Clickable map CGI

HIX0204519
HIT000566439 ( ENST00000461561 )
  (Conserved hypothetical protein.)
  genome : 87,643,988 - 87,644,526 (539)
  query : 1 - 539 (539/539)
  1 exon
  identity = 1.000
  5'(1.000)3'
  coverage = 1.000
  SOSUI :
    MEMBRANE PROTEIN
  PSORT :
    extr 14, mito 6, cyto 5, mito_nucl 5
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0204519)

HIX0204707
HIT000581388 ( ENST00000477233 )
  (Conserved hypothetical protein.)
  genome : 87,679,451 - 87,680,769 (1,319)
  query : 1 - 1,319 (1,319/1,319)
  1 exon
  identity = 1.000
  3'(1.000)5'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    mito 15, cyto_nucl 9, cyto 8.5, nucl 6.5
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0204707)

HIX0204539
HIT000567613 ( ENST00000462792 )
  (Hypothetical short protein.)
  genome : 87,780,552 - 87,842,779 (62,228)
  query : 1 - 766 (766/766)
  2 exons
  identity = 1.000
  3'(1.000;1.000)5'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    extr 15, cyto_nucl 8, mito 7, cyto 6, nucl 4
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0204539)

HIX0163522
HIT000506276 ( ENST00000408132 )
  (Hypothetical short protein.)
  genome : 87,959,370 - 87,959,495 (126)
  query : 1 - 126 (126/126)
  1 exon
  identity = 1.000
  5'(1.000)3'
  coverage = 1.000
  SOSUI :
    This sequence is too short.
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0163522)

HIX0030749
HIT000197876 ( NM_000866 )
  (5-hydroxytryptamine receptor 1F; 5-HT-1F; 5-HT1F; Serotonin receptor 1F;)
  genome : 88,031,726 - 88,042,919 (11,194)
  query : 1 - 3,178 (3,178/3,178)
  2 exons
  identity = 1.000
  5'(1.000;1.000)3'
  coverage = 1.000
  SOSUI :
    MEMBRANE PROTEIN
  PSORT :
    plas 32
  RefSeq
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0030749)

HIX0030749
HIT000397384 ( L05597 )
  Representative transcript
  (5-hydroxytryptamine receptor 1F; 5-HT-1F; 5-HT1F; Serotonin receptor 1F;)
  genome : 88,039,676 - 88,041,231 (1,556)
  query : 1 - 1,554 (1,554/1,554)
  1 exon
  identity = 0.999
  5'(0.999)3'
  coverage = 1.000
  InterPro :
    IPR000450 : 5-Hydroxytryptamine 1F receptor
    IPR002231 : 5-hydroxytryptamine receptor family
  GO :
    0004993 : Molecular Function : serotonin receptor activity
    0005887 : Cellular Component : integral component of plasma membrane
    0007186 : Biological Process : G-protein coupled receptor signaling pathway
  SOSUI :
    MEMBRANE PROTEIN
  PSORT :
    plas 32
  H-InvDB(Transcript view)
  H-InvDB(Locus view)
  DDBJ
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0030749)

HIX0030749
HIT000122117 ( ENST00000319595 )
  (5-hydroxytryptamine receptor 1F; 5-HT-1F; 5-HT1F; Serotonin receptor 1F;)
  genome : 88,039,846 - 88,042,919 (3,074)
  query : 1 - 3,074 (3,074/3,074)
  1 exon
  identity = 1.000
  5'(1.000)3'
  coverage = 1.000
  SOSUI :
    MEMBRANE PROTEIN
  PSORT :
    plas 32
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0030749)

HIX0030749
HIT000383139 ( AB037533 )
  (5-hydroxytryptamine receptor 1F.)
  genome : 88,039,871 - 88,040,995 (1,125)
  query : 1 - 1,125 (1,125/1,125)
  1 exon
  identity = 1.000
  5'(1.000)3'
  coverage = 1.000
  InterPro :
    IPR000450 : 5-Hydroxytryptamine 1F receptor
    IPR002231 : 5-hydroxytryptamine receptor family
  GO :
    0004993 : Molecular Function : serotonin receptor activity
    0005887 : Cellular Component : integral component of plasma membrane
    0007186 : Biological Process : G-protein coupled receptor signaling pathway
  SOSUI :
    MEMBRANE PROTEIN
  PSORT :
    plas 32
  H-InvDB(Transcript view)
  H-InvDB(Locus view)
  DDBJ
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0030749)

