1.1; Cysteine-protein sulfhydrase; Gamma-cystathionase;)
genome : 70,877,099 - 70,904,810 (27,712)
query : 1 - 1,218 (1,218/1,218)
12 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 4.4.1.1
KEGG pathway :
00260 : Glycine, serine and threonine metabolism (58)
00270 : Cysteine and methionine metabolism (61)
00450 : Selenocompound metabolism (17)
01100 : Metabolic pathways (1346)
InterPro :
IPR000277 : Cys/Met metabolism, pyridoxal phosphate-dependent enzyme
IPR015421 : Pyridoxal phosphate-dependent transferase, major region, subdomain 1
IPR015422 : Pyridoxal phosphate-dependent transferase, major region, subdomain 2
IPR015424 : Pyridoxal phosphate-dependent transferase
GO :
0003824 : Molecular Function : catalytic activity
0030170 : Molecular Function : pyridoxal phosphate binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18, cyto_nucl 12.5, nucl 5, E.R. 3, mito 2,
lyso 2, E.R._golg 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000695)
HIX0000695
HIT000586318 (
ENST00000482383
)
(Cystathionine gamma-lyase; EC=4.4.1.1; Cysteine-protein sulfhydrase; Gamma-cystathionase;)
genome : 70,900,534 - 70,904,915 (4,382)
query : 1 - 598 (598/598)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 4.4.1.1
KEGG pathway :
00260 : Glycine, serine and threonine metabolism (58)
00270 : Cysteine and methionine metabolism (61)
00450 : Selenocompound metabolism (17)
01100 : Metabolic pathways (1346)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16.5, cyto_nucl 13.5, nucl 9.5, extr 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000695)
HIX0161513
HIT000554295 (
ENST00000456361
)
(Cysteine/histidine-rich domain containing protein.)
genome : 70,996,209 - 70,997,175 (967)
query : 1 - 967 (967/967)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 22, cyto 5, nucl 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0161513)
HIX0161220
HIT000543971 (
ENST00000446037
)
(Peptidase C14, caspase domain containing protein.)
genome : 71,126,340 - 71,126,948 (609)
query : 1 - 609 (609/609)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30.5, cyto_nucl 16.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0161220)
HIX0029317
HIT000096709
(
BC041441
)
Representative transcript
(Conserved hypothetical protein.)
genome : 71,172,136 - 71,252,150 (80,015)
query : 1 - 2,085 (2,085/2,153)
7 exons
identity = 0.998
5'(1.000;1.000;1.000;1.000;1.000;1.000;0.997)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 9.5, cyto 7, E.R._mito 6.5, extr 5, cyto_plas 5,
nucl 4, extr_plas 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029317)
HIX0029317
HIT000517384 (
ENST00000419450
)
(Hypothetical protein.)
genome : 71,172,136 - 71,252,151 (80,016)
query : 1 - 2,086 (2,086/2,086)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 9.5, cyto 7, E.R._mito 6.5, extr 5, cyto_plas 5,
nucl 4, extr_plas 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029317)
HIX0160542
HIT000521121 (
ENST00000423187
)
(Conserved hypothetical protein.)
genome : 71,181,616 - 71,185,972 (4,357)
query : 1 - 432 (432/432)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 24, nucl 2.5, mito 2, cyto_nucl 2, lyso 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0160542)
HIX0000696
HIT000319476 (
NM_198714
)
(Prostaglandin E2 receptor EP3 subtype; PGE receptor EP3 subtype; PGE2 receptor EP3 subtype; PGE2-R; Prostanoid EP3 receptor;)
genome : 71,318,036 - 71,513,491 (195,456)
query : 1 - 1,934 (1,934/1,936)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 0.999
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000696)
HIX0000696
HIT000319478 (
NM_198716
)
(Prostaglandin E2 receptor EP3 subtype isoform 6.)
genome : 71,318,036 - 71,513,491 (195,456)
query : 1 - 1,842 (1,842/1,844)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 0.999
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000696)
HIX0000696
HIT000319479 (
NM_198717
)
(Prostaglandin E2 receptor EP3 subtype isoform 7.)
genome : 71,318,036 - 71,513,491 (195,456)
query : 1 - 1,815 (1,815/1,817)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 0.999
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000696)
HIX0000696
HIT000324003
(
X83857
)
Representative transcript
(Prostaglandin E2 receptor EP3 subtype; PGE receptor EP3 subtype; PGE2 receptor EP3 subtype; PGE2-R; Prostanoid EP3 receptor;)
genome : 71,318,036 - 71,513,471 (195,436)
query : 1 - 1,909 (1,909/1,911)
5 exons
identity = 0.997
3'(0.998;1.000;1.000;1.000;0.996)5'
coverage = 0.999
InterPro :
IPR000265 : Prostanoid EP3 receptor
IPR001244 : Prostaglandin DP receptor
IPR001481 : Prostanoid EP3 receptor, type 2
IPR008365 : Prostanoid receptor
GO :
0004955 : Molecular Function : prostaglandin receptor activity
0004957 : Molecular Function : prostaglandin E receptor activity
0007186 : Biological Process : G-protein coupled receptor signaling pathway
0016021 : Cellular Component : integral component of membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000696)
Ortholog candidate ( ->
Evola
)
Bos
sp. (Cow) : BC107538
Mus
sp. (Mouse) : D10204
Macaca
sp. (Macaque) : DQ091281
Gallus
sp. (Chicken) : DQ468653
Danio
sp. (Zebrafish) : ENSDART00000085498
Equus
sp. (Horse) : ENSECAT00000014888
Monodelphis
sp. (Opossum) : ENSMODT00000003953
Oryzias
sp. (Medaka) : ENSORLT00000009974
Pongo
sp. (Orangutan) : ENSPPYT00000001492
Tetraodon
sp. (Tetraodon) : GSTENT00019856001
Takifugu
sp. (Fugu) : SINFRUT00000131256
Rattus
sp. (Rat) : X83855
Pan
sp. (Chimpanzee) : XM_513487
HIX0000696
HIT000324005
(
X83859
)
(Prostaglandin E2 receptor EP3 subtype isoform 7.)
genome : 71,318,036 - 71,513,471 (195,436)
query : 1 - 1,790 (1,790/1,792)
3 exons
identity = 0.997
3'(0.998;1.000;0.996)5'
coverage = 0.999
InterPro :
IPR000265 : Prostanoid EP3 receptor
IPR001244 : Prostaglandin DP receptor
IPR001481 : Prostanoid EP3 receptor, type 2
IPR008365 : Prostanoid receptor
GO :
0004955 : Molecular Function : prostaglandin receptor activity
0004957 : Molecular Function : prostaglandin E receptor activity
0007186 : Biological Process : G-protein coupled receptor signaling pathway
0016021 : Cellular Component : integral component of membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000696)
HIX0000696
HIT000324007
(
X83861
)
(Prostaglandin E2 receptor EP3 subtype isoform 6.)
genome : 71,318,036 - 71,513,471 (195,436)
query : 1 - 1,817 (1,817/1,819)
4 exons
identity = 0.997
3'(0.998;1.000;1.000;0.996)5'
coverage = 0.999
InterPro :
IPR000265 : Prostanoid EP3 receptor
IPR001244 : Prostaglandin DP receptor
IPR001481 : Prostanoid EP3 receptor, type 2
IPR008365 : Prostanoid receptor
GO :
0004955 : Molecular Function : prostaglandin receptor activity
0004957 : Molecular Function : prostaglandin E receptor activity
0007186 : Biological Process : G-protein coupled receptor signaling pathway
0016021 : Cellular Component : integral component of membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000696)
HIX0000696
HIT000308033 (
ENST00000351052
)
(Prostaglandin E2 receptor EP3 subtype isoform 7.)
genome : 71,318,036 - 71,513,491 (195,456)
query : 1 - 2,021 (2,021/2,021)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000696)
HIX0000696
HIT000352212 (
ENST00000370932
)
(Prostaglandin E2 receptor EP3 subtype isoform 7.)
genome : 71,318,036 - 71,513,491 (195,456)
query : 1 - 1,815 (1,815/1,815)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000696)
HIX0000696
HIT000657751 (
NR_028292
)
(Prostaglandin E2 receptor EP3 subtype isoform 7.)
genome : 71,318,036 - 71,513,491 (195,456)
query : 1 - 2,011 (2,011/2,011)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000696)
HIX0000696
HIT000657752 (
NR_028293
)
(Prostaglandin E2 receptor EP3 subtype; PGE receptor EP3 subtype; PGE2 receptor EP3 subtype; PGE2-R; Prostanoid EP3 receptor;)
genome : 71,318,036 - 71,513,491 (195,456)
query : 1 - 1,984 (1,984/1,984)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000696)
HIX0000696
HIT000657753 (
NR_028294
)
(Prostaglandin E2 receptor EP3 subtype isoform 6.)
genome : 71,318,036 - 71,513,491 (195,456)
query : 1 - 2,080 (2,080/2,080)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000696)
HIX0000696
HIT000352211 (
ENST00000370931
)
(Prostaglandin E2 receptor EP3 subtype; PGE receptor EP3 subtype; PGE2 receptor EP3 subtype; PGE2-R; Prostanoid EP3 receptor;)
genome : 71,318,036 - 71,513,471 (195,436)
query : 1 - 1,914 (1,914/1,914)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000696)
HIX0000696
HIT000101913
(
D86097
)
(Prostaglandin E2 receptor EP3 subtype isoform 6.)
genome : 71,318,125 - 71,513,491 (195,367)
query : 1 - 1,922 (1,922/1,922)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR000265 : Prostanoid EP3 receptor
IPR001244 : Prostaglandin DP receptor
IPR001481 : Prostanoid EP3 receptor, type 2
IPR008365 : Prostanoid receptor
GO :
0004955 : Molecular Function : prostaglandin receptor activity
0004957 : Molecular Function : prostaglandin E receptor activity
0007186 : Biological Process : G-protein coupled receptor signaling pathway
0016021 : Cellular Component : integral component of membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000696)
HIX0000696
HIT000101914
(
D86098
)
(Prostaglandin E2 receptor EP3 subtype; PGE receptor EP3 subtype; PGE2 receptor EP3 subtype; PGE2-R; Prostanoid EP3 receptor;)
genome : 71,318,125 - 71,513,491 (195,367)
query : 1 - 1,895 (1,895/1,895)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR000265 : Prostanoid EP3 receptor
IPR001244 : Prostaglandin DP receptor
IPR001481 : Prostanoid EP3 receptor, type 2
IPR008365 : Prostanoid receptor
GO :
0004955 : Molecular Function : prostaglandin receptor activity
0004957 : Molecular Function : prostaglandin E receptor activity
0007186 : Biological Process : G-protein coupled receptor signaling pathway
0016021 : Cellular Component : integral component of membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000696)
HIX0000696
HIT000314479 (
ENST00000361210
)
(Prostaglandin E2 receptor EP3 subtype isoform 7.)
