bases per tick :
500
200
100
50
20
10
5
2
kb first site :
main :
All Human Genes
JIGSAW prediction
ESTs assembly
homology :
UCSC
CCDS
Pseudogene.org
Conserved regions (
Segmental duplication
P.troglodytes
P.abelii
M.mulatta
M.musculus
R.norvegicus
C.familiaris
E.caballus
B.taurus
M.domestica
G.gallus
D.rerio
O.latipes
T.nigroviridis
T.rubripes
)
gene prediction :
FGENESH
GenScan
HMMgene
tRNA
show... :
SNPs
ESTs(summary)
ESTs(detail)
CAGE tag(summary)
CAGE tag(detail)
sequence viewer :
( start, end )
( middle, total length )
= (
,
)
HIX0018021
HIT000039992
(
BC025726
)
(Similar to Potassium channel subfamily K member 17; 2P domain potassium channel Talk-2; Acid-sensitive potassium channel protein TASK-4; TWIK-related acid-sensitive K(+) channel 4; TWIK-related alkaline pH-activated K(+) channel 2; TALK-2;)
genome : 39,266,777 - 39,282,183 (15,407)
query : 1 - 1,512 (1,512/1,577)
5 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;0.997)5'
coverage = 1.000
InterPro :
IPR003092 : Potassium channel, two pore, TASK family
IPR003280 : Potassium channel, two pore-domain
IPR013099 : Ion transport 2
IPR022306 : Potassium channel, two pore, TASK/TWIK
GO :
0005267 : Molecular Function : potassium channel activity
0006813 : Biological Process : potassium ion transport
0016020 : Cellular Component : membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 28, extr 1, E.R. 1, lyso 1, golg 1, E.R._golg 1
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0018021)
HIX0018021
HIT000560049 (
NM_001135111
)
(Potassium channel subfamily K member 17 isoform 2.)
genome : 39,266,777 - 39,282,237 (15,461)
query : 1 - 1,717 (1,717/1,741)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR003280 : Potassium channel, two pore-domain
IPR013099 : Ion transport 2
IPR022306 : Potassium channel, two pore, TASK/TWIK
GO :
0005267 : Molecular Function : potassium channel activity
0006813 : Biological Process : potassium ion transport
0016020 : Cellular Component : membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 14, extr 13, E.R. 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0018021)
HIX0018021
HIT000210195 (
NM_031460
)
(Potassium channel subfamily K member 17 isoform 1.)
genome : 39,266,777 - 39,282,236 (15,460)
query : 1 - 1,565 (1,565/1,589)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR003092 : Potassium channel, two pore, TASK family
IPR003280 : Potassium channel, two pore-domain
IPR013099 : Ion transport 2
IPR022306 : Potassium channel, two pore, TASK/TWIK
GO :
0005267 : Molecular Function : potassium channel activity
0006813 : Biological Process : potassium ion transport
0016020 : Cellular Component : membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 28, extr 1, E.R. 1, lyso 1, golg 1, E.R._golg 1
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0018021)
HIX0018021
HIT000252897
(
AY358853
)
(Potassium channel subfamily K member 17 isoform 1.)
genome : 39,266,780 - 39,282,187 (15,408)
query : 1 - 1,513 (1,513/1,540)
5 exons
identity = 0.999
3'(0.999;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR003092 : Potassium channel, two pore, TASK family
IPR003280 : Potassium channel, two pore-domain
IPR013099 : Ion transport 2
IPR022306 : Potassium channel, two pore, TASK/TWIK
GO :
0005267 : Molecular Function : potassium channel activity
0006813 : Biological Process : potassium ion transport
0016020 : Cellular Component : membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 28, extr 1, E.R. 1, lyso 1, golg 1, E.R._golg 1
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0018021)
HIX0018021
HIT000077989
(
AF339912
)
(Similar to Potassium channel subfamily K member 17; 2P domain potassium channel Talk-2; Acid-sensitive potassium channel protein TASK-4; TWIK-related acid-sensitive K(+) channel 4; TWIK-related alkaline pH-activated K(+) channel 2; TALK-2;)
genome : 39,266,777 - 39,282,198 (15,422)
query : 5 - 1,520 (1,516/1,531)
5 exons
identity = 0.991
3'(0.984;1.000;1.000;1.000;0.994)5'
coverage = 0.997
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 17, E.R. 9.5, E.R._golg 5.5, extr 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0018021)
HIX0018021
HIT000551347 (
ENST00000453413
)
(Potassium channel subfamily K member 17 isoform 2.)