HIX0030749
HIT000397383 ( L04962 )
  (5-hydroxytryptamine receptor 1F; 5-HT-1F; 5-HT1F; Serotonin receptor 1F;)
  genome : 88,039,874 - 88,041,014 (1,141)
  query : 1 - 1,141 (1,141/1,141)
  1 exon
  identity = 1.000
  5'(1.000)3'
  coverage = 1.000
  InterPro :
    IPR000450 : 5-Hydroxytryptamine 1F receptor
    IPR002231 : 5-hydroxytryptamine receptor family
  GO :
    0004993 : Molecular Function : serotonin receptor activity
    0005887 : Cellular Component : integral component of plasma membrane
    0007186 : Biological Process : G-protein coupled receptor signaling pathway
  SOSUI :
    MEMBRANE PROTEIN
  PSORT :
    plas 32
  H-InvDB(Transcript view)
  H-InvDB(Locus view)
  DDBJ
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0030749)

HIX0030749
HIT000335738 ( BC096838 )
  (5-Hydroxytryptamine 1F receptor family protein.)
  genome : 88,039,900 - 88,040,999 (1,100)
  query : 2 - 1,100 (1,099/1,100)
  1 exon
  identity = 0.999
  5'(0.999)3'
  coverage = 0.999
  InterPro :
    IPR000450 : 5-Hydroxytryptamine 1F receptor
    IPR002231 : 5-hydroxytryptamine receptor family
  GO :
    0004993 : Molecular Function : serotonin receptor activity
    0005887 : Cellular Component : integral component of plasma membrane
    0007186 : Biological Process : G-protein coupled receptor signaling pathway
  SOSUI :
    MEMBRANE PROTEIN
  PSORT :
    plas 32
  H-InvDB(Transcript view)
  H-InvDB(Locus view)
  DDBJ
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0030749)

HIX0030749
HIT000080918 ( AF498981 )
  (5-hydroxytryptamine receptor 1F; 5-HT-1F; 5-HT1F; Serotonin receptor 1F;)
  genome : 88,039,900 - 88,041,000 (1,101)
  query : 1 - 1,101 (1,101/1,101)
  1 exon
  identity = 1.000
  5'(1.000)3'
  coverage = 1.000
  InterPro :
    IPR000450 : 5-Hydroxytryptamine 1F receptor
    IPR002231 : 5-hydroxytryptamine receptor family
  GO :
    0004993 : Molecular Function : serotonin receptor activity
    0005887 : Cellular Component : integral component of plasma membrane
    0007186 : Biological Process : G-protein coupled receptor signaling pathway
  SOSUI :
    MEMBRANE PROTEIN
  PSORT :
    plas 32
  H-InvDB(Transcript view)
  H-InvDB(Locus view)
  DDBJ
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0030749)

HIX0030749
HIT000263297 ( BC069125 )
  (5-hydroxytryptamine receptor 1F; 5-HT-1F; 5-HT1F; Serotonin receptor 1F;)
  genome : 88,039,900 - 88,041,000 (1,101)
  query : 1 - 1,101 (1,101/1,101)
  1 exon
  identity = 1.000
  5'(1.000)3'
  coverage = 1.000
  InterPro :
    IPR000450 : 5-Hydroxytryptamine 1F receptor
    IPR002231 : 5-hydroxytryptamine receptor family
  GO :
    0004993 : Molecular Function : serotonin receptor activity
    0005887 : Cellular Component : integral component of plasma membrane
    0007186 : Biological Process : G-protein coupled receptor signaling pathway
  SOSUI :
    MEMBRANE PROTEIN
  PSORT :
    plas 32
  H-InvDB(Transcript view)
  H-InvDB(Locus view)
  DDBJ
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0030749)

HIX0003480
HIT000656043 ( NM_001195308 )
  (CGG triplet repeat-binding protein 1; CGG-binding protein 1; 20 kDa CGG-binding protein; p20-CGGBP DNA-binding protein;)
  genome : 88,101,100 - 88,199,016 (97,917)
  query : 1 - 4,520 (4,520/4,589)
  4 exons
  identity = 1.000
  3'(1.000;1.000;1.000;1.000)5'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    mito 11, nucl 10.5, extr 8, cyto_nucl 8
  RefSeq
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0003480)

