Clickable map CGI

HIX0032795
HIT000078238 ( AF352327 )
  (Hypothetical protein.)
  genome : 27,292,540 - 27,293,717 (1,178)
  query : 1 - 1,157 (1,157/1,157)
  1 exon
  identity = 0.982
  5'(0.982)3'
  coverage = 1.000
  SOSUI :
    MEMBRANE PROTEIN
  PSORT :
    plas 31
  H-InvDB(Transcript view)
  H-InvDB(Locus view)
  DDBJ
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0032795)

HIX0032795
HIT000503722 ( ENST00000401407 )
  (Vomeronasal receptor, type 1 family protein.)
  genome : 27,292,561 - 27,293,631 (1,071)
  query : 1 - 1,047 (1,047/1,047)
  1 exon
  identity = 0.978
  5'(0.978)3'
  coverage = 1.000
  InterPro :
    IPR004072 : Vomeronasal receptor, type 1
  GO :
    0007186 : Biological Process : G-protein coupled receptor protein signaling pathway
    0016021 : Cellular Component : integral to membrane
    0016503 : Molecular Function : pheromone receptor activity
  SOSUI :
    MEMBRANE PROTEIN
  PSORT :
    plas 31
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0032795)

HIX0032795
HIT000077838 ( AF336874 )
  (Hypothetical protein.)
  genome : 27,292,578 - 27,293,742 (1,165)
  query : 1 - 1,164 (1,164/1,164)
  1 exon
  identity = 0.999
  5'(0.999)3'
  coverage = 1.000
  SOSUI :
    MEMBRANE PROTEIN
  PSORT :
    plas 32
  H-InvDB(Transcript view)
  H-InvDB(Locus view)
  DDBJ
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0032795)

HIX0032795
HIT000210350 ( NM_032030 )
  (Similar to Uncharacterized protein;)
  genome : 27,292,578 - 27,293,742 (1,165)
  query : 1 - 1,165 (1,165/1,165)
  1 exon
  identity = 1.000
  5'(1.000)3'
  coverage = 1.000
  InterPro :
    IPR004072 : Vomeronasal receptor, type 1
  GO :
    0007186 : Biological Process : G-protein coupled receptor protein signaling pathway
    0016021 : Cellular Component : integral to membrane
    0016503 : Molecular Function : pheromone receptor activity
  SOSUI :
    MEMBRANE PROTEIN
  PSORT :
    mito 14, extr 6, plas 5, pero 4
  RefSeq
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0032795)

HIX0032795
HIT000338614 ( BC107050 )
  Representative transcript
  (Similar to Uncharacterized protein;)
  genome : 27,292,578 - 27,293,681 (1,104)
  query : 1 - 1,104 (1,104/1,104)
  1 exon
  identity = 1.000
  5'(1.000)3'
  coverage = 1.000
  InterPro :
    IPR004072 : Vomeronasal receptor, type 1
  GO :
    0007186 : Biological Process : G-protein coupled receptor protein signaling pathway
    0016021 : Cellular Component : integral to membrane
    0016503 : Molecular Function : pheromone receptor activity
  SOSUI :
    MEMBRANE PROTEIN
  PSORT :
    mito 14, extr 6, plas 5, pero 4
  H-InvDB(Transcript view)
  H-InvDB(Locus view)
  DDBJ
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0032795)
  Ortholog candidate  ( -> Evola )
    Rattus sp. (Rat) : AY510309
    Canis sp. (Dog) : ENSCAFT00000024440
    Equus sp. (Horse) : ENSECAT00000016900
    Monodelphis sp. (Opossum) : ENSMODT00000028800
    Pan sp. (Chimpanzee) : ENSPTRT00000032953
    Mus sp. (Mouse) : NM_134227

HIX0032795
HIT000545040 ( ENST00000447106 )
  (Similar to Uncharacterized protein;)
  genome : 27,292,673 - 27,293,547 (875)
  query : 1 - 875 (875/875)
  1 exon
  identity = 1.000
  5'(1.000)3'
  coverage = 1.000
  InterPro :
    IPR004072 : Vomeronasal receptor, type 1
  GO :
    0007186 : Biological Process : G-protein coupled receptor protein signaling pathway
    0016021 : Cellular Component : integral to membrane
    0016503 : Molecular Function : pheromone receptor activity
  SOSUI :
    MEMBRANE PROTEIN
  PSORT :
    mito 13, extr 7, cyto_mito 7, mito_nucl 7
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0032795)

HIX0164835
HIT000448793_14 ( DQ582262 )
  Representative transcript
  (Non-protein coding transcript.)
  genome : 27,300,803 - 27,300,833 (31)
  query : 1 - 31 (31/31)
  1 exon
  identity = 0.968
  3'(0.968)5'
  coverage = 1.000
  H-InvDB(Transcript view)
  H-InvDB(Locus view)
  DDBJ
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0164835)

HIX0164835
HIT000459806_13 ( DQ593275 )
  (Non-protein coding transcript.)
  genome : 27,300,804 - 27,300,834 (31)
  query : 2 - 32 (31/32)
  1 exon
  identity = 0.968
  3'(0.968)5'
  coverage = 0.969
  H-InvDB(Transcript view)
  H-InvDB(Locus view)
  DDBJ
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0164835)

AL021808.2
27285141-27301140 F +
NCBI

bases per tick : kb first site :
main : All Human Genes JIGSAW prediction ESTs assembly
homology : UCSC CCDS Pseudogene.org Conserved regions ( Segmental duplication P.troglodytes P.abelii M.mulatta M.musculus R.norvegicus C.familiaris E.caballus B.taurus M.domestica G.gallus D.rerio O.latipes T.nigroviridis T.rubripes )
gene prediction : FGENESH GenScan HMMgene tRNA
show... : SNPs ESTs(summary) ESTs(detail) CAGE tag(summary) CAGE tag(detail)
sequence viewer : = ( , )