genome : 71,318,125 - 71,513,491 (195,367)
query : 1 - 1,922 (1,922/1,922)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000696)
HIX0000696
HIT000583422 (
ENST00000479353
)
(Prostaglandin E2 receptor EP3 subtype; PGE receptor EP3 subtype; PGE2 receptor EP3 subtype; PGE2-R; Prostanoid EP3 receptor;)
genome : 71,318,125 - 71,513,491 (195,367)
query : 1 - 1,895 (1,895/1,895)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000696)
HIX0000696
HIT000324009
(
X83863
)
(Prostaglandin E2 receptor EP3 subtype isoform 6.)
genome : 71,318,125 - 71,513,471 (195,347)
query : 1 - 1,967 (1,967/1,967)
6 exons
identity = 0.997
3'(1.000;1.000;0.993;1.000;1.000;0.996)5'
coverage = 1.000
InterPro :
IPR000265 : Prostanoid EP3 receptor
IPR001244 : Prostaglandin DP receptor
IPR001481 : Prostanoid EP3 receptor, type 2
IPR008365 : Prostanoid receptor
GO :
0004955 : Molecular Function : prostaglandin receptor activity
0004957 : Molecular Function : prostaglandin E receptor activity
0007186 : Biological Process : G-protein coupled receptor signaling pathway
0016021 : Cellular Component : integral component of membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000696)
HIX0000696
HIT000600439 (
ENST00000497146
)
(Prostaglandin E2 receptor EP3 subtype isoform 6.)
genome : 71,318,125 - 71,513,471 (195,347)
query : 1 - 1,971 (1,971/1,971)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000696)
HIX0000696
HIT000218128
(
U13214
)
(Prostaglandin E2 receptor EP3 subtype isoform 6.)
genome : 71,318,256 - 71,513,316 (195,061)
query : 1 - 1,447 (1,447/1,456)
4 exons
identity = 0.997
3'(0.997;1.000;1.000;0.997)5'
coverage = 0.994
InterPro :
IPR000265 : Prostanoid EP3 receptor
IPR001244 : Prostaglandin DP receptor
IPR001481 : Prostanoid EP3 receptor, type 2
IPR008365 : Prostanoid receptor
GO :
0004955 : Molecular Function : prostaglandin receptor activity
0004957 : Molecular Function : prostaglandin E receptor activity
0007186 : Biological Process : G-protein coupled receptor signaling pathway
0016021 : Cellular Component : integral component of membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000696)
HIX0000696
HIT000218129
(
U13215
)
(Prostaglandin E2 receptor EP3 subtype isoform 7.)
genome : 71,318,256 - 71,513,316 (195,061)
query : 1 - 1,420 (1,420/1,429)
3 exons
identity = 0.997
3'(0.997;1.000;0.997)5'
coverage = 0.994
InterPro :
IPR000265 : Prostanoid EP3 receptor
IPR001244 : Prostaglandin DP receptor
IPR001481 : Prostanoid EP3 receptor, type 2
IPR008365 : Prostanoid receptor
GO :
0004955 : Molecular Function : prostaglandin receptor activity
0004957 : Molecular Function : prostaglandin E receptor activity
0007186 : Biological Process : G-protein coupled receptor signaling pathway
0016021 : Cellular Component : integral component of membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000696)
HIX0000696
HIT000565261 (
ENST00000460330
)
(Prostaglandin E2 receptor EP3 subtype isoform 6.)
genome : 71,318,256 - 71,513,316 (195,061)
query : 1 - 1,447 (1,447/1,447)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000696)
HIX0000696
HIT000039779
(
BC024229
)
(Prostaglandin E2 receptor EP3 subtype isoform 6.)
genome : 71,318,307 - 71,513,497 (195,191)
query : 5 - 1,581 (1,577/1,611)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 0.997
InterPro :
IPR000265 : Prostanoid EP3 receptor
IPR001244 : Prostaglandin DP receptor
IPR001481 : Prostanoid EP3 receptor, type 2
IPR008365 : Prostanoid receptor
GO :
0004955 : Molecular Function : prostaglandin receptor activity
0004957 : Molecular Function : prostaglandin E receptor activity
0007186 : Biological Process : G-protein coupled receptor signaling pathway
0016021 : Cellular Component : integral component of membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000696)
HIX0000696
HIT000101429
(
D38298
)
(Prostaglandin E2 receptor EP3 subtype; PGE receptor EP3 subtype; PGE2 receptor EP3 subtype; PGE2-R; Prostanoid EP3 receptor;)
genome : 71,318,357 - 71,513,491 (195,135)
query : 1 - 1,613 (1,613/1,613)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR000265 : Prostanoid EP3 receptor
IPR001244 : Prostaglandin DP receptor
IPR001481 : Prostanoid EP3 receptor, type 2
IPR008365 : Prostanoid receptor
GO :
0004955 : Molecular Function : prostaglandin receptor activity
0004957 : Molecular Function : prostaglandin E receptor activity
0007186 : Biological Process : G-protein coupled receptor signaling pathway
0016021 : Cellular Component : integral component of membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000696)
HIX0000696
HIT000101432
(
D38301
)
(Prostaglandin E2 receptor EP3 subtype isoform 7.)
genome : 71,318,417 - 71,513,491 (195,075)
query : 1 - 1,434 (1,434/1,434)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR000265 : Prostanoid EP3 receptor
IPR001244 : Prostaglandin DP receptor
IPR001481 : Prostanoid EP3 receptor, type 2
IPR008365 : Prostanoid receptor
GO :
0004955 : Molecular Function : prostaglandin receptor activity
0004957 : Molecular Function : prostaglandin E receptor activity
0007186 : Biological Process : G-protein coupled receptor signaling pathway
0016021 : Cellular Component : integral component of membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000696)
HIX0000696
HIT000216310
(
S69326
)
(Prostaglandin E2 receptor EP3 subtype; PGE receptor EP3 subtype; PGE2 receptor EP3 subtype; PGE2-R; Prostanoid EP3 receptor;)
genome : 71,318,466 - 71,513,455 (194,990)
query : 3 - 1,470 (1,468/1,488)
5 exons
identity = 0.997
3'(0.987;1.000;1.000;1.000;0.996)5'
coverage = 0.999
InterPro :
IPR000265 : Prostanoid EP3 receptor
IPR001244 : Prostaglandin DP receptor
IPR001481 : Prostanoid EP3 receptor, type 2
IPR008365 : Prostanoid receptor
GO :
0004955 : Molecular Function : prostaglandin receptor activity
0004957 : Molecular Function : prostaglandin E receptor activity
0007186 : Biological Process : G-protein coupled receptor signaling pathway
0016021 : Cellular Component : integral component of membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000696)
HIX0000696
HIT000101431
(
D38300
)
(Prostaglandin E2 receptor EP3 subtype isoform 6.)
genome : 71,318,453 - 71,513,491 (195,039)
query : 1 - 1,425 (1,425/1,425)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR000265 : Prostanoid EP3 receptor
IPR001244 : Prostaglandin DP receptor
IPR001481 : Prostanoid EP3 receptor, type 2
IPR008365 : Prostanoid receptor
GO :
0004955 : Molecular Function : prostaglandin receptor activity
0004957 : Molecular Function : prostaglandin E receptor activity
0007186 : Biological Process : G-protein coupled receptor signaling pathway
0016021 : Cellular Component : integral component of membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000696)
HIX0000696
HIT000192721
(
L27489
)
(Prostaglandin E2 receptor EP3 subtype isoform 7.)
genome : 71,318,458 - 71,513,477 (195,020)
query : 1 - 1,379 (1,379/1,379)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR000265 : Prostanoid EP3 receptor
IPR001244 : Prostaglandin DP receptor
IPR001481 : Prostanoid EP3 receptor, type 2
IPR008365 : Prostanoid receptor
GO :
0004955 : Molecular Function : prostaglandin receptor activity
0004957 : Molecular Function : prostaglandin E receptor activity
0007186 : Biological Process : G-protein coupled receptor signaling pathway
0016021 : Cellular Component : integral component of membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000696)
HIX0000696
HIT000216263
(
S68875
)
(Non-protein coding transcript.)