HIX0003480
HIT000200472 ( NM_003663 )
  (CGG triplet repeat-binding protein 1; CGG-binding protein 1; 20 kDa CGG-binding protein; p20-CGGBP DNA-binding protein;)
  genome : 88,101,100 - 88,108,146 (7,047)
  query : 1 - 4,437 (4,437/4,506)
  3 exons
  identity = 1.000
  3'(1.000;1.000;1.000)5'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    mito 11, nucl 10.5, extr 8, cyto_nucl 8
  RefSeq
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0003480)

HIX0003480
HIT000316509 ( NM_001008390 )
  (CGG triplet repeat-binding protein 1; CGG-binding protein 1; 20 kDa CGG-binding protein; p20-CGGBP DNA-binding protein;)
  genome : 88,101,100 - 88,108,146 (7,047)
  query : 1 - 4,539 (4,539/4,608)
  4 exons
  identity = 1.000
  3'(1.000;1.000;1.000;1.000)5'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    mito 11, nucl 10.5, extr 8, cyto_nucl 8
  RefSeq
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0003480)

HIX0003480
HIT000053852 ( BC052980 )
  Representative transcript
  (CGG triplet repeat-binding protein 1; CGG-binding protein 1; 20 kDa CGG-binding protein; p20-CGGBP DNA-binding protein;)
  genome : 88,101,100 - 88,108,048 (6,949)
  query : 1 - 4,334 (4,334/4,403)
  3 exons
  identity = 0.998
  3'(0.999;1.000;0.988)5'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    mito 11, nucl 10.5, extr 8, cyto_nucl 8
  H-InvDB(Transcript view)
  H-InvDB(Locus view)
  DDBJ
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0003480)
  Ortholog candidate  ( -> Evola )
    Macaca sp. (Macaque) : AB171616
    Mus sp. (Mouse) : BC043097
    Equus sp. (Horse) : ENSECAT00000005235
    Pongo sp. (Orangutan) : ENSPPYT00000015859
    Rattus sp. (Rat) : XM_001063614
    Gallus sp. (Chicken) : XM_001232948
    Monodelphis sp. (Opossum) : XM_001363764
    Canis sp. (Dog) : XM_535549
    Bos sp. (Cow) : XM_611424

HIX0003480
HIT000118380 ( ENST00000309534 )
  (CGG triplet repeat-binding protein 1; CGG-binding protein 1; 20 kDa CGG-binding protein; p20-CGGBP DNA-binding protein;)
  genome : 88,101,094 - 88,108,198 (7,105)
  query : 1 - 4,495 (4,495/4,495)
  3 exons
  identity = 1.000
  3'(1.000;1.000;1.000)5'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    mito 11, nucl 10.5, extr 8, cyto_nucl 8
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0003480)

HIX0003480
HIT000250392 ( AL357195 )
  (Hypothetical short protein.)
  genome : 88,101,165 - 88,101,717 (553)
  query : 1 - 553 (553/617)
  1 exon
  identity = 0.998
  3'(0.998)5'
  coverage = 1.000
  SOSUI :
    MEMBRANE PROTEIN
  PSORT :
    extr 31
  H-InvDB(Transcript view)
  H-InvDB(Locus view)
  DDBJ
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0003480)

HIX0003480
HIT000097182_03 ( BC042194 )
  (CGG triplet repeat-binding protein 1; CGG-binding protein 1; 20 kDa CGG-binding protein; p20-CGGBP DNA-binding protein;)
  genome : 88,101,165 - 88,106,459 (5,295)
  query : 1 - 5,290 (5,290/5,305)
  1 exon
  identity = 0.999
  3'(0.999)5'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    mito 11, nucl 10.5, extr 8, cyto_nucl 8
  H-InvDB(Transcript view)
  H-InvDB(Locus view)
  DDBJ
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0003480)

HIX0003480
HIT000481584 ( ENST00000398392 )
  (CGG triplet repeat-binding protein 1; CGG-binding protein 1; 20 kDa CGG-binding protein; p20-CGGBP DNA-binding protein;)
  genome : 88,101,162 - 88,106,459 (5,298)
  query : 1 - 5,298 (5,298/5,298)
  1 exon
  identity = 1.000
  3'(1.000)5'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    mito 11, nucl 10.5, extr 8, cyto_nucl 8
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0003480)

