Clickable map CGI

HIX0006647
HIT000493782 ( AK299158 )
  (Similar to Synaptobrevin homolog YKT6; EC=2.3.1.-; Precursor;)
  genome : 44,240,567 - 44,252,488 (11,922)
  query : 1 - 1,268 (1,268/1,268)
  6 exons
  identity = 0.998
  5'(1.000;1.000;1.000;1.000;1.000;0.995)3'
  coverage = 1.000
  InterPro :
    IPR010908 : Longin
    IPR011012 : Longin-like
  GO :
    0006810 : Biological Process : transport
    0016021 : Cellular Component : integral to membrane
    0016192 : Biological Process : vesicle-mediated transport
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    cyto 16, extr 6, nucl 5, mito 4
  H-InvDB(Transcript view)
  H-InvDB(Locus view)
  DDBJ
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0006647)

HIX0006647
HIT000599449 ( ENST00000496112 )
  (Similar to Synaptobrevin homolog YKT6; EC=2.3.1.-; Precursor;)
  genome : 44,240,567 - 44,252,488 (11,922)
  query : 1 - 1,270 (1,270/1,270)
  6 exons
  identity = 1.000
  5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
  coverage = 1.000
  InterPro :
    IPR010908 : Longin
    IPR011012 : Longin-like
  GO :
    0006810 : Biological Process : transport
    0016021 : Cellular Component : integral to membrane
    0016192 : Biological Process : vesicle-mediated transport
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    cyto 16, extr 6, nucl 5, mito 4
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0006647)

HIX0006647
HIT000203146 ( NM_006555 )
  (Synaptobrevin homolog YKT6.)
  genome : 44,240,578 - 44,253,893 (13,316)
  query : 1 - 2,766 (2,766/2,783)
  7 exons
  identity = 1.000
  5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
  coverage = 1.000
  InterPro :
    IPR001388 : Synaptobrevin
    IPR010908 : Longin
    IPR011012 : Longin-like
  GO :
    0006810 : Biological Process : transport
    0016021 : Cellular Component : integral to membrane
    0016192 : Biological Process : vesicle-mediated transport
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    cyto 17, nucl 6, extr 5, mito 3
  RefSeq
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0006647)

HIX0006647
HIT000103781 ( ENST00000223369 )
  (Synaptobrevin homolog YKT6.)
  genome : 44,240,578 - 44,253,892 (13,315)
  query : 1 - 2,765 (2,765/2,765)
  7 exons
  identity = 1.000
  5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    extr 21, cyto 7.5, cyto_nucl 6
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0006647)

HIX0006647
HIT000519555 ( ENST00000421621 )
  (Similar to Synaptobrevin homolog YKT6; EC=2.3.1.-; Precursor;)
  genome : 44,240,578 - 44,253,892 (13,315)
  query : 1 - 2,663 (2,663/2,663)
  6 exons
  identity = 1.000
  5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
  coverage = 1.000
  InterPro :
    IPR010908 : Longin
    IPR011012 : Longin-like
  GO :
    0006810 : Biological Process : transport
    0016021 : Cellular Component : integral to membrane
    0016192 : Biological Process : vesicle-mediated transport
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    cyto 16, extr 6, nucl 5, mito 4
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0006647)

HIX0006647
HIT000431488 ( AK312622 )
  (Synaptobrevin homolog YKT6.)
  genome : 44,240,589 - 44,251,881 (11,293)
  query : 1 - 743 (743/743)
  7 exons
  identity = 1.000
  5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
  coverage = 1.000
  InterPro :
    IPR001388 : Synaptobrevin
    IPR010908 : Longin
    IPR011012 : Longin-like
  GO :
    0006810 : Biological Process : transport
    0016021 : Cellular Component : integral to membrane
    0016192 : Biological Process : vesicle-mediated transport
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    cyto 17, nucl 6, extr 5, mito 3
  H-InvDB(Transcript view)
  H-InvDB(Locus view)
  DDBJ
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0006647)

HIX0006647
HIT000545057 ( ENST00000447123 )
  (Synaptobrevin homolog YKT6; EC=2.3.1.-; Precursor;)
  genome : 44,240,611 - 44,252,194 (11,584)
  query : 1 - 1,085 (1,085/1,085)
  8 exons
  identity = 1.000
  5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
      1.000)3'
  coverage = 1.000
  InterPro :
    IPR001388 : Synaptobrevin
    IPR010908 : Longin
    IPR011012 : Longin-like
  GO :
    0006810 : Biological Process : transport
    0016021 : Cellular Component : integral to membrane
    0016192 : Biological Process : vesicle-mediated transport
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    cyto 21, nucl 7, extr 3
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0006647)

