bases per tick :
500
200
100
50
20
10
5
2
kb first site :
main :
All Human Genes
JIGSAW prediction
ESTs assembly
homology :
UCSC
CCDS
Pseudogene.org
Conserved regions (
Segmental duplication
P.troglodytes
P.abelii
M.mulatta
M.musculus
R.norvegicus
C.familiaris
E.caballus
B.taurus
M.domestica
G.gallus
D.rerio
O.latipes
T.nigroviridis
T.rubripes
)
gene prediction :
FGENESH
GenScan
HMMgene
tRNA
show... :
SNPs
ESTs(summary)
ESTs(detail)
CAGE tag(summary)
CAGE tag(detail)
sequence viewer :
( start, end )
( middle, total length )
= (
,
)
HIX0020579
HIT000243073
(
AF447871
)
(Hypothetical protein.)
genome : 93,968,457 - 93,970,580 (2,124)
query : 2 - 2,125 (2,124/2,182)
1 exon
identity = 0.999
3'(0.999)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 30
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0020579)
HIX0020579
HIT000016021
(
AK091154
)
Representative transcript
(Hypothetical short protein.)
genome : 93,968,463 - 93,972,581 (4,119)
query : 1 - 4,119 (4,119/4,119)
1 exon
identity = 0.999
3'(0.999)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 22, cyto 5, nucl 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0020579)
HIX0018470
HIT000198636 (
NM_001698
)
(Methylglutaconyl-CoA hydratase, mitochondrial precursor.)
genome : 93,976,098 - 94,124,206 (148,109)
query : 1 - 1,587 (1,587/1,601)
10 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 4.2.1.18
KEGG pathway :
00280 : Valine, leucine and isoleucine degradation (34)
01100 : Metabolic pathways (1346)
InterPro :
IPR001753 : Crotonase, core
IPR014748 : Crontonase, C-terminal
IPR018376 : Enoyl-CoA hydratase/isomerase, conserved site
GO :
0003824 : Molecular Function : catalytic activity
0008152 : Biological Process : metabolic process
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 10, extr 9, cyto 8.5, E.R._mito 7,
cyto_pero 5.83333, cyto_nucl 5.16667
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0018470)
HIX0018470
HIT000038917
(
BC020722
)
(Methylglutaconyl-CoA hydratase, mitochondrial; EC=4.2.1.18; AU-specific RNA-binding enoyl-CoA hydratase; AU-binding protein/enoyl-CoA hydratase; Precursor;)
genome : 93,976,116 - 94,124,195 (148,080)
query : 1 - 1,471 (1,471/1,501)
9 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 0.999
InterPro :
IPR001753 : Crotonase, core
IPR014748 : Crontonase, C-terminal
IPR018376 : Enoyl-CoA hydratase/isomerase, conserved site
GO :
0003824 : Molecular Function : catalytic activity
0008152 : Biological Process : metabolic process
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 10, mito 9, cyto 8, E.R._mito 6,
cyto_nucl 5.66667, cyto_pero 5.66667
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0018470)
HIX0018470
HIT000116483 (
ENST00000303617
)
(Methylglutaconyl-CoA hydratase, mitochondrial; EC=4.2.1.18; AU-specific RNA-binding enoyl-CoA hydratase; AU-binding protein/enoyl-CoA hydratase; Precursor;)
genome : 93,976,099 - 94,124,206 (148,108)
query : 1 - 1,499 (1,499/1,499)
9 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
InterPro :
IPR001753 : Crotonase, core
IPR014748 : Crontonase, C-terminal
IPR018376 : Enoyl-CoA hydratase/isomerase, conserved site
GO :
0003824 : Molecular Function : catalytic activity
0008152 : Biological Process : metabolic process
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17.5, cyto_nucl 11.1667, cyto_pero 10.5, extr 7,
mito 3, E.R._mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0018470)
HIX0018470
HIT000357011 (
ENST00000375731
)
(Methylglutaconyl-CoA hydratase, mitochondrial precursor.)
genome : 93,976,099 - 94,124,206 (148,108)
query : 1 - 1,586 (1,586/1,586)
10 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 22, mito 6, extr 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0018470)
HIX0018470
HIT000323781
(
X79888
)
Representative transcript
(Methylglutaconyl-CoA hydratase, mitochondrial precursor.)
