bases per tick :
500
200
100
50
20
10
5
2
kb first site :
main :
All Human Genes
JIGSAW prediction
ESTs assembly
homology :
UCSC
CCDS
Pseudogene.org
Conserved regions (
Segmental duplication
P.troglodytes
P.abelii
M.mulatta
M.musculus
R.norvegicus
C.familiaris
E.caballus
B.taurus
M.domestica
G.gallus
D.rerio
O.latipes
T.nigroviridis
T.rubripes
)
gene prediction :
FGENESH
GenScan
HMMgene
tRNA
show... :
SNPs
ESTs(summary)
ESTs(detail)
CAGE tag(summary)
CAGE tag(detail)
sequence viewer :
( start, end )
( middle, total length )
= (
,
)
HIX0034312
HIT000083291
(
AY028700
)
Representative transcript
(Zeta-sarcoglycan.)
genome : 13,947,373 - 14,412,435 (465,063)
query : 1 - 1,479 (1,479/1,495)
7 exons
identity = 1.000
3'(1.000)5'
coverage = 1.000
InterPro :
IPR006875 : Sarcoglycan complex subunit protein
IPR027662 : Zeta-sarcoglycan
GO :
0016012 : Cellular Component : sarcoglycan complex
0016021 : Cellular Component : integral component of membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 20, extr_plas 12.5, extr 3, E.R. 3, cyto 2,
mito 2, lyso 2, cyto_mito 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0034312)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK136779
Canis
sp. (Dog) : ENSCAFT00000010944
Macaca
sp. (Macaque) : ENSMMUT00000009395
Monodelphis
sp. (Opossum) : ENSMODT00000024227
Oryzias
sp. (Medaka) : ENSORLT00000005151
Pongo
sp. (Orangutan) : ENSPPYT00000021418
Tetraodon
sp. (Tetraodon) : GSTENT00033521001
Takifugu
sp. (Fugu) : SINFRUT00000157359
Rattus
sp. (Rat) : XM_001066057
Equus
sp. (Horse) : XM_001488004
Danio
sp. (Zebrafish) : XM_001921806
Gallus
sp. (Chicken) : XM_429984
Pan
sp. (Chimpanzee) : XM_528075
HIX0034312
HIT000363358 (
ENST00000382080
)
(Zeta-sarcoglycan.)
genome : 13,947,373 - 15,095,848 (1,148,476)
query : 1 - 2,234 (2,234/2,234)
8 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 24, extr_plas 13.5, cyto 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0034312)
HIX0034312
HIT000212704 (
NM_139167
)
(Zeta-sarcoglycan.)
genome : 13,947,373 - 15,095,792 (1,148,420)
query : 1 - 2,178 (2,178/2,178)
8 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 24, extr_plas 13.5, cyto 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0034312)
HIX0034312
HIT000263610
(
BC069459
)
(Zeta-sarcoglycan.)
genome : 13,947,879 - 14,412,435 (464,557)
query : 1 - 973 (973/973)
7 exons
identity = 1.000
3'(1.000)5'
coverage = 1.000
InterPro :
IPR006875 : Sarcoglycan complex subunit protein
IPR027662 : Zeta-sarcoglycan
GO :
0016012 : Cellular Component : sarcoglycan complex
0016021 : Cellular Component : integral component of membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 20, extr_plas 12.5, extr 3, E.R. 3, cyto 2,
mito 2, lyso 2, cyto_mito 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0034312)
HIX0034312
HIT000388490
(
BC125037
)
(Zeta-sarcoglycan.)
genome : 13,947,883 - 14,412,435 (464,553)
query : 1 - 867 (867/867)
6 exons
identity = 1.000
3'(1.000)5'
coverage = 1.000
InterPro :
IPR006875 : Sarcoglycan complex subunit protein
IPR027662 : Zeta-sarcoglycan
GO :
0016012 : Cellular Component : sarcoglycan complex
0016021 : Cellular Component : integral component of membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 17, extr_plas 12, extr 5, E.R. 3, lyso 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0034312)
HIX0034312
HIT000519458 (
ENST00000421524
)
(Zeta-sarcoglycan.)
genome : 13,947,883 - 14,412,435 (464,553)
query : 1 - 867 (867/867)
6 exons
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 17, extr_plas 12, extr 5, E.R. 3, lyso 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0034312)
HIX0034312
HIT000255022
(
AY502063
)
(Zeta-sarcoglycan.)