genome : 71,318,458 - 71,318,542 (85)
query : 1 - 85 (85/85)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000696)
HIX0000696
HIT000423431
(
AK290634
)
(Prostaglandin E2 receptor EP3 subtype; PGE receptor EP3 subtype; PGE2 receptor EP3 subtype; PGE2-R; Prostanoid EP3 receptor;)
genome : 71,318,473 - 71,513,350 (194,878)
query : 8 - 1,363 (1,356/1,363)
5 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;0.999)5'
coverage = 0.995
InterPro :
IPR000265 : Prostanoid EP3 receptor
IPR001244 : Prostaglandin DP receptor
IPR001481 : Prostanoid EP3 receptor, type 2
IPR008365 : Prostanoid receptor
GO :
0004955 : Molecular Function : prostaglandin receptor activity
0004957 : Molecular Function : prostaglandin E receptor activity
0007186 : Biological Process : G-protein coupled receptor signaling pathway
0016021 : Cellular Component : integral component of membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000696)
HIX0000696
HIT000254596
(
AY429108
)
(Prostaglandin E2 receptor EP3 subtype; PGE receptor EP3 subtype; PGE2 receptor EP3 subtype; PGE2-R; Prostanoid EP3 receptor;)
genome : 71,328,052 - 71,513,260 (185,209)
query : 1 - 1,182 (1,182/1,182)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR000265 : Prostanoid EP3 receptor
IPR001244 : Prostaglandin DP receptor
IPR001481 : Prostanoid EP3 receptor, type 2
IPR008365 : Prostanoid receptor
GO :
0004955 : Molecular Function : prostaglandin receptor activity
0004957 : Molecular Function : prostaglandin E receptor activity
0007186 : Biological Process : G-protein coupled receptor signaling pathway
0016021 : Cellular Component : integral component of membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000696)
HIX0000696
HIT000218130
(
U13216
)
(Prostaglandin E2 receptor EP3 subtype; PGE receptor EP3 subtype; PGE2 receptor EP3 subtype; PGE2-R; Prostanoid EP3 receptor;)
genome : 71,349,401 - 71,513,316 (163,916)
query : 1 - 1,643 (1,643/1,652)
6 exons
identity = 0.996
3'(0.988;1.000;1.000;1.000;1.000;0.997)5'
coverage = 0.995
InterPro :
IPR000265 : Prostanoid EP3 receptor
IPR001244 : Prostaglandin DP receptor
IPR001481 : Prostanoid EP3 receptor, type 2
IPR008365 : Prostanoid receptor
GO :
0004955 : Molecular Function : prostaglandin receptor activity
0004957 : Molecular Function : prostaglandin E receptor activity
0007186 : Biological Process : G-protein coupled receptor signaling pathway
0016021 : Cellular Component : integral component of membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000696)
HIX0000696
HIT000308875 (
ENST00000354608
)
(Prostaglandin E2 receptor EP3 subtype isoform 7.)
genome : 71,349,439 - 71,513,281 (163,843)
query : 1 - 1,504 (1,504/1,504)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000696)
HIX0000696
HIT000387860
(
BC118578
)
(Prostaglandin E2 receptor EP3 subtype isoform 7.)
genome : 71,349,439 - 71,513,281 (163,843)
query : 1 - 1,504 (1,504/1,504)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR000265 : Prostanoid EP3 receptor
IPR001244 : Prostaglandin DP receptor
IPR001481 : Prostanoid EP3 receptor, type 2
IPR008365 : Prostanoid receptor
GO :
0004955 : Molecular Function : prostaglandin receptor activity
0004957 : Molecular Function : prostaglandin E receptor activity
0007186 : Biological Process : G-protein coupled receptor signaling pathway
0016021 : Cellular Component : integral component of membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000696)
HIX0000696
HIT000387908
(
BC118659
)
(Prostaglandin E2 receptor EP3 subtype isoform 7.)
genome : 71,349,439 - 71,513,281 (163,843)
query : 1 - 1,453 (1,453/1,453)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR000265 : Prostanoid EP3 receptor
IPR001244 : Prostaglandin DP receptor
IPR001481 : Prostanoid EP3 receptor, type 2
IPR008365 : Prostanoid receptor
GO :
0004955 : Molecular Function : prostaglandin receptor activity
0004957 : Molecular Function : prostaglandin E receptor activity
0007186 : Biological Process : G-protein coupled receptor signaling pathway
0016021 : Cellular Component : integral component of membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000696)
HIX0160656
HIT000524709 (
ENST00000426775
)
(Conserved hypothetical protein.)
genome : 71,413,062 - 71,417,176 (4,115)
query : 1 - 749 (749/749)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 18, cyto 9.5, cyto_nucl 7, nucl 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0160656)
HIX0000696
HIT000319480 (
NM_198718
)
(Prostaglandin E2 receptor EP3 subtype isoform 8.)
genome : 71,418,115 - 71,513,491 (95,377)
query : 1 - 1,963 (1,963/1,963)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000696)
HIX0000696
HIT000486122 (
NM_001126044
)
(Prostaglandin E2 receptor EP3 subtype; PGE receptor EP3 subtype; PGE2 receptor EP3 subtype; PGE2-R; Prostanoid EP3 receptor;)
genome : 71,418,115 - 71,513,491 (95,377)
query : 1 - 2,055 (2,055/2,055)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000696)
HIX0000696
HIT000512753 (
ENST00000414819
)
(Prostaglandin E2 receptor EP3 subtype; PGE receptor EP3 subtype; PGE2 receptor EP3 subtype; PGE2-R; Prostanoid EP3 receptor;)
genome : 71,418,115 - 71,513,491 (95,377)
query : 1 - 2,055 (2,055/2,055)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000696)
HIX0000696
HIT000310568 (
ENST00000356595
)
(Prostaglandin E2 receptor EP3 subtype isoform 8.)
genome : 71,418,115 - 71,513,471 (95,357)
query : 1 - 1,943 (1,943/1,943)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000696)
HIX0000696
HIT000324008
(
X83862
)
(Prostaglandin E2 receptor EP3 subtype isoform 8.)
genome : 71,418,115 - 71,513,471 (95,357)
query : 1 - 1,940 (1,940/1,940)
4 exons
identity = 0.996
3'(0.995;1.000;1.000;0.996)5'
coverage = 1.000
InterPro :
IPR000265 : Prostanoid EP3 receptor
IPR001244 : Prostaglandin DP receptor
IPR001481 : Prostanoid EP3 receptor, type 2
IPR008365 : Prostanoid receptor
GO :
0004955 : Molecular Function : prostaglandin receptor activity
0004957 : Molecular Function : prostaglandin E receptor activity
0007186 : Biological Process : G-protein coupled receptor signaling pathway
0016021 : Cellular Component : integral component of membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000696)
HIX0000696
HIT000468848
(
EF534325
)
(Prostaglandin E2 receptor EP3 subtype; PGE receptor EP3 subtype; PGE2 receptor EP3 subtype; PGE2-R; Prostanoid EP3 receptor;)
genome : 71,418,631 - 71,512,415 (93,785)
query : 1 - 463 (463/463)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR000265 : Prostanoid EP3 receptor
IPR008365 : Prostanoid receptor
GO :
0004957 : Molecular Function : prostaglandin E receptor activity
0007186 : Biological Process : G-protein coupled receptor signaling pathway
0016021 : Cellular Component : integral component of membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 24, pero 3, plas 2, cyto 2, cyto_plas 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000696)
HIX0000696
HIT000319481 (
NM_198719
)
(Prostaglandin E2 receptor EP3 subtype; PGE receptor EP3 subtype; PGE2 receptor EP3 subtype; PGE2-R; Prostanoid EP3 receptor;)
genome : 71,436,464 - 71,513,491 (77,028)
query : 1 - 2,353 (2,353/2,353)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000696)
HIX0000696
HIT000117413 (
ENST00000306666
)
(Prostaglandin E2 receptor EP3 subtype; PGE receptor EP3 subtype; PGE2 receptor EP3 subtype; PGE2-R; Prostanoid EP3 receptor;)
genome : 71,436,464 - 71,513,471 (77,008)
query : 1 - 2,333 (2,333/2,333)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000696)
HIX0000696
HIT000324004
(
X83858
)
(Prostaglandin E2 receptor EP3 subtype; PGE receptor EP3 subtype; PGE2 receptor EP3 subtype; PGE2-R; Prostanoid EP3 receptor;)
genome : 71,436,469 - 71,513,471 (77,003)
query : 1 - 2,344 (2,344/2,344)
4 exons
identity = 0.984
3'(0.965;1.000;1.000;0.996)5'
coverage = 1.000
InterPro :
IPR000265 : Prostanoid EP3 receptor
IPR001244 : Prostaglandin DP receptor
IPR001481 : Prostanoid EP3 receptor, type 2
IPR008365 : Prostanoid receptor
GO :
0004955 : Molecular Function : prostaglandin receptor activity
0004957 : Molecular Function : prostaglandin E receptor activity
0007186 : Biological Process : G-protein coupled receptor signaling pathway
0016021 : Cellular Component : integral component of membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000696)
HIX0000696
HIT000192722
(
L27490
)
(Prostaglandin E2 receptor EP3 subtype; PGE receptor EP3 subtype; PGE2 receptor EP3 subtype; PGE2-R; Prostanoid EP3 receptor;)
genome : 71,436,910 - 71,513,455 (76,546)
query : 1 - 1,869 (1,869/1,870)
4 exons
identity = 0.999
3'(0.996;1.000;1.000;1.000)5'
coverage = 0.999
InterPro :
IPR000265 : Prostanoid EP3 receptor
IPR001244 : Prostaglandin DP receptor
IPR001481 : Prostanoid EP3 receptor, type 2
IPR008365 : Prostanoid receptor
GO :
0004955 : Molecular Function : prostaglandin receptor activity
0004957 : Molecular Function : prostaglandin E receptor activity
0007186 : Biological Process : G-protein coupled receptor signaling pathway
0016021 : Cellular Component : integral component of membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000696)
HIX0000696
HIT000216262
(
S68874
)
(Hypothetical short protein.)