HIX0003480
HIT000024554 ( AL117392 )
  (CGG triplet repeat-binding protein 1.)
  genome : 88,101,274 - 88,108,091 (6,818)
  query : 1 - 4,206 (4,206/4,279)
  3 exons
  identity = 0.996
  3'(0.996;0.990;0.992)5'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    mito 11, nucl 10.5, extr 8, cyto_nucl 8
  H-InvDB(Transcript view)
  H-InvDB(Locus view)
  DDBJ
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0003480)

HIX0003480
HIT000243799 ( AJ000258 )
  (CGG triplet repeat-binding protein 1; CGG-binding protein 1; 20 kDa CGG-binding protein; p20-CGGBP DNA-binding protein;)
  genome : 88,104,564 - 88,107,231 (2,668)
  query : 9 - 759 (751/779)
  3 exons
  identity = 1.000
  3'(1.000;1.000;1.000)5'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    mito 11, nucl 10.5, extr 8, cyto_nucl 8
  H-InvDB(Transcript view)
  H-InvDB(Locus view)
  DDBJ
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0003480)

HIX0003480
HIT000032300 ( BC005222 )
  (CGG triplet repeat-binding protein 1; CGG-binding protein 1; 20 kDa CGG-binding protein; p20-CGGBP DNA-binding protein;)
  genome : 88,104,580 - 88,199,035 (94,456)
  query : 1 - 1,059 (1,059/1,090)
  4 exons
  identity = 0.999
  3'(0.998;1.000;1.000;1.000)5'
  coverage = 0.998
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    mito 11, nucl 10.5, extr 8, cyto_nucl 8
  H-InvDB(Transcript view)
  H-InvDB(Locus view)
  DDBJ
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0003480)

HIX0003480
HIT000585967 ( ENST00000482016 )
  (CGG triplet repeat-binding protein 1; CGG-binding protein 1; 20 kDa CGG-binding protein; p20-CGGBP DNA-binding protein;)
  genome : 88,104,564 - 88,108,218 (3,655)
  query : 1 - 1,147 (1,147/1,147)
  4 exons
  identity = 1.000
  3'(1.000;1.000;1.000;1.000)5'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    mito 11, nucl 10.5, extr 8, cyto_nucl 8
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0003480)

HIX0003480
HIT000567717 ( ENST00000462901 )
  (CGG triplet repeat-binding protein 1; CGG-binding protein 1; 20 kDa CGG-binding protein; p20-CGGBP DNA-binding protein;)
  genome : 88,104,576 - 88,199,035 (94,460)
  query : 1 - 1,063 (1,063/1,063)
  4 exons
  identity = 1.000
  3'(1.000;1.000;1.000;1.000)5'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    mito 11, nucl 10.5, extr 8, cyto_nucl 8
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0003480)

HIX0003480
HIT000267704 ( CR456854 )
  (CGG triplet repeat-binding protein 1; CGG-binding protein 1; 20 kDa CGG-binding protein; p20-CGGBP DNA-binding protein;)
  genome : 88,104,625 - 88,105,126 (502)
  query : 1 - 502 (502/504)
  1 exon
  identity = 1.000
  3'(1.000)5'
  coverage = 0.996
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    mito 11, nucl 10.5, extr 8, cyto_nucl 8
  H-InvDB(Transcript view)
  H-InvDB(Locus view)
  DDBJ
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0003480)

HIX0003480
HIT000571948 ( ENST00000467332 )
  (CGG triplet repeat-binding protein 1.)
  genome : 88,104,808 - 88,198,965 (94,158)
  query : 1 - 556 (556/556)
  3 exons
  identity = 1.000
  3'(1.000;1.000;1.000)5'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    extr 12, mito 10, nucl 9.5, cyto_nucl 5.5
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0003480)

HIX0003480
HIT000578732 ( ENST00000474441 )
  (Hypothetical short protein.)
  genome : 88,106,788 - 88,108,095 (1,308)
  query : 1 - 717 (717/717)
  2 exons
  identity = 1.000
  3'(1.000;1.000)5'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0003480)

HIX0204369
HIT000577478 ( ENST00000473136 )
  (Conserved hypothetical protein.)
  genome : 88,108,424 - 88,184,648 (76,225)
  query : 1 - 1,377 (1,377/1,377)
  7 exons
  identity = 1.000
  5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    plas 15, mito 7, extr 4, E.R._mito 4, mito_pero 4
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0204369)