genome : 13,947,952 - 14,412,437 (464,486)
query : 38 - 939 (902/939)
7 exons
identity = 1.000
3'(1.000)5'
coverage = 0.961
InterPro :
IPR006875 : Sarcoglycan complex subunit protein
IPR027662 : Zeta-sarcoglycan
GO :
0016012 : Cellular Component : sarcoglycan complex
0016021 : Cellular Component : integral component of membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 24, extr_plas 13.5, cyto 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0034312)
HIX0208473
HIT000615629 (
ENST00000516226
)
(Non-protein coding transcript.)
genome : 14,345,285 - 14,345,388 (104)
query : 1 - 104 (104/104)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0208473)
HIX0218302
HIT000692512 (
ENST00000580600
)
(Conserved hypothetical protein.)
genome : 14,372,250 - 14,372,374 (125)
query : 1 - 125 (125/125)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0218302)
HIX0209045
HIT000629347 (
ENST00000530195
)
(Non-protein coding transcript.)
genome : 14,547,891 - 14,548,128 (238)
query : 1 - 238 (238/238)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0209045)
HIX0152379
HIT000343886 (
ENST00000362257
)
(Non-protein coding transcript.)
genome : 14,710,947 - 14,711,019 (73)
query : 1 - 73 (73/73)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0152379)
HIX0152379
HIT000658137 (
NR_029875
)
(Non-protein coding transcript.)
genome : 14,710,947 - 14,711,019 (73)
query : 1 - 73 (73/73)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0152379)
HIX0007328
HIT000011355
(
AK054741
)
Representative transcript
(Conserved hypothetical protein.)
genome : 14,735,721 - 14,737,679 (1,959)
query : 1 - 1,960 (1,960/1,960)
1 exon
identity = 0.990
3'(0.990)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20.5, cyto_nucl 14.5, mito 6, nucl 5.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007328)
HIX0007328
HIT000632060 (
ENST00000532973
)
(Conserved hypothetical protein.)
genome : 14,736,566 - 14,737,328 (763)
query : 1 - 312 (312/312)
2 exons
identity = 0.990
3'(1.000;0.956)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 23, extr 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007328)
HIX0208431
HIT000606873 (
ENST00000506833
)
(DNA polymerase beta, thumb domain containing protein.)
genome : 15,182,805 - 15,183,078 (274)
query : 1 - 274 (274/274)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, mito 6, nucl 4.5, cyto_nucl 3.5,
mito_pero 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0208431)
HIX0218133
HIT000603497 (
ENST00000503191
)
(Oligosaccharyl transferase complex, subunit OST3/OST6 family protein.)
genome : 15,274,724 - 15,531,345 (256,622)
query : 1 - 731 (731/731)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 19, plas 7, mito 2, pero 2, mito_pero 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0218133)
HIX0218133
HIT000609249 (
ENST00000509380
)
(Oligosaccharyl transferase complex, subunit OST3/OST6 family protein.)
genome : 15,397,790 - 15,591,154 (193,365)
query : 1 - 1,266 (1,266/1,266)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 21, E.R. 4, golg 3, extr 2, E.R._mito 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0218133)
HIX0218133
HIT000607396 (
ENST00000507400
)
(Oligosaccharyl transferase complex, subunit OST3/OST6 family protein.)
genome : 15,480,586 - 15,531,345 (50,760)
query : 65 - 727 (663/727)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 0.912
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 19, E.R. 6, mito 3, E.R._golg 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0218133)
HIX0218133
HIT000609058 (
ENST00000509177
)
(Conserved hypothetical protein.)
genome : 15,480,587 - 15,508,526 (27,940)
query : 1 - 493 (493/493)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 11.5, cyto 10.5, nucl 9.5, extr 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0218133)
HIX0208430
HIT000606813 (
ENST00000506768
)
(Conserved hypothetical protein.)
genome : 15,546,423 - 15,547,071 (649)
query : 1 - 649 (649/649)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 20, cyto 11
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0208430)
HIX0218071
HIT000607313 (
ENST00000507316
)
(Oligosaccharyl transferase complex, subunit OST3/OST6 family protein.)