genome : 71,436,910 - 71,440,071 (3,162)
query : 1 - 597 (597/598)
2 exons
identity = 0.997
3'(0.996;1.000)5'
coverage = 0.998
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 27, cyto 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000696)
HIX0000696
HIT000218132
(
U13218
)
(Prostaglandin E2 receptor EP3 subtype; PGE receptor EP3 subtype; PGE2 receptor EP3 subtype; PGE2-R; Prostanoid EP3 receptor;)
genome : 71,436,910 - 71,513,316 (76,407)
query : 1 - 1,729 (1,729/1,729)
4 exons
identity = 0.995
3'(0.990;1.000;1.000;0.997)5'
coverage = 1.000
InterPro :
IPR000265 : Prostanoid EP3 receptor
IPR001244 : Prostaglandin DP receptor
IPR001481 : Prostanoid EP3 receptor, type 2
IPR008365 : Prostanoid receptor
GO :
0004955 : Molecular Function : prostaglandin receptor activity
0004957 : Molecular Function : prostaglandin E receptor activity
0007186 : Biological Process : G-protein coupled receptor signaling pathway
0016021 : Cellular Component : integral component of membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000696)
HIX0000696
HIT000101428
(
D38297
)
(Prostaglandin E2 receptor EP3 subtype; PGE receptor EP3 subtype; PGE2 receptor EP3 subtype; PGE2-R; Prostanoid EP3 receptor;)
genome : 71,436,924 - 71,513,491 (76,568)
query : 1 - 1,891 (1,891/1,891)
4 exons
identity = 0.999
3'(0.996;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR000265 : Prostanoid EP3 receptor
IPR001244 : Prostaglandin DP receptor
IPR001481 : Prostanoid EP3 receptor, type 2
IPR008365 : Prostanoid receptor
GO :
0004955 : Molecular Function : prostaglandin receptor activity
0004957 : Molecular Function : prostaglandin E receptor activity
0007186 : Biological Process : G-protein coupled receptor signaling pathway
0016021 : Cellular Component : integral component of membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000696)
HIX0000696
HIT000434691
(
AK315825
)
(Prostaglandin E2 receptor EP3 subtype; PGE receptor EP3 subtype; PGE2 receptor EP3 subtype; PGE2-R; Prostanoid EP3 receptor;)
genome : 71,437,023 - 71,513,419 (76,397)
query : 1 - 1,722 (1,722/1,722)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR000265 : Prostanoid EP3 receptor
IPR001244 : Prostaglandin DP receptor
IPR001481 : Prostanoid EP3 receptor, type 2
IPR008365 : Prostanoid receptor
GO :
0004955 : Molecular Function : prostaglandin receptor activity
0004957 : Molecular Function : prostaglandin E receptor activity
0007186 : Biological Process : G-protein coupled receptor signaling pathway
0016021 : Cellular Component : integral component of membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000696)
HIX0000696
HIT000192709
(
L26976
)
(Prostaglandin E2 receptor EP3 subtype; PGE receptor EP3 subtype; PGE2 receptor EP3 subtype; PGE2-R; Prostanoid EP3 receptor;)
genome : 71,437,207 - 71,513,386 (76,180)
query : 16 - 1,515 (1,500/1,515)
4 exons
identity = 0.993
3'(0.981;1.000;1.000;0.994)5'
coverage = 0.990
InterPro :
IPR000265 : Prostanoid EP3 receptor
IPR001244 : Prostaglandin DP receptor
IPR001481 : Prostanoid EP3 receptor, type 2
IPR008365 : Prostanoid receptor
GO :
0004955 : Molecular Function : prostaglandin receptor activity
0004957 : Molecular Function : prostaglandin E receptor activity
0007186 : Biological Process : G-protein coupled receptor signaling pathway
0016021 : Cellular Component : integral component of membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000696)
HIX0000696
pHIT000097964 ( pHIT000097964 )
(Prostaglandin E2 receptor EP3 subtype; PGE receptor EP3 subtype; PGE2 receptor EP3 subtype; PGE2-R; Prostanoid EP3 receptor;)
genome : 71,457,295 - 71,513,260 (55,966)
query : 1 - 1,500 (1,500/1,500)
5 exons
InterPro :
IPR000265 : Prostanoid EP3 receptor
IPR001244 : Prostaglandin DP receptor
IPR001481 : Prostanoid EP3 receptor, type 2
IPR008365 : Prostanoid receptor
GO :
0004955 : Molecular Function : prostaglandin receptor activity
0004957 : Molecular Function : prostaglandin E receptor activity
0007186 : Biological Process : G-protein coupled receptor signaling pathway
0016021 : Cellular Component : integral component of membrane
SOSUI :
MEMBRANE PROTEIN
JIGSAW prediction
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000696)
CAGE tag :
T01R043FBD47
HIX0000696
pHIT000072155 ( pHIT000072155 )
(Prostaglandin E2 receptor EP3 subtype; PGE receptor EP3 subtype; PGE2 receptor EP3 subtype; PGE2-R; Prostanoid EP3 receptor;)
genome : 71,460,558 - 71,513,260 (52,703)
query : 1 - 1,116 (1,116/1,116)
3 exons
InterPro :
IPR000265 : Prostanoid EP3 receptor
IPR001244 : Prostaglandin DP receptor
IPR001481 : Prostanoid EP3 receptor, type 2
IPR008365 : Prostanoid receptor
GO :
0004955 : Molecular Function : prostaglandin receptor activity
0004957 : Molecular Function : prostaglandin E receptor activity
0007186 : Biological Process : G-protein coupled receptor signaling pathway
0016021 : Cellular Component : integral component of membrane
SOSUI :
MEMBRANE PROTEIN
JIGSAW prediction
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000696)
CAGE tag :
H08BA24B0103
HIX0000696
HIT000319477 (
NM_198715
)
(Prostaglandin E2 receptor EP3 subtype isoform 5.)
genome : 71,471,537 - 71,513,491 (41,955)
query : 1 - 7,759 (7,759/7,759)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000696)
HIX0000696
HIT000714338 (
ENST00000602605
)
(Conserved hypothetical protein.)
genome : 71,471,537 - 71,472,185 (649)
query : 1 - 649 (649/649)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000696)
HIX0000696
HIT000352204 (
ENST00000370924
)
(Prostaglandin E2 receptor EP3 subtype isoform 5.)
genome : 71,472,314 - 71,513,491 (41,178)
query : 1 - 6,982 (6,982/6,982)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000696)
HIX0000696
HIT000024101
(
AL050227
)
(Hypothetical short protein.)
genome : 71,472,544 - 71,473,814 (1,271)
query : 1 - 1,270 (1,270/1,284)
1 exon
identity = 0.999
3'(0.999)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16.5, extr_plas 13.5, plas 9.5, pero 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000696)
HIX0000696
HIT000324006
(
X83860
)
(Prostaglandin E2 receptor EP3 subtype isoform 5.)
genome : 71,474,694 - 71,513,471 (38,778)
query : 1 - 4,575 (4,575/4,575)
2 exons
identity = 0.995
3'(0.994;0.996)5'
coverage = 1.000
InterPro :
IPR000265 : Prostanoid EP3 receptor
IPR001244 : Prostaglandin DP receptor
IPR001481 : Prostanoid EP3 receptor, type 2
IPR008365 : Prostanoid receptor
GO :
0004955 : Molecular Function : prostaglandin receptor activity
0004957 : Molecular Function : prostaglandin E receptor activity
0007186 : Biological Process : G-protein coupled receptor signaling pathway
0016021 : Cellular Component : integral component of membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000696)
HIX0000696
HIT000218131
(
U13217
)
(Prostaglandin E2 receptor EP3 subtype isoform 5.)
genome : 71,477,578 - 71,513,316 (35,739)
query : 1 - 1,538 (1,538/1,540)
2 exons
identity = 0.992
3'(0.985;0.997)5'
coverage = 0.999
InterPro :
IPR000265 : Prostanoid EP3 receptor
IPR001244 : Prostaglandin DP receptor
IPR001481 : Prostanoid EP3 receptor, type 2
IPR008365 : Prostanoid receptor
GO :
0004955 : Molecular Function : prostaglandin receptor activity
0004957 : Molecular Function : prostaglandin E receptor activity
0007186 : Biological Process : G-protein coupled receptor signaling pathway
0016021 : Cellular Component : integral component of membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000696)
HIX0000696
HIT000192720
(
L27488
)
(Prostaglandin E2 receptor EP3 subtype isoform 5.)
genome : 71,477,600 - 71,513,477 (35,878)
query : 1 - 1,682 (1,682/1,682)
2 exons
identity = 0.999
3'(0.996;1.000)5'
coverage = 1.000
InterPro :
IPR000265 : Prostanoid EP3 receptor
IPR001244 : Prostaglandin DP receptor
IPR001481 : Prostanoid EP3 receptor, type 2
IPR008365 : Prostanoid receptor
GO :
0004955 : Molecular Function : prostaglandin receptor activity
0004957 : Molecular Function : prostaglandin E receptor activity
0007186 : Biological Process : G-protein coupled receptor signaling pathway
0016021 : Cellular Component : integral component of membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000696)
HIX0000696
HIT000216295
(
S69200
)
(Prostaglandin E2 receptor EP3 subtype isoform 5.)
genome : 71,477,600 - 71,513,477 (35,878)
query : 1 - 1,682 (1,682/1,682)
2 exons
identity = 0.999
3'(0.996;1.000)5'
coverage = 1.000
InterPro :
IPR000265 : Prostanoid EP3 receptor
IPR001244 : Prostaglandin DP receptor
IPR001481 : Prostanoid EP3 receptor, type 2
IPR008365 : Prostanoid receptor
GO :
0004955 : Molecular Function : prostaglandin receptor activity
0004957 : Molecular Function : prostaglandin E receptor activity
0007186 : Biological Process : G-protein coupled receptor signaling pathway
0016021 : Cellular Component : integral component of membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000696)
HIX0000696
HIT000101430
(
D38299
)
(Prostaglandin E2 receptor EP3 subtype isoform 5.)
genome : 71,477,632 - 71,513,491 (35,860)
query : 1 - 1,664 (1,664/1,664)
2 exons
identity = 0.999
3'(0.998;1.000)5'
coverage = 1.000
InterPro :
IPR000265 : Prostanoid EP3 receptor
IPR001244 : Prostaglandin DP receptor
IPR001481 : Prostanoid EP3 receptor, type 2
IPR008365 : Prostanoid receptor
GO :
0004955 : Molecular Function : prostaglandin receptor activity
0004957 : Molecular Function : prostaglandin E receptor activity
0007186 : Biological Process : G-protein coupled receptor signaling pathway
0016021 : Cellular Component : integral component of membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000696)
HIX0000696
HIT000193053
(
L32660
)
(Hypothetical short protein.)
genome : 71,477,898 - 71,477,987 (90)
query : 1 - 90 (90/90)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000696)
HIX0000696
HIT000253450
(
AY387856
)
(Prostaglandin E2 receptor EP3 subtype; PGE receptor EP3 subtype; PGE2 receptor EP3 subtype; PGE2-R; Prostanoid EP3 receptor;)
genome : 71,477,966 - 71,513,260 (35,295)
query : 1 - 1,099 (1,099/1,101)
2 exons
identity = 0.992
3'(0.966;0.998)5'
coverage = 0.998
InterPro :
IPR000265 : Prostanoid EP3 receptor
IPR001244 : Prostaglandin DP receptor
IPR001481 : Prostanoid EP3 receptor, type 2
IPR008365 : Prostanoid receptor
GO :
0004955 : Molecular Function : prostaglandin receptor activity
0004957 : Molecular Function : prostaglandin E receptor activity
0007186 : Biological Process : G-protein coupled receptor signaling pathway
0016021 : Cellular Component : integral component of membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000696)
HIX0000696
HIT000487694
(
AB451481
)
(Prostaglandin E2 receptor EP3 subtype isoform 7.)