genome : 39,266,778 - 39,282,237 (15,460)
query : 1 - 1,716 (1,716/1,716)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR003280 : Potassium channel, two pore-domain
IPR013099 : Ion transport 2
IPR022306 : Potassium channel, two pore, TASK/TWIK
GO :
0005267 : Molecular Function : potassium channel activity
0006813 : Biological Process : potassium ion transport
0016020 : Cellular Component : membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 14, extr 13, E.R. 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0018021)
HIX0018021
HIT000354511 (
ENST00000373231
)
(Potassium channel subfamily K member 17 isoform 1.)
genome : 39,266,778 - 39,282,236 (15,459)
query : 1 - 1,564 (1,564/1,564)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR003092 : Potassium channel, two pore, TASK family
IPR003280 : Potassium channel, two pore-domain
IPR013099 : Ion transport 2
IPR022306 : Potassium channel, two pore, TASK/TWIK
GO :
0005267 : Molecular Function : potassium channel activity
0006813 : Biological Process : potassium ion transport
0016020 : Cellular Component : membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 28, extr 1, E.R. 1, lyso 1, golg 1, E.R._golg 1
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0018021)
HIX0018021
HIT000293079
(
CR613884
)
Representative transcript
(Potassium channel subfamily K member 17 isoform 2.)
genome : 39,266,788 - 39,282,237 (15,450)
query : 1 - 1,706 (1,706/1,706)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR003280 : Potassium channel, two pore-domain
IPR013099 : Ion transport 2
IPR022306 : Potassium channel, two pore, TASK/TWIK
GO :
0005267 : Molecular Function : potassium channel activity
0006813 : Biological Process : potassium ion transport
0016020 : Cellular Component : membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 14, extr 13, E.R. 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0018021)
Ortholog candidate ( ->
Evola
)
Bos
sp. (Cow) : AF479760
Rattus
sp. (Rat) : BC129068
Canis
sp. (Dog) : ENSCAFT00000002429
Equus
sp. (Horse) : ENSECAT00000026464
Oryzias
sp. (Medaka) : ENSORLT00000022724
Pongo
sp. (Orangutan) : ENSPPYT00000019277
Tetraodon
sp. (Tetraodon) : GSTENT00010536001
Takifugu
sp. (Fugu) : SINFRUT00000165955
Macaca
sp. (Macaque) : XM_001117122
Pan
sp. (Chimpanzee) : XM_001173849
Monodelphis
sp. (Opossum) : XM_001379407
Gallus
sp. (Chicken) : XM_419477
HIX0018021
HIT000302166
(
CR622971
)
(Potassium channel subfamily K member 17 isoform 1.)
genome : 39,266,793 - 39,282,178 (15,386)
query : 1 - 1,491 (1,491/1,491)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR003092 : Potassium channel, two pore, TASK family
IPR003280 : Potassium channel, two pore-domain
IPR013099 : Ion transport 2
IPR022306 : Potassium channel, two pore, TASK/TWIK
GO :
0005267 : Molecular Function : potassium channel activity
0006813 : Biological Process : potassium ion transport
0016020 : Cellular Component : membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 28, extr 1, E.R. 1, lyso 1, golg 1, E.R._golg 1
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0018021)
HIX0018021
HIT000305824
(
CR626629
)
(Potassium channel subfamily K member 17 isoform 1.)