HIX0204611
HIT000573036 ( ENST00000468470 )
  (Chromo shadow domain containing protein.)
  genome : 88,144,558 - 88,145,118 (561)
  query : 1 - 561 (561/561)
  1 exon
  identity = 1.000
  3'(1.000)5'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    cyto 23, extr 4, mito 4
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0204611)

HIX0031006
HIT000250396 ( AL357201 )
  Representative transcript
  (Non-protein coding transcript.)
  genome : 88,177,247 - 88,177,870 (624)
  query : 1 - 625 (625/625)
  1 exon
  identity = 0.997
  5'(0.997)3'
  coverage = 1.000
  H-InvDB(Transcript view)
  H-InvDB(Locus view)
  DDBJ
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0031006)

HIX0204369
HIT000601680 ( ENST00000498458 )
  (Conserved hypothetical protein.)
  genome : 88,178,081 - 88,188,123 (10,043)
  query : 1 - 632 (632/632)
  4 exons
  identity = 1.000
  5'(1.000;1.000;1.000;1.000)3'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    cyto 19, cyto_nucl 12, extr 9
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0204369)

HIX0031043
HIT000089604 ( BC018424 )
  Representative transcript
  (Conserved hypothetical protein.)
  genome : 88,185,088 - 88,188,592 (3,505)
  query : 1 - 3,505 (3,505/3,519)
  1 exon
  identity = 0.999
  3'(0.999)5'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    extr 14, cyto_nucl 10.5, nucl 8.5, cyto 7.5
  H-InvDB(Transcript view)
  H-InvDB(Locus view)
  DDBJ
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0031043)

HIX0200486
HIT000118366 ( ENST00000309495 )
  (Zinc finger protein 654;)
  genome : 88,188,254 - 88,193,815 (5,562)
  query : 1 - 4,966 (4,966/4,966)
  2 exons
  identity = 1.000
  5'(1.000;1.000)3'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    nucl 31.5, cyto_nucl 16.5
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0200486)

HIX0200486
HIT000081486 ( AF543494 )
  Representative transcript
  (Zinc finger protein 654;)
  genome : 88,188,262 - 88,191,301 (3,040)
  query : 2 - 2,446 (2,445/2,446)
  2 exons
  identity = 0.998
  5'(1.000;0.992)3'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    nucl 31.5, cyto_nucl 16.5
  H-InvDB(Transcript view)
  H-InvDB(Locus view)
  DDBJ
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0200486)
  Ortholog candidate  ( -> Evola )
    Mus sp. (Mouse) : BC068018
    Bos sp. (Cow) : ENSBTAT00000032410
    Pongo sp. (Orangutan) : ENSPPYT00000015860
    Tetraodon sp. (Tetraodon) : GSTENT00015822001
    Danio sp. (Zebrafish) : XM_001344108
    Monodelphis sp. (Opossum) : XM_001380003
    Equus sp. (Horse) : XM_001499992
    Canis sp. (Dog) : XM_544797

HIX0200486
HIT000207113 ( NM_018293 )
  (Zinc finger protein 654;)
  genome : 88,188,262 - 88,193,814 (5,553)
  query : 1 - 4,957 (4,957/4,957)
  2 exons
  identity = 1.000
  5'(1.000;1.000)3'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    nucl 31.5, cyto_nucl 16.5
  RefSeq
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0200486)

HIX0200486
HIT000004333 ( AK001859 )
  (Zinc finger protein 654;)
  genome : 88,188,475 - 88,191,222 (2,748)
  query : 1 - 2,152 (2,152/2,152)
  2 exons
  identity = 0.997
  5'(0.998;0.993)3'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    nucl 32
  H-InvDB(Transcript view)
  H-InvDB(Locus view)
  DDBJ
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0200486)

HIX0200486
HIT000008069 ( AK024795 )
  (Zinc finger protein 654;)
  genome : 88,189,599 - 88,191,435 (1,837)
  query : 1 - 1,242 (1,242/1,258)
  2 exons
  identity = 0.998
  5'(0.998;0.997)3'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    nucl 17.5, cyto_nucl 13, cyto 7.5, extr 5
  H-InvDB(Transcript view)
  H-InvDB(Locus view)
  DDBJ
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0200486)