genome : 71,477,981 - 71,513,260 (35,280)
query : 1 - 1,083 (1,083/1,095)
2 exons
identity = 0.997
3'(0.984;1.000)5'
coverage = 0.989
InterPro :
IPR000265 : Prostanoid EP3 receptor
IPR001244 : Prostaglandin DP receptor
IPR001481 : Prostanoid EP3 receptor, type 2
IPR008365 : Prostanoid receptor
GO :
0004955 : Molecular Function : prostaglandin receptor activity
0004957 : Molecular Function : prostaglandin E receptor activity
0007186 : Biological Process : G-protein coupled receptor signaling pathway
0016021 : Cellular Component : integral component of membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000696)
HIX0029392
HIT000264073
(
BC070115
)
Representative transcript
(Prostaglandin E2 receptor EP3 subtype; PGE receptor EP3 subtype; PGE2 receptor EP3 subtype; PGE2-R; Prostanoid EP3 receptor;)
genome : 71,512,189 - 71,532,864 (20,676)
query : 1 - 1,675 (1,675/1,689)
3 exons
identity = 0.998
5'(0.998;1.000;0.998)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 12.5, cyto_nucl 11.5, nucl 7.5, extr 6, mito 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029392)
HIX0029392
HIT000660352 (
NR_038420
)
(Prostaglandin E2 receptor EP3 subtype; PGE receptor EP3 subtype; PGE2 receptor EP3 subtype; PGE2-R; Prostanoid EP3 receptor;)
genome : 71,512,189 - 71,532,867 (20,679)
query : 1 - 1,678 (1,678/1,678)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14.5, cyto_nucl 14, nucl 10.5, mito 4
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029392)
HIX0029392
HIT000548395 (
ENST00000450461
)
(Conserved hypothetical protein.)
genome : 71,514,538 - 71,532,867 (18,330)
query : 1 - 553 (553/553)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, cyto 7, nucl 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029392)
HIX0029392
HIT000524933 (
ENST00000426999
)
(Conserved hypothetical protein.)
genome : 71,524,006 - 71,532,641 (8,636)
query : 1 - 607 (607/607)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18.5, cyto_nucl 12.5, extr 8, nucl 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029392)
HIX0199826
HIT000267093
(
BX538141
)
(Conserved hypothetical protein.)
genome : 71,528,982 - 71,533,196 (4,215)
query : 1 - 3,675 (3,675/3,734)
2 exons
identity = 0.999
3'(0.999;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15.5, extr 14, cyto_nucl 8.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199826)
HIX0199826
HIT000306662
(
CR749665
)
(Conserved hypothetical protein.)
genome : 71,528,982 - 71,533,196 (4,215)
query : 1 - 3,675 (3,675/3,734)
2 exons
identity = 0.999
3'(0.999;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15.5, extr 14, cyto_nucl 8.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199826)
HIX0199826
HIT000202146 (
NM_005455
)
(Zinc finger Ran-binding domain-containing protein 2; Zinc finger protein 265; Zinc finger, splicing;)
genome : 71,528,974 - 71,546,972 (17,999)
query : 1 - 3,145 (3,145/3,162)
11 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 27, cysk 2
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199826)
HIX0199826
HIT000319986 (
NM_203350
)
(Zinc finger Ran-binding domain-containing protein 2; Zinc finger protein 265; Zinc finger, splicing;)
genome : 71,528,974 - 71,546,972 (17,999)
query : 1 - 3,070 (3,070/3,087)
10 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199826)
HIX0199826
HIT000306364
(
CR749325
)
(Conserved hypothetical protein.)
genome : 71,528,974 - 71,534,435 (5,462)
query : 1 - 5,493 (5,493/5,510)
1 exon
identity = 0.986
3'(0.986)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 25, cyto_nucl 14.5, mito 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199826)
HIX0199826
HIT000065522
(
AF065391
)
(Zinc finger Ran-binding domain-containing protein 2; Zinc finger protein 265; Zinc finger, splicing;)
genome : 71,528,974 - 71,546,712 (17,739)
query : 1 - 2,807 (2,807/2,823)
10 exons
identity = 0.998
3'(0.997;0.994;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR001876 : Zinc finger, RanBP2-type
GO :
0008270 : Molecular Function : zinc ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199826)
HIX0199826
HIT000352200 (
ENST00000370920
)
(Zinc finger Ran-binding domain-containing protein 2; Zinc finger protein 265; Zinc finger, splicing;)
genome : 71,528,974 - 71,546,980 (18,007)
query : 1 - 3,078 (3,078/3,078)
10 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199826)
HIX0199826
HIT000093172
(
BC033648
)
(Zinc finger Ran-binding domain-containing protein 2; Zinc finger protein 265; Zinc finger, splicing;)
genome : 71,529,020 - 71,546,718 (17,699)
query : 1 - 2,770 (2,770/2,812)
10 exons
identity = 0.999
3'(0.999;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.990)5'
coverage = 1.000
InterPro :
IPR001876 : Zinc finger, RanBP2-type
GO :
0008270 : Molecular Function : zinc ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199826)
HIX0199826
HIT000581256 (
ENST00000477096
)
(Conserved hypothetical protein.)
genome : 71,528,980 - 71,533,196 (4,217)
query : 1 - 3,677 (3,677/3,677)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15.5, extr 14, cyto_nucl 8.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199826)
HIX0199826
HIT000006526
(
AK023252
)
(Zinc finger Ran-binding domain-containing protein 2 isoform 2.)
genome : 71,528,983 - 71,542,551 (13,569)
query : 1 - 2,614 (2,614/2,614)
8 exons
identity = 0.999
3'(0.999;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
InterPro :
IPR001876 : Zinc finger, RanBP2-type
GO :
0008270 : Molecular Function : zinc ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199826)
HIX0199826
HIT000012597
(
AK055983
)
(Conserved hypothetical protein.)
genome : 71,528,983 - 71,531,953 (2,971)
query : 1 - 2,431 (2,431/2,431)
2 exons
identity = 0.999
3'(0.999;0.997)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199826)
HIX0199826
HIT000330638
(
AK222858
)
(Zinc finger Ran-binding domain-containing protein 2; Zinc finger protein 265; Zinc finger, splicing;)
genome : 71,529,024 - 71,546,697 (17,674)
query : 1 - 2,745 (2,745/2,770)
10 exons
identity = 0.998
3'(0.998;0.994;1.000;1.000;1.000;1.000;1.000;
0.991;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR001876 : Zinc finger, RanBP2-type
GO :
0008270 : Molecular Function : zinc ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199826)
HIX0199826
HIT000025541
(
AL136945
)
Representative transcript
(Zinc finger Ran-binding domain-containing protein 2; Zinc finger protein 265; Zinc finger, splicing;)
genome : 71,529,020 - 71,546,694 (17,675)
query : 1 - 2,821 (2,821/2,837)
11 exons
identity = 1.000
3'(0.999;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR001876 : Zinc finger, RanBP2-type
GO :
0008270 : Molecular Function : zinc ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 27, cysk 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199826)
HIX0199826
HIT000106690 (
ENST00000254821
)
(Zinc finger Ran-binding domain-containing protein 2; Zinc finger protein 265; Zinc finger, splicing;)
genome : 71,529,020 - 71,546,694 (17,675)
query : 1 - 2,821 (2,821/2,821)
11 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 27, cysk 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199826)
HIX0199826
HIT000042987
(
AK123114
)
(Conserved hypothetical protein.)
genome : 71,529,022 - 71,531,370 (2,349)
query : 1 - 2,349 (2,349/2,349)
1 exon
identity = 0.999
3'(0.999)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199826)
HIX0199826
HIT000329503
(
AB209568
)
(Zinc finger Ran-binding domain-containing protein 2 isoform 2.)
genome : 71,529,025 - 71,546,685 (17,661)
query : 1 - 3,830 (3,830/3,830)
10 exons
identity = 0.999
3'(0.999;0.999;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR001876 : Zinc finger, RanBP2-type
GO :
0008270 : Molecular Function : zinc ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199826)
HIX0199826
HIT000052251
(
BC039814
)
(Zinc finger Ran-binding domain-containing protein 2 isoform 1.)
genome : 71,529,682 - 71,546,718 (17,037)
query : 1 - 2,183 (2,183/2,233)
11 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;0.994;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR001876 : Zinc finger, RanBP2-type
GO :
0008270 : Molecular Function : zinc ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 27, cysk 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199826)
HIX0199826
HIT000065523
(
AF065392
)
(Zinc finger Ran-binding domain-containing protein 2; Zinc finger protein 265; Zinc finger, splicing;)
genome : 71,530,736 - 71,546,712 (15,977)
query : 1 - 1,120 (1,120/1,136)
11 exons
identity = 0.997
3'(0.988;0.987;0.994;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR001876 : Zinc finger, RanBP2-type
GO :
0008270 : Molecular Function : zinc ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 27, cysk 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199826)
Ortholog candidate ( ->
Evola
)
Macaca
sp. (Macaque) : AB173956
Rattus
sp. (Rat) : AF013967
Gallus
sp. (Chicken) : AJ719609
Mus
sp. (Mouse) : AK150291
Danio
sp. (Zebrafish) : BC052752
Bos
sp. (Cow) : BC134559
Tetraodon
sp. (Tetraodon) : CR725353
Pongo
sp. (Orangutan) : CR860984
Monodelphis
sp. (Opossum) : ENSMODT00000000617
Oryzias
sp. (Medaka) : ENSORLT00000008192
Takifugu
sp. (Fugu) : SINFRUT00000131257
Pan
sp. (Chimpanzee) : XM_001166823
Equus
sp. (Horse) : XM_001499174
Canis
sp. (Dog) : XM_547334
HIX0199826
HIT000591212 (
ENST00000487510
)
(Zinc finger Ran-binding domain-containing protein 2 isoform 1.)
genome : 71,530,726 - 71,535,283 (4,558)
query : 1 - 579 (579/579)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 13, mito 11.5, mito_nucl 10, nucl 7.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199826)
HIX0199826
HIT000583990 (
ENST00000479947
)
(Zinc finger Ran-binding domain-containing protein 2 isoform 1.)
