bases per tick :
500
200
100
50
20
10
5
2
kb first site :
main :
All Human Genes
JIGSAW prediction
ESTs assembly
homology :
UCSC
CCDS
Pseudogene.org
Conserved regions (
Segmental duplication
P.troglodytes
P.abelii
M.mulatta
M.musculus
R.norvegicus
C.familiaris
E.caballus
B.taurus
M.domestica
G.gallus
D.rerio
O.latipes
T.nigroviridis
T.rubripes
)
gene prediction :
FGENESH
GenScan
HMMgene
tRNA
show... :
SNPs
ESTs(summary)
ESTs(detail)
CAGE tag(summary)
CAGE tag(detail)
sequence viewer :
( start, end )
( middle, total length )
= (
,
)
HIX0023917
HIT000056821
(
BX648174
)
(Similar to Cyclin T2 variant b; Fragment;)
genome : 135,675,805 - 135,714,413 (38,609)
query : 3 - 5,449 (5,447/5,460)
10 exons
identity = 0.990
5'(1.000;1.000;1.000;1.000;0.995;1.000;1.000;
0.997)3'
coverage = 0.999
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 19, nucl 12
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023917)
HIX0023917
HIT000517715 (
ENST00000419781
)
(Similar to Cyclin T2 variant b; Fragment;)
genome : 135,675,805 - 135,714,413 (38,609)
query : 1 - 5,414 (5,414/5,414)
10 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
InterPro :
IPR006670 : Cyclin
IPR006671 : Cyclin, N-terminal
IPR011028 : Cyclin-like
IPR013763 : Cyclin-related
IPR015429 : Transcription regulator cyclin
IPR015430 : Cyclin T
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 12.5, nucl 10, cyto 9, extr 6, mito 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023917)
HIX0023917
HIT000544181 (
ENST00000446247
)
(Similar to Cyclin-T2; CycT2;)
genome : 135,675,811 - 135,710,895 (35,085)
query : 1 - 663 (663/663)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR006671 : Cyclin, N-terminal
IPR011028 : Cyclin-like
IPR013763 : Cyclin-related
IPR015429 : Transcription regulator cyclin
IPR015430 : Cyclin T
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18.5, cyto_nucl 11.5, extr 8, nucl 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023917)
HIX0023917
HIT000198236 (
NM_001241
)
(Cyclin-T2 isoform a.)
genome : 135,676,392 - 135,716,915 (40,524)
query : 1 - 6,822 (6,822/6,822)
10 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
InterPro :
IPR006670 : Cyclin
IPR006671 : Cyclin, N-terminal
IPR011028 : Cyclin-like
IPR013763 : Cyclin-related
IPR015429 : Transcription regulator cyclin
IPR015430 : Cyclin T
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023917)
HIX0023917
HIT000211734 (
NM_058241
)
(Cyclin-T2 isoform b.)
genome : 135,676,392 - 135,716,915 (40,524)
query : 1 - 6,923 (6,923/6,923)
9 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR006670 : Cyclin
IPR006671 : Cyclin, N-terminal
IPR011028 : Cyclin-like
IPR013763 : Cyclin-related
IPR015429 : Transcription regulator cyclin
IPR015430 : Cyclin T
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023917)
HIX0023917
HIT000659939 (
NR_037649
)
(Similar to Cyclin T2 variant b; Fragment;)
genome : 135,676,392 - 135,716,915 (40,524)
query : 1 - 6,909 (6,909/6,909)
11 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
InterPro :
IPR006670 : Cyclin
IPR006671 : Cyclin, N-terminal
IPR011028 : Cyclin-like
IPR013763 : Cyclin-related
IPR015429 : Transcription regulator cyclin
IPR015430 : Cyclin T
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 12.5, nucl 10, cyto 9, extr 6, mito 5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023917)
HIX0023917
HIT000489513
(
AK294889
)
(Cyclin-T2; CycT2;)
genome : 135,676,392 - 135,712,369 (35,978)
query : 1 - 2,363 (2,363/2,363)
11 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
InterPro :
IPR015429 : Transcription regulator cyclin
IPR015430 : Cyclin T
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 27, cyto_nucl 16.5, cyto 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023917)
HIX0023917
HIT000550773 (
ENST00000452839
)
(Cyclin-T2; CycT2;)
genome : 135,676,392 - 135,712,369 (35,978)
query : 1 - 2,363 (2,363/2,363)
11 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
InterPro :
IPR015429 : Transcription regulator cyclin
IPR015430 : Cyclin T
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 27, cyto_nucl 16.5, cyto 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023917)
HIX0023917
HIT000636388 (
ENST00000537343
)
(Cyclin-T2; CycT2;)
genome : 135,676,392 - 135,712,369 (35,978)
query : 1 - 2,363 (2,363/2,363)
11 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
InterPro :
IPR015429 : Transcription regulator cyclin
IPR015430 : Cyclin T
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 27, cyto_nucl 16.5, cyto 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023917)
HIX0023917
HIT000064153
(
AF048731
)
Representative transcript
(Cyclin-T2 isoform a.)