HIX0006647
HIT000331268 ( AK223488 )
  (Synaptobrevin homolog YKT6; EC=2.3.1.-; Precursor;)
  genome : 44,240,621 - 44,252,276 (11,656)
  query : 1 - 1,106 (1,106/1,106)
  7 exons
  identity = 0.999
  5'(1.000;1.000;1.000;1.000;0.985;1.000;1.000)3'
  coverage = 1.000
  InterPro :
    IPR001388 : Synaptobrevin
    IPR010908 : Longin
    IPR011012 : Longin-like
  GO :
    0006810 : Biological Process : transport
    0016021 : Cellular Component : integral to membrane
    0016192 : Biological Process : vesicle-mediated transport
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    cyto 17, nucl 6, extr 5, mito 3
  H-InvDB(Transcript view)
  H-InvDB(Locus view)
  DDBJ
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0006647)

HIX0006647
HIT000222787 ( U95735 )
  (Synaptobrevin homolog YKT6.)
  genome : 44,240,675 - 44,251,959 (11,285)
  query : 1 - 733 (733/741)
  7 exons
  identity = 0.995
  5'(0.982;1.000;1.000;1.000;1.000;1.000;0.991)3'
  coverage = 0.989
  InterPro :
    IPR001388 : Synaptobrevin
    IPR010908 : Longin
    IPR011012 : Longin-like
  GO :
    0006810 : Biological Process : transport
    0016021 : Cellular Component : integral to membrane
    0016192 : Biological Process : vesicle-mediated transport
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    cyto 17, nucl 6, extr 5, mito 3
  H-InvDB(Transcript view)
  H-InvDB(Locus view)
  DDBJ
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0006647)

HIX0006647
HIT000068300 ( AF091079 )
  (Similar to Synaptobrevin homolog YKT6; EC=2.3.1.-; Precursor;)
  genome : 44,240,675 - 44,250,724 (10,050)
  query : 1 - 622 (622/633)
  6 exons
  identity = 1.000
  5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
  coverage = 0.995
  InterPro :
    IPR001388 : Synaptobrevin
    IPR010908 : Longin
    IPR011012 : Longin-like
  GO :
    0006810 : Biological Process : transport
    0016021 : Cellular Component : integral to membrane
    0016192 : Biological Process : vesicle-mediated transport
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    cyto 22, nucl 7
  H-InvDB(Transcript view)
  H-InvDB(Locus view)
  DDBJ
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0006647)

HIX0006647
HIT000099998 ( BT007078 )
  (Synaptobrevin homolog YKT6.)
  genome : 44,240,735 - 44,251,879 (11,145)
  query : 1 - 595 (595/597)
  7 exons
  identity = 1.000
  5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
  coverage = 0.997
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    cyto 17, nucl 6, extr 5, mito 3
  H-InvDB(Transcript view)
  H-InvDB(Locus view)
  DDBJ
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0006647)

HIX0006647
HIT000267839 ( CR456989 )
  (Synaptobrevin homolog YKT6; EC=2.3.1.-; Precursor;)
  genome : 44,240,735 - 44,251,877 (11,143)
  query : 1 - 593 (593/597)
  7 exons
  identity = 1.000
  5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
  coverage = 0.993
  InterPro :
    IPR001388 : Synaptobrevin
    IPR010908 : Longin
    IPR011012 : Longin-like
  GO :
    0006810 : Biological Process : transport
    0016021 : Cellular Component : integral to membrane
    0016192 : Biological Process : vesicle-mediated transport
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    cyto 18, nucl 7, extr 4
  H-InvDB(Transcript view)
  H-InvDB(Locus view)
  DDBJ
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0006647)

HIX0006647
HIT000487530 ( AB451317 )
  (Synaptobrevin homolog YKT6; EC=2.3.1.-; Precursor;)
  genome : 44,240,735 - 44,251,879 (11,145)
  query : 1 - 595 (595/597)
  7 exons
  identity = 0.998
  5'(0.990;1.000;1.000;1.000;1.000;1.000;1.000)3'
  coverage = 0.997
  InterPro :
    IPR001388 : Synaptobrevin
    IPR010908 : Longin
    IPR011012 : Longin-like
  GO :
    0006810 : Biological Process : transport
    0016021 : Cellular Component : integral to membrane
    0016192 : Biological Process : vesicle-mediated transport
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    cyto 18, nucl 6, extr 5
  H-InvDB(Transcript view)
  H-InvDB(Locus view)
  DDBJ
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0006647)

HIX0006647
HIT000268877 ( CR542008 )
  (Synaptobrevin homolog YKT6; EC=2.3.1.-; Precursor;)
  genome : 44,240,735 - 44,251,878 (11,144)
  query : 1 - 594 (594/594)
  7 exons
  identity = 0.997
  5'(1.000;0.988;1.000;1.000;1.000;0.990;1.000)3'
  coverage = 1.000
  InterPro :
    IPR001388 : Synaptobrevin
    IPR010908 : Longin
    IPR011012 : Longin-like
  GO :
    0006810 : Biological Process : transport
    0016021 : Cellular Component : integral to membrane
    0016192 : Biological Process : vesicle-mediated transport
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    cyto 17, nucl 6, extr 5, mito 3
  H-InvDB(Transcript view)
  H-InvDB(Locus view)
  DDBJ
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0006647)