genome : 15,600,953 - 15,615,786 (14,834)
query : 1 - 573 (573/573)
4 exons
identity = 0.997
5'(1.000;1.000;0.971;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 16, cyto 5, plas 4, cyto_nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0218071)
HIX0218071
HIT000611065 (
ENST00000511342
)
(Oligosaccharyl transferase complex, subunit OST3/OST6 family protein.)
genome : 15,601,039 - 15,606,355 (5,317)
query : 1 - 555 (555/555)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 11, cyto 7, E.R._mito 5.5, mito 5, mito_pero 5,
plas 4, cyto_nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0218071)
HIX0218071
HIT000255510
(
AY562999
)
(Tumor suppressor candidate 3; Magnesium uptake/transporter TUSC3; Protein N33; Precursor;)
genome : 15,601,082 - 15,621,969 (20,888)
query : 1 - 391 (391/391)
3 exons
identity = 0.995
5'(1.000;1.000;0.992)3'
coverage = 1.000
InterPro :
IPR006844 : Magnesium transporter protein 1
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0218071)
HIX0218071
HIT000255509
(
AY562998
)
Representative transcript
(Tumor suppressor candidate 3; Magnesium uptake/transporter TUSC3; Protein N33; Precursor;)
genome : 15,601,082 - 15,621,968 (20,887)
query : 1 - 453 (453/453)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR006844 : Magnesium transporter protein 1
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 28, E.R. 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0218071)
HIX0218071
HIT000255163
(
AY530159
)
(Non-protein coding transcript.)
genome : 15,601,087 - 15,621,927 (20,841)
query : 1 - 251 (251/251)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0218071)
HIX0007330
HIT000009423
(
AK026149
)
Representative transcript
(Conserved hypothetical protein.)
genome : 15,615,955 - 15,618,176 (2,222)
query : 1 - 2,222 (2,222/2,239)
1 exon
identity = 0.997
5'(0.997)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 14, plas 11.5, extr_plas 7, mito_pero 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007330)
HIX0218071
HIT000055652
(
BX641112
)
(Conserved hypothetical protein.)
genome : 15,618,485 - 15,622,157 (3,673)
query : 1 - 3,676 (3,676/3,694)
1 exon
identity = 0.999
5'(0.999)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 20, extr 8, pero 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0218071)
HIX0007331
HIT000005359
(
AK022085
)
Representative transcript
(Hypothetical short protein.)
genome : 15,633,532 - 15,635,608 (2,077)
query : 1 - 2,076 (2,076/2,076)
1 exon
identity = 0.998
5'(0.998)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 18, cyto_nucl 6, mito 5, nucl 4.5, cyto 4.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007331)
HIX0208418
HIT000603071 (
ENST00000502740
)
(Protein phosphatase 2C (PP2C)-like domain containing protein.)
genome : 15,663,658 - 15,664,792 (1,135)
query : 1 - 1,135 (1,135/1,135)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15.5, extr 12, cyto_nucl 9, mito 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0208418)
HIX0007329
HIT000203339 (
NM_006765
)
(Oligosaccharyl transferase complex, subunit OST3/OST6 family protein.)
genome : 15,397,596 - 15,624,158 (226,563)
query : 1 - 3,884 (3,884/3,888)
11 exons
identity = 0.998
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.942;0.998)3'
coverage = 0.999
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 30
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007329)
HIX0007329
HIT000318040 (
NM_178234
)
(Oligosaccharyl transferase complex, subunit OST3/OST6 family protein.)
genome : 15,397,596 - 15,624,158 (226,563)
query : 1 - 3,819 (3,819/3,823)
10 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 0.999
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 28, E.R. 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007329)
HIX0007329
HIT000034905
(
BC010370
)
(Tumor suppressor candidate 3; Magnesium uptake/transporter TUSC3; Protein N33; Precursor;)
genome : 15,397,732 - 15,621,994 (224,263)
query : 5 - 1,523 (1,519/1,550)
10 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 0.997
InterPro :
IPR006844 : Magnesium transporter protein 1
IPR012336 : Thioredoxin-like fold
IPR013766 : Thioredoxin domain
IPR021149 : Oligosaccharyl transferase complex, subunit OST3/OST6
GO :
0045454 : Biological Process : cell redox homeostasis
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 28, E.R. 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007329)
HIX0007329
HIT000363298 (
ENST00000382020
)
(Oligosaccharyl transferase complex, subunit OST3/OST6 family protein.)
