bases per tick :
500
200
100
50
20
10
5
2
kb first site :
main :
All Human Genes
JIGSAW prediction
ESTs assembly
homology :
UCSC
CCDS
Pseudogene.org
Conserved regions (
Segmental duplication
P.troglodytes
P.abelii
M.mulatta
M.musculus
R.norvegicus
C.familiaris
E.caballus
B.taurus
M.domestica
G.gallus
D.rerio
O.latipes
T.nigroviridis
T.rubripes
)
gene prediction :
FGENESH
GenScan
HMMgene
tRNA
show... :
SNPs
ESTs(summary)
ESTs(detail)
CAGE tag(summary)
CAGE tag(detail)
sequence viewer :
( start, end )
( middle, total length )
= (
,
)
HIX0201319
HIT000127195 (
ENST00000331373
)
(Protein kinase-like protein SgK196.)
genome : 42,948,657 - 42,978,323 (29,667)
query : 1 - 1,615 (1,615/1,615)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, nucl 11, cyto 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201319)
HIX0201319
HIT000210483 (
NM_032237
)
(Protein kinase-like protein SgK196.)
genome : 42,948,657 - 42,978,323 (29,667)
query : 1 - 1,615 (1,615/1,615)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR000719 : Protein kinase, catalytic domain
IPR001245 : Serine-threonine/tyrosine-protein kinase
IPR011009 : Protein kinase-like domain
GO :
0004672 : Molecular Function : protein kinase activity
0005524 : Molecular Function : ATP binding
0006468 : Biological Process : protein phosphorylation
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 24, pero 3, E.R. 2, lyso 2
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201319)
HIX0201319
HIT000618358 (
ENST00000518991
)
(Similar to Protein kinase-like protein SgK196; Sugen kinase 196;)
genome : 42,948,658 - 42,977,369 (28,712)
query : 1 - 564 (564/564)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 31
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201319)
HIX0201319
HIT000387156
(
BC113703
)
Representative transcript
(Protein kinase-like protein SgK196.)
genome : 42,958,669 - 42,978,047 (19,379)
query : 16 - 1,118 (1,103/1,118)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 0.987
InterPro :
IPR000719 : Protein kinase, catalytic domain
IPR001245 : Serine-threonine/tyrosine-protein kinase
IPR011009 : Protein kinase-like domain
GO :
0004672 : Molecular Function : protein kinase activity
0005524 : Molecular Function : ATP binding
0006468 : Biological Process : protein phosphorylation
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 24, pero 3, E.R. 2, lyso 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201319)
Ortholog candidate ( ->
Evola
)
Macaca
sp. (Macaque) : AB070191
Gallus
sp. (Chicken) : AJ851801
Mus
sp. (Mouse) : AK043620
Danio
sp. (Zebrafish) : BC085371
Rattus
sp. (Rat) : BC097466
Bos
sp. (Cow) : BC140550
Monodelphis
sp. (Opossum) : ENSMODT00000012730
Pongo
sp. (Orangutan) : ENSPPYT00000021653
Tetraodon
sp. (Tetraodon) : GSTENT00013652001
Takifugu
sp. (Fugu) : SINFRUT00000152533
Equus
sp. (Horse) : XM_001488682
Pan
sp. (Chimpanzee) : XM_519740
Canis
sp. (Dog) : XM_539949
HIX0201319
HIT000336913
(
BC101548
)
(Protein kinase-like protein SgK196.)
genome : 42,958,669 - 42,978,043 (19,375)
query : 16 - 1,114 (1,099/1,114)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 0.987
InterPro :
IPR000719 : Protein kinase, catalytic domain
IPR001245 : Serine-threonine/tyrosine-protein kinase
IPR011009 : Protein kinase-like domain
GO :
0004672 : Molecular Function : protein kinase activity
0005524 : Molecular Function : ATP binding
0006468 : Biological Process : protein phosphorylation
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 24, pero 3, E.R. 2, lyso 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201319)
HIX0125073
HIT000462344
(
DQ595813
)
Representative transcript
(Non-protein coding transcript.)
genome : 42,980,390 - 42,980,418 (29)
query : 1 - 29 (29/30)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 0.967
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0125073)
HIX0208518
HIT000617151 (
ENST00000517759
)
Representative transcript
(Cor1/Xlr/Xmr family protein.)
genome : 42,981,138 - 42,981,540 (403)
query : 1 - 403 (403/403)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
InterPro :
IPR006888 : Cor1/Xlr/Xmr family
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21.5, cyto_nucl 12, extr 6, mito 3, extr_plas 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0208518)
HIX0020950
HIT000013095
(
AK056481
)
Representative transcript
(RNA-directed DNA polymerase (reverse transcriptase) family protein.)
genome : 42,981,893 - 42,985,905 (4,013)
query : 1 - 4,013 (4,013/4,013)
1 exon
identity = 0.999
3'(0.999)5'
coverage = 1.000
InterPro :
IPR015706 : RNA-directed DNA polymerase (reverse transcriptase)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 25.5, cyto_nucl 13.5, extr 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0020950)
HIX0152489
HIT000455173
(
DQ588642
)
Representative transcript
(Non-protein coding transcript.)
genome : 42,983,018 - 42,983,047 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0152489)
AC113191.13
42943490-42983489 F +
NCBI