genome : 39,266,810 - 39,282,197 (15,388)
query : 1 - 1,493 (1,493/1,493)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR003092 : Potassium channel, two pore, TASK family
IPR003280 : Potassium channel, two pore-domain
IPR013099 : Ion transport 2
IPR022306 : Potassium channel, two pore, TASK/TWIK
GO :
0005267 : Molecular Function : potassium channel activity
0006813 : Biological Process : potassium ion transport
0016020 : Cellular Component : membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 28, extr 1, E.R. 1, lyso 1, golg 1, E.R._golg 1
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0018021)
HIX0018021
HIT000558387
(
EU978944
)
(Similar to Potassium channel subfamily K member 17; 2P domain potassium channel Talk-2; Acid-sensitive potassium channel protein TASK-4; TWIK-related acid-sensitive K(+) channel 4; TWIK-related alkaline pH-activated K(+) channel 2; TALK-2;)
genome : 39,266,991 - 39,282,143 (15,153)
query : 1 - 1,258 (1,258/1,258)
5 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;0.996)5'
coverage = 1.000
InterPro :
IPR003092 : Potassium channel, two pore, TASK family
IPR003280 : Potassium channel, two pore-domain
IPR013099 : Ion transport 2
IPR022306 : Potassium channel, two pore, TASK/TWIK
GO :
0005267 : Molecular Function : potassium channel activity
0006813 : Biological Process : potassium ion transport
0016020 : Cellular Component : membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 28, extr 1, E.R. 1, lyso 1, golg 1, E.R._golg 1
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0018021)
HIX0018021
HIT000434139
(
AK315273
)
(Potassium channel subfamily K member 17; 2P domain potassium channel Talk-2; Acid-sensitive potassium channel protein TASK-4; TWIK-related acid-sensitive K(+) channel 4; TWIK-related alkaline pH-activated K(+) channel 2; TALK-2;)
genome : 39,267,203 - 39,282,227 (15,025)
query : 1 - 1,130 (1,130/1,130)
5 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;0.997)5'
coverage = 1.000
InterPro :
IPR003092 : Potassium channel, two pore, TASK family
IPR003280 : Potassium channel, two pore-domain
IPR013099 : Ion transport 2
IPR022306 : Potassium channel, two pore, TASK/TWIK
GO :
0005267 : Molecular Function : potassium channel activity
0006813 : Biological Process : potassium ion transport
0016020 : Cellular Component : membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 28, extr 1, E.R. 1, lyso 1, golg 1, E.R._golg 1
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0018021)
HIX0018021
HIT000078326
(
AF358910
)
(Potassium channel subfamily K member 17 isoform 1.)
genome : 39,267,203 - 39,282,096 (14,894)
query : 1 - 999 (999/999)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 28, extr 1, E.R. 1, lyso 1, golg 1, E.R._golg 1
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0018021)
HIX0018021
HIT000429448
(
AK310582
)
(Similar to Potassium channel subfamily K member 17; 2P domain potassium channel Talk-2; Acid-sensitive potassium channel protein TASK-4; TWIK-related acid-sensitive K(+) channel 4; TWIK-related alkaline pH-activated K(+) channel 2; TALK-2;)
genome : 39,271,755 - 39,282,201 (10,447)
query : 1 - 1,134 (1,134/1,134)
3 exons
identity = 0.999
3'(1.000;1.000;0.997)5'
coverage = 1.000
InterPro :
IPR013099 : Ion transport 2
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 14, extr 14, extr_plas 14
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0018021)
HIX0018021
HIT000604139 (
ENST00000503878
)
(Similar to Potassium channel subfamily K member 17; 2P domain potassium channel Talk-2; Acid-sensitive potassium channel protein TASK-4; TWIK-related acid-sensitive K(+) channel 4; TWIK-related alkaline pH-activated K(+) channel 2; TALK-2;)
genome : 39,271,755 - 39,282,201 (10,447)
query : 1 - 1,134 (1,134/1,134)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR013099 : Ion transport 2
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 17, plas 10, E.R. 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0018021)
HIX0032796
HIT000210398 (
NM_032115
)
(Potassium channel subfamily K member 16 isoform 2.)