genome : 15,397,732 - 15,624,158 (226,427)
query : 1 - 3,683 (3,683/3,683)
10 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 28, E.R. 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007329)
HIX0007329
HIT000615264 (
ENST00000515859
)
(Oligosaccharyl transferase complex, subunit OST3/OST6 family protein.)
genome : 15,397,736 - 15,622,170 (224,435)
query : 1 - 1,627 (1,627/1,627)
9 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 19, E.R. 5, golg 3, E.R._mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007329)
HIX0007329
HIT000606844 (
ENST00000506802
)
(Oligosaccharyl transferase complex, subunit OST3/OST6 family protein.)
genome : 15,397,742 - 15,622,122 (224,381)
query : 1 - 1,546 (1,546/1,546)
9 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 22, E.R. 4, golg 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007329)
HIX0007329
HIT000219805
(
U42349
)
Representative transcript
(Tumor suppressor candidate 3; Magnesium uptake/transporter TUSC3; Protein N33; Precursor;)
genome : 15,397,792 - 15,621,803 (224,012)
query : 10 - 1,342 (1,333/1,342)
11 exons
identity = 0.995
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.957;0.957)3'
coverage = 0.993
InterPro :
IPR006844 : Magnesium transporter protein 1
IPR012336 : Thioredoxin-like fold
IPR013766 : Thioredoxin domain
IPR021149 : Oligosaccharyl transferase complex, subunit OST3/OST6
GO :
0045454 : Biological Process : cell redox homeostasis
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 30
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007329)
HIX0007329
HIT000610590 (
ENST00000510836
)
(Oligosaccharyl transferase complex, subunit OST3/OST6 family protein.)
genome : 15,397,788 - 15,622,138 (224,351)
query : 1 - 1,452 (1,452/1,452)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 19, E.R. 5, golg 3, E.R._mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007329)
HIX0007329
HIT000604000 (
ENST00000503731
)
(Oligosaccharyl transferase complex, subunit OST3/OST6 family protein.)
genome : 15,397,792 - 15,621,968 (224,177)
query : 1 - 1,498 (1,498/1,498)
11 exons
identity = 0.995
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.942;0.984)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 30
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007329)
HIX0007329
HIT000266770
(
BT020002
)
(Oligosaccharyl transferase complex, subunit OST3/OST6 family protein.)
genome : 15,397,940 - 15,605,974 (208,035)
query : 1 - 1,028 (1,028/1,047)
9 exons
identity = 0.999
5'(1.000;1.000;1.000;0.993;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 0.982
InterPro :
IPR006844 : Magnesium transporter protein 1
IPR012336 : Thioredoxin-like fold
IPR013766 : Thioredoxin domain
IPR021149 : Oligosaccharyl transferase complex, subunit OST3/OST6
GO :
0045454 : Biological Process : cell redox homeostasis
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 30
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007329)
HIX0007329
HIT000611480 (
ENST00000511783
)
(Oligosaccharyl transferase complex, subunit OST3/OST6 family protein.)
genome : 15,480,589 - 15,615,786 (135,198)
query : 1 - 1,203 (1,203/1,203)
10 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007329)
HIX0007329
HIT000608375 (
ENST00000508446
)
(Oligosaccharyl transferase complex, subunit OST3/OST6 family protein.)
genome : 15,531,272 - 15,621,927 (90,656)
query : 1 - 457 (457/457)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 21, cyto 6.5, cyto_nucl 6.5, nucl 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007329)
AC009898.6
14200001-14225207 F +
NCBI
AC107965.4
14225208-14272203 F -
NCBI
AC021760.9
14272204-14416783 F +
NCBI
AC040926.5
14416784-14610213 F +
NCBI
AC084838.7
14610214-14753319 F -
NCBI
AC106857.8
14753320-14906192 F +
NCBI
AC019215.4
14906193-15084238 F +
NCBI
AC020992.10
15084239-15147232 F +
NCBI
AC103851.2
15147233-15246266 F +
NCBI
AC091559.7
15246267-15401341 F +
NCBI
AC010656.7
15401342-15538933 F -
NCBI
AC100850.2
15538934-15586432 F -
NCBI
AC019292.10
15586433-15764706 F +
NCBI
AC018437.10
15764707-15800000 F +
NCBI