genome : 93,976,105 - 94,124,175 (148,071)
query : 1 - 1,548 (1,548/1,548)
10 exons
identity = 0.998
3'(0.997;1.000;1.000;1.000;1.000;0.989;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR001753 : Crotonase, core
IPR014748 : Crontonase, C-terminal
IPR018376 : Enoyl-CoA hydratase/isomerase, conserved site
GO :
0003824 : Molecular Function : catalytic activity
0008152 : Biological Process : metabolic process
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 10, extr 9, cyto 8.5, E.R._mito 7,
cyto_pero 5.83333, cyto_nucl 5.16667
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0018470)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AF118386
Danio
sp. (Zebrafish) : BC078266
Rattus
sp. (Rat) : BC091414
Tetraodon
sp. (Tetraodon) : CR734056
Bos
sp. (Cow) : ENSBTAT00000044380
Monodelphis
sp. (Opossum) : ENSMODT00000024445
Oryzias
sp. (Medaka) : ENSORLT00000018385
Pongo
sp. (Orangutan) : ENSPPYT00000022589
Takifugu
sp. (Fugu) : SINFRUT00000176925
Macaca
sp. (Macaque) : XM_001101578
Equus
sp. (Horse) : XM_001495308
Pan
sp. (Chimpanzee) : XM_520124
Canis
sp. (Dog) : XM_533549
Bos
sp. (Cow) : XM_591435
HIX0018470
HIT000300147
(
CR620952
)
(Similar to Methylglutaconyl-CoA hydratase, mitochondrial; EC=4.2.1.18; AU-specific RNA-binding enoyl-CoA hydratase; AU-binding protein/enoyl-CoA hydratase; Precursor;)
genome : 93,976,130 - 94,124,145 (148,016)
query : 1 - 1,494 (1,494/1,494)
10 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR001753 : Crotonase, core
IPR014748 : Crontonase, C-terminal
IPR018376 : Enoyl-CoA hydratase/isomerase, conserved site
GO :
0003824 : Molecular Function : catalytic activity
0008152 : Biological Process : metabolic process
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_mito 11.6667, mito 11.5, cyto 11, E.R._mito 8
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0018470)
HIX0018470
HIT000578014 (
ENST00000473695
)
(Similar to Methylglutaconyl-CoA hydratase, mitochondrial; EC=4.2.1.18; AU-specific RNA-binding enoyl-CoA hydratase; AU-binding protein/enoyl-CoA hydratase; Precursor;)
genome : 93,976,242 - 93,983,201 (6,960)
query : 1 - 632 (632/632)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22.5, cyto_nucl 16, nucl 6.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0018470)
HIX0035007
HIT000044015
(
AK124142
)
Representative transcript
(Hypothetical protein.)
genome : 93,977,822 - 93,981,908 (4,087)
query : 1 - 4,086 (4,086/4,086)
1 exon
identity = 0.999
5'(0.999)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 13, nucl 12, cyto 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0035007)
HIX0035117
HIT000098011
(
BC045178
)
Representative transcript
(Hypothetical short protein.)
genome : 94,035,854 - 94,039,649 (3,796)
query : 1 - 3,799 (3,799/3,814)
1 exon
identity = 0.998
3'(0.998)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 26, cyto 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0035117)
HIX0018470
HIT000497077
(
AK302453
)
(Similar to Methylglutaconyl-CoA hydratase, mitochondrial; EC=4.2.1.18; AU-specific RNA-binding enoyl-CoA hydratase; AU-binding protein/enoyl-CoA hydratase; Precursor;)
genome : 94,056,665 - 94,124,177 (67,513)
query : 1 - 1,076 (1,076/1,076)
7 exons
identity = 0.997
3'(0.995;1.000;0.989;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR001753 : Crotonase, core
IPR018376 : Enoyl-CoA hydratase/isomerase, conserved site
GO :
0003824 : Molecular Function : catalytic activity
0008152 : Biological Process : metabolic process
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, mito 6.5, E.R._mito 5.5, cyto_nucl 5, nucl 4,
cyto 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0018470)
HIX0018470
HIT000520325 (
ENST00000422391
)
(Similar to Methylglutaconyl-CoA hydratase, mitochondrial; EC=4.2.1.18; AU-specific RNA-binding enoyl-CoA hydratase; AU-binding protein/enoyl-CoA hydratase; Precursor;)
genome : 94,056,967 - 94,124,206 (67,240)
query : 1 - 803 (803/803)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR001753 : Crotonase, core
IPR018376 : Enoyl-CoA hydratase/isomerase, conserved site
GO :
0003824 : Molecular Function : catalytic activity
0008152 : Biological Process : metabolic process
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 12, cyto 7.5, cyto_nucl 7.33333, nucl 5,
cyto_pero 4.66667, mito 4.5, E.R._mito 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0018470)
HIX0018470
HIT000582570 (
ENST00000478465
)
(Similar to Methylglutaconyl-CoA hydratase, mitochondrial; EC=4.2.1.18; AU-specific RNA-binding enoyl-CoA hydratase; AU-binding protein/enoyl-CoA hydratase; Precursor;)
genome : 94,060,273 - 94,124,169 (63,897)
query : 1 - 751 (751/751)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR001753 : Crotonase, core
IPR018376 : Enoyl-CoA hydratase/isomerase, conserved site
GO :
0003824 : Molecular Function : catalytic activity
0008152 : Biological Process : metabolic process
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18, extr 6, mito 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0018470)
HIX0018470
HIT000579289 (
ENST00000475023
)
(Similar to Methylglutaconyl-CoA hydratase, mitochondrial; EC=4.2.1.18; AU-specific RNA-binding enoyl-CoA hydratase; AU-binding protein/enoyl-CoA hydratase; Precursor;)
genome : 94,104,997 - 94,118,403 (13,407)
query : 1 - 641 (641/641)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR001753 : Crotonase, core
GO :
0003824 : Molecular Function : catalytic activity
0008152 : Biological Process : metabolic process
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 14, extr 11, cyto 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0018470)
AL158071.23
93970152-94000200 F +
NCBI
AL513353.7
94000201-94103425 F +
NCBI
AL353645.16
94103426-94130151 F +
NCBI