genome : 71,530,737 - 71,532,769 (2,033)
query : 1 - 470 (470/470)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199826)
HIX0199826
HIT000577600 (
ENST00000473260
)
(Conserved hypothetical protein.)
genome : 71,530,770 - 71,532,889 (2,120)
query : 1 - 482 (482/482)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 24, cyto_nucl 14.5, mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199826)
HIX0199826
HIT000470912 (
ENST00000384988
)
(Non-protein coding transcript.)
genome : 71,533,314 - 71,533,399 (86)
query : 1 - 86 (86/86)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199826)
HIX0199826
HIT000658085 (
NR_029707
)
(Non-protein coding transcript.)
genome : 71,533,314 - 71,533,399 (86)
query : 1 - 86 (86/86)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199826)
HIX0199826
HIT000087575
(
BC010962
)
(Zinc finger Ran-binding domain-containing protein 2 isoform 2.)
genome : 71,536,627 - 71,546,704 (10,078)
query : 1 - 592 (592/622)
7 exons
identity = 0.998
3'(1.000;1.000;1.000;1.000;1.000;1.000;0.988)5'
coverage = 1.000
InterPro :
IPR001876 : Zinc finger, RanBP2-type
GO :
0008270 : Molecular Function : zinc ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 13, nucl 11, cyto 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0199826)
HIX0029378
HIT000695557 (
ENST00000583678
)
(Conserved hypothetical protein.)
genome : 71,547,007 - 71,929,184 (382,178)
query : 1 - 551 (551/551)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 29
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029378)
HIX0029378
HIT000553340 (
ENST00000455406
)
(Hypothetical short protein.)
genome : 71,547,007 - 71,703,406 (156,400)
query : 1 - 783 (783/783)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 20, cyto 7, mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029378)
HIX0029378
HIT000726541 (
NR_046217
)
(Hypothetical short protein.)
genome : 71,547,007 - 71,703,406 (156,400)
query : 1 - 783 (783/783)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 20, cyto 7, mito 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029378)
HIX0029378
HIT000710906 (
ENST00000599146
)
(Hypothetical short protein.)
genome : 71,547,033 - 71,873,367 (326,335)
query : 1 - 745 (745/745)
9 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 25, mito 3, golg 2, cyto_mito 2, mito_nucl 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029378)
HIX0029378
HIT000708735 (
ENST00000596952
)
(Hypothetical short protein.)
genome : 71,547,036 - 71,668,105 (121,070)
query : 1 - 624 (624/624)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 15.5, mito_pero 9, extr 8, cyto 5.5, cyto_nucl 4,
extr_plas 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029378)
HIX0029378
HIT000511355 (
ENST00000413421
)
(Hypothetical short protein.)
genome : 71,547,044 - 71,733,913 (186,870)
query : 1 - 826 (826/826)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 14, extr 8, cyto_nucl 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029378)
HIX0029378
HIT000259478
(
BC054887
)
Representative transcript
(Hypothetical short protein.)
genome : 71,547,047 - 71,703,406 (156,360)
query : 1 - 743 (743/770)
4 exons
identity = 0.999
5'(0.980;1.000;1.000;1.000)3'
coverage = 0.997
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 20, cyto 7, mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029378)
HIX0029378
HIT000705959 (
ENST00000594152
)
(Hypothetical short protein.)
genome : 71,547,050 - 71,873,367 (326,318)
query : 1 - 600 (600/600)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 20, cyto 7, mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029378)
HIX0029378
HIT000513714 (
ENST00000415780
)
(Conserved hypothetical protein.)
genome : 71,558,813 - 71,702,881 (144,069)
query : 1 - 249 (249/249)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 22, nucl 7, cyto_nucl 5.83333, cyto 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029378)
HIX0029378
HIT000711851 (
ENST00000600103
)
(Hypothetical short protein.)
genome : 71,667,771 - 71,873,362 (205,592)
query : 1 - 702 (702/702)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 20, extr 9
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029378)
HIX0160219
HIT000509655 (
ENST00000411721
)
(Hypothetical short protein.)
genome : 71,716,682 - 71,717,802 (1,121)
query : 1 - 518 (518/518)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 23, nucl 4, cyto 4, cyto_nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0160219)
HIX0160524
HIT000520456 (
ENST00000422522
)
(Conserved hypothetical protein.)
genome : 71,832,737 - 71,832,986 (250)
query : 1 - 250 (250/250)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, cyto_nucl 9, cyto 8, nucl 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0160524)
HIX0019883
HIT000019658
(
AK094803
)
Representative transcript
(Conserved hypothetical protein.)
genome : 71,861,627 - 71,864,226 (2,600)
query : 1 - 2,600 (2,600/2,600)
1 exon
identity = 0.998
3'(0.998)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 13.5, extr 12, cyto_nucl 11.5, cyto 6.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019883)
HIX0029378
HIT000528539 (
ENST00000430605
)
(Non-protein coding transcript.)
genome : 71,867,530 - 71,873,407 (5,878)
query : 1 - 213 (213/213)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029378)
HIX0017992
HIT000051804
(
BC036771
)
(Neuronal growth regulator 1 precursor.)
genome : 71,868,625 - 72,566,614 (697,990)
query : 12 - 5,591 (5,580/5,605)
7 exons
identity = 0.999
3'(0.999;0.993;1.000)5'
coverage = 0.998
InterPro :
IPR003598 : Immunoglobulin subtype 2
IPR013098 : Immunoglobulin I-set
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 17, cyto_nucl 11.5, cysk 7, nucl 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017992)
HIX0017992
HIT000054798
(
BX538014
)
Representative transcript
(Neuronal growth regulator 1; IgLON family member 4; Precursor;)
genome : 71,868,627 - 72,748,181 (879,555)
query : 1 - 5,572 (5,572/5,582)
7 exons
identity = 0.998
3'(0.997;0.993;1.000)5'
coverage = 1.000
InterPro :
IPR003598 : Immunoglobulin subtype 2
IPR013098 : Immunoglobulin I-set
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 23, E.R. 4, plas 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017992)
Ortholog candidate ( ->
Evola
)
Rattus
sp. (Rat) : AB017139
Macaca
sp. (Macaque) : AB171680
Danio
sp. (Zebrafish) : AF241637
Mus
sp. (Mouse) : AK147253
Bos
sp. (Cow) : BC133651
Pongo
sp. (Orangutan) : CR861448
Gallus
sp. (Chicken) : ENSGALT00000032907
Tetraodon
sp. (Tetraodon) : GSTENT00019861001
Equus
sp. (Horse) : NM_001145864
Takifugu
sp. (Fugu) : SINFRUT00000179480
Pan
sp. (Chimpanzee) : XM_001167037
Monodelphis
sp. (Opossum) : XM_001364379
Canis
sp. (Dog) : XM_850432
HIX0017992
HIT000056674
(
BX648027
)
(Conserved hypothetical protein.)
genome : 71,868,626 - 72,058,651 (190,026)
query : 20 - 4,800 (4,781/4,807)
2 exons
identity = 0.999
3'(0.999;0.993)5'
coverage = 0.995
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, cyto 11, nucl 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017992)
HIX0017992
HIT000311543 (
ENST00000357731
)
(Neuronal growth regulator 1; IgLON family member 4; Precursor;)
genome : 71,868,625 - 72,748,417 (879,793)
query : 1 - 5,809 (5,809/5,809)
7 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 23, E.R. 4, plas 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017992)
HIX0017992
HIT000215092 (
NM_173808
)
(Neuronal growth regulator 1; IgLON family member 4; Precursor;)
genome : 71,868,625 - 72,748,277 (879,653)
query : 1 - 5,669 (5,669/5,669)
7 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 23, E.R. 4, plas 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017992)
HIX0017992
HIT000117467 (
ENST00000306821
)
(Neuronal growth regulator 1 precursor.)
genome : 71,868,627 - 72,566,613 (697,987)
query : 1 - 5,577 (5,577/5,577)
7 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 17, cyto_nucl 11.5, cysk 7, nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017992)
HIX0017992
HIT000306256
(
CR749215
)
(Conserved hypothetical protein.)
genome : 71,869,423 - 72,058,623 (189,201)
query : 1 - 3,956 (3,956/3,976)
2 exons
identity = 0.998
3'(0.999;0.992)5'
coverage = 0.999
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, cyto 11, nucl 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017992)
HIX0017992
HIT000017174
(
AK092307
)
(Neuronal growth regulator 1; IgLON family member 4; Precursor;)
genome : 71,871,818 - 72,748,184 (876,367)
query : 1 - 2,383 (2,383/2,383)
7 exons
identity = 0.998
3'(0.999;0.993;1.000)5'
coverage = 1.000
InterPro :
IPR003598 : Immunoglobulin subtype 2
IPR013098 : Immunoglobulin I-set
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 23, E.R. 4, plas 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017992)
HIX0017992
HIT000490105
(
AK295481
)
(Neuronal growth regulator 1 precursor.)
genome : 71,872,247 - 72,748,175 (875,929)
query : 1 - 1,813 (1,813/1,813)
6 exons
identity = 0.999
3'(1.000;0.993;1.000)5'
coverage = 1.000
InterPro :
IPR003598 : Immunoglobulin subtype 2
IPR013098 : Immunoglobulin I-set
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017992)
HIX0017992
HIT000532134 (
ENST00000434200
)
(Neuronal growth regulator 1 precursor.)
genome : 71,873,129 - 72,748,171 (875,043)
query : 1 - 927 (927/927)
6 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 31
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017992)
HIX0017992
HIT000578651 (
ENST00000474357
)
(Non-protein coding transcript.)
genome : 71,873,175 - 71,905,521 (32,347)
query : 1 - 192 (192/192)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017992)
HIX0029378
HIT000699150 (
ENST00000587306
)
(Hypothetical short protein.)
genome : 71,873,316 - 71,934,193 (60,878)
query : 1 - 661 (661/661)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19.5, cyto_nucl 11, mito 7, extr 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029378)
HIX0029378
HIT000697860 (
ENST00000586006
)
(Hypothetical short protein.)