genome : 39,282,474 - 39,290,330 (7,857)
query : 1 - 1,248 (1,248/1,251)
6 exons
identity = 1.000
3'(1.000)5'
coverage = 0.998
InterPro :
IPR003092 : Potassium channel, two pore, TASK family
IPR003280 : Potassium channel, two pore-domain
IPR013099 : Ion transport 2
GO :
0005267 : Molecular Function : potassium channel activity
0006813 : Biological Process : potassium ion transport
0016020 : Cellular Component : membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 30
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0032796)
HIX0032796
HIT000560044 (
NM_001135105
)
(Potassium channel subfamily K member 16 isoform 1.)
genome : 39,282,474 - 39,290,330 (7,857)
query : 1 - 1,409 (1,409/1,412)
5 exons
identity = 1.000
3'(1.000)5'
coverage = 0.998
InterPro :
IPR003280 : Potassium channel, two pore-domain
IPR013099 : Ion transport 2
GO :
0005267 : Molecular Function : potassium channel activity
0006813 : Biological Process : potassium ion transport
0016020 : Cellular Component : membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 24, extr 2, E.R. 2, pero 2, lyso 2
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0032796)
HIX0032796
HIT000560046 (
NM_001135107
)
(Potassium channel subfamily K member 16 isoform 4.)
genome : 39,282,474 - 39,290,330 (7,857)
query : 1 - 1,107 (1,107/1,110)
5 exons
identity = 1.000
3'(1.000)5'
coverage = 0.997
InterPro :
IPR003280 : Potassium channel, two pore-domain
IPR013099 : Ion transport 2
GO :
0005267 : Molecular Function : potassium channel activity
0006813 : Biological Process : potassium ion transport
0016020 : Cellular Component : membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 25, extr 3, E.R. 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0032796)
HIX0032796
HIT000354507 (
ENST00000373227
)
(Potassium channel subfamily K member 16 isoform 4.)
genome : 39,282,474 - 39,290,330 (7,857)
query : 1 - 1,107 (1,107/1,107)
5 exons
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0032796)
HIX0032796
HIT000354509 (
ENST00000373229
)
(Potassium channel subfamily K member 16 isoform 2.)
genome : 39,282,474 - 39,290,330 (7,857)
query : 1 - 1,248 (1,248/1,248)
6 exons
identity = 1.000
3'(1.000)5'
coverage = 1.000
InterPro :
IPR003092 : Potassium channel, two pore, TASK family
IPR003280 : Potassium channel, two pore-domain
IPR013099 : Ion transport 2
GO :
0005267 : Molecular Function : potassium channel activity
0006813 : Biological Process : potassium ion transport
0016020 : Cellular Component : membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 30
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0032796)
HIX0032796
HIT000522988 (
ENST00000425054
)
(Potassium channel subfamily K member 16 isoform 1.)
genome : 39,282,474 - 39,290,330 (7,857)
query : 1 - 1,409 (1,409/1,409)
5 exons
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0032796)
AL136087.12
39266507-39282506 F +
NCBI
MLT1J
MER5A
AluSx1
MER5A
L2b
MIR
MIRb
MER91C
MIR3
MIRb
MIRb
LTR16B1
L2b
AluSx
L2b
(TGAA)n
MIRb
AluSc5
MIR
MIRb
L2c
L2a
(TATG)n
AluSx1
MIRb
AluSz
MIRb
L2b
MER5A1
(CA)n
MIR
L2b
MIR
GC_rich