HIX0019911
HIT000215103 ( NM_173824 )
  (Uncharacterized protein C3orf38;)
  genome : 88,198,893 - 88,207,114 (8,222)
  query : 1 - 2,630 (2,630/2,782)
  3 exons
  identity = 0.999
  5'(0.993)3'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    cyto 17.5, cyto_nucl 16, nucl 11.5
  RefSeq
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0019911)

HIX0019911
HIT000121847 ( ENST00000318887 )
  (Uncharacterized protein C3orf38;)
  genome : 88,198,893 - 88,207,118 (8,226)
  query : 1 - 2,633 (2,633/2,633)
  3 exons
  identity = 1.000
  5'(1.000)3'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    cyto 17.5, cyto_nucl 16, nucl 11.5
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0019911)

HIX0019911
HIT000039758 ( BC024188 )
  (Uncharacterized protein C3orf38;)
  genome : 88,199,109 - 88,206,068 (6,960)
  query : 1 - 1,368 (1,368/1,382)
  3 exons
  identity = 0.998
  5'(0.996)3'
  coverage = 1.000
  InterPro :
    IPR026698 : Uncharacterised protein C3orf38 (DUF4518)
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    cyto 17.5, cyto_nucl 16, nucl 11.5
  H-InvDB(Transcript view)
  H-InvDB(Locus view)
  DDBJ
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0019911)

HIX0019911
HIT000492343 ( AK297719 )
  (Uncharacterized protein C3orf38;)
  genome : 88,199,137 - 88,206,094 (6,958)
  query : 1 - 1,260 (1,260/1,260)
  3 exons
  identity = 0.998
  5'(0.995)3'
  coverage = 1.000
  InterPro :
    IPR026698 : Uncharacterised protein C3orf38 (DUF4518)
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    cyto 19.5, cyto_nucl 14.5, nucl 8.5
  H-InvDB(Transcript view)
  H-InvDB(Locus view)
  DDBJ
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0019911)

HIX0019911
HIT000590693 ( ENST00000486971 )
  (Uncharacterized protein C3orf38;)
  genome : 88,199,137 - 88,206,094 (6,958)
  query : 1 - 1,259 (1,259/1,259)
  3 exons
  identity = 1.000
  5'(1.000)3'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    cyto 19.5, cyto_nucl 14.5, nucl 8.5
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0019911)

HIX0019911
HIT000432413 ( AK313547 )
  (Uncharacterized protein C3orf38;)
  genome : 88,199,152 - 88,205,785 (6,634)
  query : 1 - 1,042 (1,042/1,042)
  3 exons
  identity = 0.999
  5'(0.995)3'
  coverage = 1.000
  InterPro :
    IPR026698 : Uncharacterised protein C3orf38 (DUF4518)
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    cyto 17.5, cyto_nucl 16, nucl 11.5
  H-InvDB(Transcript view)
  H-InvDB(Locus view)
  DDBJ
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0019911)

HIX0019911
HIT000569639 ( ENST00000464919 )
  (Uncharacterized protein C3orf38;)
  genome : 88,199,754 - 88,202,496 (2,743)
  query : 1 - 586 (586/586)
  2 exons
  identity = 1.000
  5'(1.000)3'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    mito 24.5, mito_pero 13.5, nucl 2.5, cyto_nucl 2.5,
    extr 2
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0019911)

AC130885.3
87400001-87445325 F +
NCBI

AC128692.11
87445326-87489153 F -
NCBI

AC116546.1
87489154-87647569 F +
NCBI

AC108749.11
87647570-87793198 F -
NCBI

AC117513.4
87793199-87860419 F +
NCBI

AC119034.2
87860420-88015949 F +
NCBI

AC132004.5
88015950-88037940 F +
NCBI

AC119733.2
88037941-88190743 F +
NCBI

AC128650.6
88190744-88200000 F -
NCBI

bases per tick : kb first site :
main : All Human Genes JIGSAW prediction ESTs assembly
homology : UCSC CCDS Pseudogene.org Conserved regions ( Segmental duplication P.troglodytes P.abelii M.mulatta M.musculus R.norvegicus C.familiaris E.caballus B.taurus M.domestica G.gallus D.rerio O.latipes T.nigroviridis T.rubripes )
gene prediction : FGENESH GenScan HMMgene tRNA
show... : SNPs ESTs(summary) ESTs(detail) CAGE tag(summary) CAGE tag(detail)
sequence viewer : = ( , )