genome : 71,873,316 - 71,888,658 (15,343)
query : 1 - 888 (888/888)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 10, cyto_nucl 9, cysk 9, extr 6, nucl 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029378)
HIX0029378
HIT000698911 (
ENST00000587066
)
(Hypothetical short protein.)
genome : 71,873,323 - 71,929,063 (55,741)
query : 1 - 613 (613/613)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, cyto 8, cyto_nucl 7.83333, extr_plas 7.83333,
nucl 6.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029378)
HIX0029378
HIT000697272 (
ENST00000585415
)
(Hypothetical short protein.)
genome : 71,873,327 - 71,955,652 (82,326)
query : 1 - 782 (782/782)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 25, nucl 3, cyto 3, cyto_nucl 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029378)
HIX0029378
HIT000697355 (
ENST00000585499
)
(Hypothetical short protein.)
genome : 71,873,327 - 71,888,658 (15,332)
query : 1 - 821 (821/821)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 10, cyto_nucl 9, cysk 9, extr 6, nucl 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029378)
HIX0029378
HIT000702021 (
ENST00000590186
)
(Hypothetical short protein.)
genome : 71,874,622 - 71,952,130 (77,509)
query : 1 - 686 (686/686)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, cyto 8, cyto_nucl 7.83333, extr_plas 7.83333,
nucl 6.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029378)
HIX0029378
HIT000703476 (
ENST00000591654
)
(Hypothetical short protein.)
genome : 71,929,092 - 71,955,586 (26,495)
query : 1 - 719 (719/719)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 13.5, cyto_nucl 12.5, cyto 10.5, extr 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029378)
HIX0161235
HIT000544372 (
ENST00000446438
)
(Hypothetical short protein.)
genome : 72,036,639 - 72,039,241 (2,603)
query : 1 - 170 (170/170)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
This sequence is too short.
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0161235)
HIX0000691
HIT000118885 (
ENST00000310961
)
(Leucine-rich repeat-containing protein 7.)
genome : 70,034,081 - 70,589,171 (555,091)
query : 1 - 6,507 (6,507/6,507)
27 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 13, mito 11, nucl 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000691)
HIX0000691
HIT000208066 (
NM_020794
)
(Leucine-rich repeat-containing protein 7; Densin-180; Densin; Protein LAP1;)
genome : 70,225,858 - 70,589,170 (363,313)
query : 1 - 6,244 (6,244/6,313)
25 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 24, cyto 5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000691)
HIX0000691
HIT000079621
(
AF434715
)
Representative transcript
(Leucine-rich repeat-containing protein 7; Densin-180; Densin; Protein LAP1;)
genome : 70,225,858 - 70,587,926 (362,069)
query : 1 - 5,000 (5,000/5,000)
25 exons
identity = 1.000
5'(1.000;1.000;0.999;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
InterPro :
IPR001478 : PDZ domain
IPR001611 : Leucine-rich repeat
IPR025875 : Leucine rich repeat 4
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 24, cyto 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000691)
Ortholog candidate ( ->
Evola
)
Macaca
sp. (Macaque) : AB047969
Mus
sp. (Mouse) : AK122498
Gallus
sp. (Chicken) : ENSGALT00000018410
Oryzias
sp. (Medaka) : ENSORLT00000013951
Pongo
sp. (Orangutan) : ENSPPYT00000001498
Tetraodon
sp. (Tetraodon) : GSTENT00033538001
Takifugu
sp. (Fugu) : SINFRUT00000128751
Rattus
sp. (Rat) : U66707
Pan
sp. (Chimpanzee) : XM_001165403
Monodelphis
sp. (Opossum) : XM_001379445
Equus
sp. (Horse) : XM_001498304
Danio
sp. (Zebrafish) : XM_001920777
Canis
sp. (Dog) : XM_547339
Bos
sp. (Cow) : XM_583226
HIX0000691
HIT000102302 (
ENST00000035383
)
(Leucine-rich repeat-containing protein 7; Densin-180; Densin; Protein LAP1;)
genome : 70,225,858 - 70,587,926 (362,069)
query : 1 - 5,000 (5,000/5,000)
25 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 24, cyto 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000691)
HIX0000691
HIT000389968
(
BC128989
)
(Leucine-rich repeat-containing protein 7.)
genome : 70,225,870 - 70,587,677 (361,808)
query : 3 - 3,998 (3,996/4,013)
21 exons
identity = 0.999
5'(0.999;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 0.996
InterPro :
IPR001478 : PDZ domain
IPR016313 : Disks large 1
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 14, cyto 13.5, cyto_nucl 9, nucl 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000691)
HIX0000691
HIT000513709 (
ENST00000415775
)
(Leucine-rich repeat-containing protein 7.)
genome : 70,225,870 - 70,587,677 (361,808)
query : 1 - 3,996 (3,996/3,996)
21 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 14, cyto 12.5, cyto_nucl 9, nucl 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000691)
HIX0000691
HIT000306630
(
CR749629
)
(Leucine-rich repeat-containing protein 7.)
genome : 70,225,908 - 70,589,170 (363,263)
query : 1 - 6,194 (6,194/6,263)
25 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.999)3'
coverage = 1.000
InterPro :
IPR001478 : PDZ domain
IPR001611 : Leucine-rich repeat
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18, cyto_nucl 14.5, cyto 9, golg 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000691)
HIX0000693
HIT000201501 (
NM_004768
)
(Serine/arginine-rich splicing factor 11; Arginine-rich 54 kDa nuclear protein; p54; Splicing factor, arginine/serine-rich 11;)
genome : 70,671,365 - 70,717,700 (46,336)
query : 1 - 2,791 (2,791/2,811)
13 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29.5, cyto_nucl 17.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000693)
HIX0000693
HIT000655727 (
NM_001190987
)
(Serine/arginine-rich splicing factor 11; Arginine-rich 54 kDa nuclear protein; p54; Splicing factor, arginine/serine-rich 11;)
genome : 70,671,365 - 70,717,700 (46,336)
query : 1 - 2,785 (2,785/2,805)
13 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29.5, cyto_nucl 17.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000693)
HIX0000693
HIT000352231 (
ENST00000370951
)
(Serine/arginine-rich splicing factor 11; Arginine-rich 54 kDa nuclear protein; p54; Splicing factor, arginine/serine-rich 11;)
genome : 70,671,365 - 70,717,300 (45,936)
query : 1 - 2,385 (2,385/2,385)
13 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29.5, cyto_nucl 17.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000693)
HIX0000693
HIT000090671
(
BC022815
)
(Serine/arginine-rich splicing factor 11; Arginine-rich 54 kDa nuclear protein; p54; Splicing factor, arginine/serine-rich 11;)
genome : 70,671,365 - 70,703,239 (31,875)
query : 1 - 843 (843/863)
7 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;0.992)3'
coverage = 0.998
InterPro :
IPR000504 : RNA recognition motif domain
IPR012677 : Nucleotide-binding alpha-beta plait domain
GO :
0000166 : Molecular Function : nucleotide binding
0003676 : Molecular Function : nucleic acid binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 22.5, cyto_nucl 15, cyto 6.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000693)
HIX0000693
HIT000092778
(
BC032727
)
(Serine/arginine-rich splicing factor 11; Arginine-rich 54 kDa nuclear protein; p54; Splicing factor, arginine/serine-rich 11;)
genome : 70,671,386 - 70,703,239 (31,854)
query : 9 - 830 (822/847)
7 exons
identity = 0.998
5'(0.987;1.000;1.000;1.000;1.000;1.000;0.992)3'
coverage = 0.988
InterPro :
IPR000504 : RNA recognition motif domain
IPR012677 : Nucleotide-binding alpha-beta plait domain
GO :
0000166 : Molecular Function : nucleotide binding
0003676 : Molecular Function : nucleic acid binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 20.5, cyto_nucl 15, cyto 8.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000693)
HIX0000693
HIT000196291
(
M74002
)
Representative transcript
(Serine/arginine-rich splicing factor 11; Arginine-rich 54 kDa nuclear protein; p54; Splicing factor, arginine/serine-rich 11;)
genome : 70,671,407 - 70,717,684 (46,278)
query : 2 - 2,736 (2,735/2,736)
13 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;0.997)3'
coverage = 1.000
InterPro :
IPR000504 : RNA recognition motif domain
IPR012677 : Nucleotide-binding alpha-beta plait domain
GO :
0000166 : Molecular Function : nucleotide binding
0003676 : Molecular Function : nucleic acid binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29.5, cyto_nucl 17.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000693)
Ortholog candidate ( ->
Evola
)
Gallus
sp. (Chicken) : AJ720592
Danio
sp. (Zebrafish) : BC044186
Mus
sp. (Mouse) : BC055763
Rattus
sp. (Rat) : BC099157
Bos
sp. (Cow) : BC118154
Tetraodon
sp. (Tetraodon) : CR661883
Monodelphis
sp. (Opossum) : ENSMODT00000000689
Oryzias
sp. (Medaka) : ENSORLT00000009712
Oryzias
sp. (Medaka) : ENSORLT00000021708
Pongo
sp. (Orangutan) : ENSPPYT00000001496
Tetraodon
sp. (Tetraodon) : GSTENT00008319001
Takifugu
sp. (Fugu) : SINFRUT00000164417
Pan
sp. (Chimpanzee) : XM_001166106
Equus
sp. (Horse) : XM_001498263
Canis
sp. (Dog) : XM_862855
HIX0000693
HIT000352230 (
ENST00000370950
)
(Serine/arginine-rich splicing factor 11; Arginine-rich 54 kDa nuclear protein; p54; Splicing factor, arginine/serine-rich 11;)
genome : 70,671,407 - 70,718,735 (47,329)
query : 1 - 3,784 (3,784/3,784)
13 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29.5, cyto_nucl 17.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000693)
HIX0000693
HIT000052384
(
BC040436
)
(Serine/arginine-rich splicing factor 11; Arginine-rich 54 kDa nuclear protein; p54; Splicing factor, arginine/serine-rich 11;)
genome : 70,671,407 - 70,717,294 (45,888)
query : 1 - 2,337 (2,337/2,351)
13 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR000504 : RNA recognition motif domain
IPR012677 : Nucleotide-binding alpha-beta plait domain
GO :
0000166 : Molecular Function : nucleotide binding