HIX0006647
HIT000487660 ( AB451447 )
  (Synaptobrevin homolog YKT6; EC=2.3.1.-; Precursor;)
  genome : 44,240,735 - 44,251,878 (11,144)
  query : 1 - 594 (594/594)
  7 exons
  identity = 0.998
  5'(0.990;1.000;1.000;1.000;1.000;1.000;1.000)3'
  coverage = 1.000
  InterPro :
    IPR001388 : Synaptobrevin
    IPR010908 : Longin
    IPR011012 : Longin-like
  GO :
    0006810 : Biological Process : transport
    0016021 : Cellular Component : integral to membrane
    0016192 : Biological Process : vesicle-mediated transport
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    cyto 18, nucl 6, extr 5
  H-InvDB(Transcript view)
  H-InvDB(Locus view)
  DDBJ
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0006647)

HIX0006647
HIT000567825 ( ENST00000463014 )
  (Similar to Synaptobrevin homolog YKT6; EC=2.3.1.-; Precursor;)
  genome : 44,246,932 - 44,248,179 (1,248)
  query : 1 - 608 (608/608)
  2 exons
  identity = 1.000
  5'(1.000;1.000)3'
  coverage = 1.000
  InterPro :
    IPR010908 : Longin
    IPR011012 : Longin-like
  GO :
    0006810 : Biological Process : transport
    0016021 : Cellular Component : integral to membrane
    0016192 : Biological Process : vesicle-mediated transport
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    cyto 16.5, cyto_nucl 11.5, extr 7, nucl 5.5
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0006647)

HIX0006647
HIT000582519 ( ENST00000478411 )
  (Similar to Synaptobrevin homolog YKT6; EC=2.3.1.-; Precursor;)
  genome : 44,247,733 - 44,248,306 (574)
  query : 1 - 366 (366/366)
  2 exons
  identity = 1.000
  5'(1.000;1.000)3'
  coverage = 1.000
  SOSUI :
    MEMBRANE PROTEIN
  PSORT :
    extr 16, cyto 10.5, cyto_nucl 8.5, nucl 3.5
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0006647)

HIX0006647
HIT000522798 ( ENST00000424864 )
  (Similar to Synaptobrevin homolog YKT6; EC=2.3.1.-; Precursor;)
  genome : 44,247,735 - 44,252,212 (4,478)
  query : 1 - 673 (673/673)
  5 exons
  identity = 1.000
  5'(1.000;1.000;1.000;1.000;1.000)3'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    extr 14, mito 13, cyto 3.5, cyto_nucl 3
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0006647)

HIX0006647
HIT000082053 ( AK075018 )
  (Similar to Synaptobrevin homolog YKT6; EC=2.3.1.-; Precursor;)
  genome : 44,250,657 - 44,253,891 (3,235)
  query : 1 - 1,999 (1,999/1,999)
  3 exons
  identity = 0.999
  5'(1.000;0.998;1.000)3'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    extr 31
  H-InvDB(Transcript view)
  H-InvDB(Locus view)
  DDBJ
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0006647)

HIX0033584
HIT000022064 ( AK097209 )
  Representative transcript
  (Conserved hypothetical protein.)
  genome : 44,251,125 - 44,253,892 (2,768)
  query : 1 - 2,766 (2,766/2,766)
  1 exon
  identity = 0.998
  3'(0.998)5'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    cyto 13.5, cyto_nucl 12.5, nucl 10.5, extr 6
  H-InvDB(Transcript view)
  H-InvDB(Locus view)
  DDBJ
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0033584)

HIX0033584
HIT000296242 ( CR617047 )
  (Hypothetical protein.)
  genome : 44,252,344 - 44,253,876 (1,533)
  query : 1 - 1,533 (1,533/1,533)
  1 exon
  identity = 1.000
  3'(1.000)5'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    cyto 13.5, cyto_nucl 12.5, nucl 10.5, extr 6
  H-InvDB(Transcript view)
  H-InvDB(Locus view)
  DDBJ
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0033584)

bases per tick : kb first site :
main : All Human Genes JIGSAW prediction ESTs assembly
homology : UCSC CCDS Pseudogene.org Conserved regions ( Segmental duplication P.troglodytes P.abelii M.mulatta M.musculus R.norvegicus C.familiaris E.caballus B.taurus M.domestica G.gallus D.rerio O.latipes T.nigroviridis T.rubripes )
gene prediction : FGENESH GenScan HMMgene tRNA
show... : SNPs ESTs(summary) ESTs(detail) CAGE tag(summary) CAGE tag(detail)
sequence viewer : = ( , )