0003676 : Molecular Function : nucleic acid binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29.5, cyto_nucl 17.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000693)
HIX0000693
HIT000505225 (
ENST00000405432
)
(Serine/arginine-rich splicing factor 11; Arginine-rich 54 kDa nuclear protein; p54; Splicing factor, arginine/serine-rich 11;)
genome : 70,671,407 - 70,716,488 (45,082)
query : 1 - 1,534 (1,534/1,534)
13 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29.5, cyto_nucl 17.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000693)
HIX0000693
HIT000429313
(
AK310447
)
(CASP-like protein VIT_05s0020g01830;)
genome : 70,671,407 - 70,697,511 (26,105)
query : 1 - 1,150 (1,150/1,150)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 15, cyto_nucl 9, cyto 8.5, nucl 6.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000693)
HIX0000693
HIT000494771
(
AK300147
)
(Serine/arginine-rich splicing factor 11; Arginine-rich 54 kDa nuclear protein; p54; Splicing factor, arginine/serine-rich 11;)
genome : 70,671,418 - 70,697,253 (25,836)
query : 1 - 943 (943/943)
5 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;0.998)3'
coverage = 1.000
InterPro :
IPR000504 : RNA recognition motif domain
IPR012677 : Nucleotide-binding alpha-beta plait domain
GO :
0000166 : Molecular Function : nucleotide binding
0003676 : Molecular Function : nucleic acid binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 15.5, cyto_nucl 14, cyto 9.5, extr 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000693)
HIX0000693
HIT000552369 (
ENST00000454435
)
(Serine/arginine-rich splicing factor 11; Arginine-rich 54 kDa nuclear protein; p54; Splicing factor, arginine/serine-rich 11;)
genome : 70,671,418 - 70,697,253 (25,836)
query : 1 - 943 (943/943)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 15.5, cyto_nucl 14, cyto 9.5, extr 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000693)
HIX0000693
HIT000579458 (
ENST00000475204
)
(Serine/arginine-rich splicing factor 11; Arginine-rich 54 kDa nuclear protein; p54; Splicing factor, arginine/serine-rich 11;)
genome : 70,687,053 - 70,701,233 (14,181)
query : 1 - 760 (760/760)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18.5, cyto_nucl 17, cyto 10.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000693)
HIX0000693
HIT000089259
(
BC017359
)
(Serine/arginine-rich splicing factor 11; Arginine-rich 54 kDa nuclear protein; p54; Splicing factor, arginine/serine-rich 11;)
genome : 70,687,079 - 70,716,073 (28,995)
query : 1 - 1,406 (1,406/1,423)
11 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR000504 : RNA recognition motif domain
IPR012677 : Nucleotide-binding alpha-beta plait domain
GO :
0000166 : Molecular Function : nucleotide binding
0003676 : Molecular Function : nucleic acid binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 27.5, cyto_nucl 16
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000693)
HIX0000693
HIT000478522 (
ENST00000395136
)
(Serine/arginine-rich splicing factor 11; Arginine-rich 54 kDa nuclear protein; p54; Splicing factor, arginine/serine-rich 11;)
genome : 70,687,079 - 70,716,075 (28,997)
query : 1 - 1,408 (1,408/1,408)
11 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 27.5, cyto_nucl 16
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000693)
HIX0000693
HIT000496294
(
AK301670
)
(Serine/arginine-rich splicing factor 11; Arginine-rich 54 kDa nuclear protein; p54; Splicing factor, arginine/serine-rich 11;)
genome : 70,687,145 - 70,703,239 (16,095)
query : 1 - 1,014 (1,014/1,016)
7 exons
identity = 0.998
5'(1.000;1.000;0.991;1.000;1.000;1.000;0.992)3'
coverage = 0.998
InterPro :
IPR000504 : RNA recognition motif domain
IPR012677 : Nucleotide-binding alpha-beta plait domain
GO :
0000166 : Molecular Function : nucleotide binding
0003676 : Molecular Function : nucleic acid binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18.5, cyto_nucl 17, cyto 10.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000693)
HIX0000693
HIT000534095 (
ENST00000436161
)
(Serine/arginine-rich splicing factor 11; Arginine-rich 54 kDa nuclear protein; p54; Splicing factor, arginine/serine-rich 11;)
genome : 70,687,145 - 70,703,239 (16,095)
query : 1 - 1,014 (1,014/1,014)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18.5, cyto_nucl 17, cyto 10.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000693)
HIX0000693
HIT000573705 (
ENST00000469170
)
(Serine/arginine-rich splicing factor 11; Arginine-rich 54 kDa nuclear protein; p54; Splicing factor, arginine/serine-rich 11;)
genome : 70,687,163 - 70,696,951 (9,789)
query : 1 - 668 (668/668)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16.5, cyto_nucl 16.5, cyto 11.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000693)
HIX0000693
HIT000086164
(
BC002784
)
(Serine/arginine-rich splicing factor 11; Arginine-rich 54 kDa nuclear protein; p54; Splicing factor, arginine/serine-rich 11;)
genome : 70,687,185 - 70,710,498 (23,314)
query : 1 - 1,067 (1,067/1,098)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 0.990
InterPro :
IPR000504 : RNA recognition motif domain
IPR012677 : Nucleotide-binding alpha-beta plait domain
GO :
0000166 : Molecular Function : nucleotide binding
0003676 : Molecular Function : nucleic acid binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000693)
HIX0000693
HIT000087389
(
BC009840
)
(Serine/arginine-rich splicing factor 11; Arginine-rich 54 kDa nuclear protein; p54; Splicing factor, arginine/serine-rich 11;)
genome : 70,687,202 - 70,703,239 (16,038)
query : 1 - 840 (840/859)
6 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;0.992)3'
coverage = 0.998
InterPro :
IPR000504 : RNA recognition motif domain
IPR012677 : Nucleotide-binding alpha-beta plait domain
GO :
0000166 : Molecular Function : nucleotide binding
0003676 : Molecular Function : nucleic acid binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 22.5, cyto_nucl 15, cyto 6.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000693)
HIX0000693
HIT000590409 (
ENST00000486667
)
(Serine/arginine-rich splicing factor 11; Arginine-rich 54 kDa nuclear protein; p54; Splicing factor, arginine/serine-rich 11;)
genome : 70,687,407 - 70,703,233 (15,827)
query : 1 - 662 (662/662)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 17.5, nucl 16, cyto 13
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000693)
HIX0000693
HIT000585615 (
ENST00000481648
)
(Serine/arginine-rich splicing factor 11; Arginine-rich 54 kDa nuclear protein; p54; Splicing factor, arginine/serine-rich 11;)
genome : 70,694,105 - 70,700,414 (6,310)
query : 1 - 389 (389/389)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 14, nucl 12, cyto 10, extr 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000693)
HIX0000693
HIT000055194
(
BX640645
)
(Serine/arginine-rich splicing factor 11 isoform 2.)
genome : 70,695,961 - 70,717,678 (21,718)
query : 1 - 4,006 (4,006/4,093)
11 exons
identity = 0.998
5'(0.999;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;0.996)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 24, plas 3, nucl 2, extr_plas 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000693)
HIX0000693
HIT000588024 (
ENST00000484162
)
(Serine/arginine-rich splicing factor 11 isoform 2.)
genome : 70,695,961 - 70,717,680 (21,720)
query : 1 - 4,008 (4,008/4,008)
11 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 24, plas 3, nucl 2, extr_plas 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000693)
HIX0000696
pHIT000097964 ( pHIT000097964 )
(Prostaglandin E2 receptor EP3 subtype; PGE receptor EP3 subtype; PGE2 receptor EP3 subtype; PGE2-R; Prostanoid EP3 receptor;)
genome : 71,457,295 - 71,513,260 (55,966)
query : 1 - 1,500 (1,500/1,500)
5 exons
InterPro :
IPR000265 : Prostanoid EP3 receptor
IPR001244 : Prostaglandin DP receptor
IPR001481 : Prostanoid EP3 receptor, type 2
IPR008365 : Prostanoid receptor
GO :
0004955 : Molecular Function : prostaglandin receptor activity
0004957 : Molecular Function : prostaglandin E receptor activity
0007186 : Biological Process : G-protein coupled receptor signaling pathway
0016021 : Cellular Component : integral component of membrane
SOSUI :
MEMBRANE PROTEIN
JIGSAW prediction
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000696)
CAGE tag :
T01R043FBD47
HIX0000696
pHIT000072155 ( pHIT000072155 )
(Prostaglandin E2 receptor EP3 subtype; PGE receptor EP3 subtype; PGE2 receptor EP3 subtype; PGE2-R; Prostanoid EP3 receptor;)
genome : 71,460,558 - 71,513,260 (52,703)
query : 1 - 1,116 (1,116/1,116)
3 exons
InterPro :
IPR000265 : Prostanoid EP3 receptor
IPR001244 : Prostaglandin DP receptor
IPR001481 : Prostanoid EP3 receptor, type 2
IPR008365 : Prostanoid receptor
GO :
0004955 : Molecular Function : prostaglandin receptor activity
0004957 : Molecular Function : prostaglandin E receptor activity
0007186 : Biological Process : G-protein coupled receptor signaling pathway
0016021 : Cellular Component : integral component of membrane
SOSUI :
MEMBRANE PROTEIN
JIGSAW prediction
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000696)
CAGE tag :
H08BA01E0701,H08BA02A2011,H08BA09O1503
H08BA16B0804,H08BA24B0103
AL158840.14
70500001-70516456 F +
NCBI
AL157948.10
70516457-70609326 F +
NCBI
AL353771.8
70609327-70738938 F +
NCBI
AL354721.18
70738939-70794008 F +
NCBI
AL158839.11
70794009-70862118 F +
NCBI
AL354872.9
70862119-71011896 F +
NCBI
AL592104.6
71011897-71141385 F +
NCBI
AL513285.10
71141386-71237363 F +
NCBI
AL662898.7
71237364-71240656 F +
NCBI
AL158087.12
71240657-71391345 F +
NCBI
AL031429.11
71391346-71522566 F +
NCBI
AL512443.7
71522567-71576179 F +
NCBI
AL360297.12
71576180-71744060 F +
NCBI
AL358453.8
71744061-71850995 F +
NCBI
AL627317.7
71850996-71942628 F +
NCBI
AL354949.10
71942629-72100000 F +
NCBI