genome : 135,676,393 - 135,714,587 (38,195)
query : 1 - 4,479 (4,479/4,499)
10 exons
identity = 0.993
5'(1.000;1.000;1.000;1.000;1.000;1.000;0.998;
0.989)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023917)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK156231
Danio
sp. (Zebrafish) : BC044378
Gallus
sp. (Chicken) : CR353655
Oryzias
sp. (Medaka) : ENSORLT00000005424
Oryzias
sp. (Medaka) : ENSORLT00000022705
Pongo
sp. (Orangutan) : ENSPPYT00000014877
Tetraodon
sp. (Tetraodon) : GSTENT00014481001
Takifugu
sp. (Fugu) : SINFRUT00000158231
Takifugu
sp. (Fugu) : SINFRUT00000159426
Macaca
sp. (Macaque) : XM_001097297
Pan
sp. (Chimpanzee) : XM_001152297
Bos
sp. (Cow) : XM_001250304
Monodelphis
sp. (Opossum) : XM_001363590
Equus
sp. (Horse) : XM_001915413
Rattus
sp. (Rat) : XM_222617
Canis
sp. (Dog) : XM_533333
HIX0023917
HIT000109200 (
ENST00000264157
)
(Cyclin-T2 isoform b.)
genome : 135,676,393 - 135,714,586 (38,194)
query : 1 - 4,593 (4,593/4,593)
9 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 19, nucl 12
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023917)
HIX0023917
HIT000114103 (
ENST00000295238
)
(Cyclin-T2 isoform a.)
genome : 135,676,393 - 135,714,586 (38,194)
query : 1 - 4,492 (4,492/4,492)
10 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 19, nucl 12
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023917)
HIX0023917
HIT000425710
(
AK292913
)
(Cyclin-T2 isoform b.)
genome : 135,676,400 - 135,712,646 (36,247)
query : 1 - 2,646 (2,646/2,646)
9 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR006670 : Cyclin
IPR006671 : Cyclin, N-terminal
IPR011028 : Cyclin-like
IPR013763 : Cyclin-related
IPR015429 : Transcription regulator cyclin
IPR015430 : Cyclin T
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023917)
HIX0023917
HIT000340663
(
BC114366
)
(Cyclin-T2 isoform a.)
genome : 135,676,406 - 135,712,989 (36,584)
query : 1 - 2,882 (2,882/2,882)
10 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;0.998;
1.000)3'
coverage = 1.000
InterPro :
IPR006670 : Cyclin
IPR006671 : Cyclin, N-terminal
IPR011028 : Cyclin-like
IPR013763 : Cyclin-related
IPR015429 : Transcription regulator cyclin
IPR015430 : Cyclin T
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023917)
HIX0023917
HIT000579353 (
ENST00000475094
)
(Similar to Cyclin T2 variant b; Fragment;)
genome : 135,676,407 - 135,700,339 (23,933)
query : 1 - 606 (606/606)
5 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR006670 : Cyclin
IPR006671 : Cyclin, N-terminal
IPR011028 : Cyclin-like
IPR013763 : Cyclin-related
IPR015429 : Transcription regulator cyclin
IPR015430 : Cyclin T
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 11.5, nucl 10, extr 8, cyto 7, mito 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023917)
HIX0023917
HIT000515109 (
ENST00000417175
)
(Similar to Cyclin T2 variant b; Fragment;)
genome : 135,676,417 - 135,703,784 (27,368)
query : 1 - 811 (811/811)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR006670 : Cyclin
IPR006671 : Cyclin, N-terminal
IPR011028 : Cyclin-like
IPR013763 : Cyclin-related
IPR015429 : Transcription regulator cyclin
IPR015430 : Cyclin T
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 11.5, extr 11, nucl 10, cyto 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023917)
HIX0023917
HIT000064154
(
AF048732
)
(Cyclin-T2; CycT2;)
genome : 135,676,425 - 135,712,218 (35,794)
query : 1 - 2,193 (2,193/2,193)
9 exons
identity = 0.998
5'(1.000;1.000;1.000;1.000;1.000;1.000;0.997)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023917)
HIX0023917
HIT000550455 (
ENST00000452521
)
(Similar to Cyclin-T2; CycT2;)
genome : 135,705,300 - 135,712,408 (7,109)
query : 1 - 638 (638/638)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR015429 : Transcription regulator cyclin
IPR015430 : Cyclin T
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 24, pero 3, lyso 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023917)
HIX0023917
HIT000536625 (
ENST00000438691
)
(Similar to Cyclin-T1; CycT1; Cyclin-T;)
genome : 135,705,396 - 135,710,768 (5,373)
query : 1 - 632 (632/632)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
InterPro :
IPR015429 : Transcription regulator cyclin
IPR015430 : Cyclin T
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20, extr 5, nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023917)
HIX0023917
HIT000082076
(
AK075041
)
(Similar to Cyclin-T2 isoform a.)
genome : 135,711,348 - 135,713,043 (1,696)
query : 1 - 1,595 (1,595/1,595)
2 exons
identity = 0.998
5'(0.997;0.999)3'
coverage = 1.000
InterPro :
IPR015429 : Transcription regulator cyclin
IPR015430 : Cyclin T
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16.5, cyto_nucl 16, nucl 10.5, extr 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023917)
HIX0002472
HIT000006919
(
AK023645
)
Representative transcript
(Hypothetical protein.)
genome : 135,715,089 - 135,716,915 (1,827)
query : 1 - 1,822 (1,822/1,822)
1 exon
identity = 0.995
3'(0.995)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 11, cyto_nucl 10.8333, nucl 10, cyto 9.5,
cyto_pero 5.66667, mito_nucl 5.66667
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002472)
HIX0002473
HIT000209684 (
NM_025052
)
(SPS1/STE20-related protein kinase YSK4; EC=2.7.11.1; Regulated in COPD, protein kinase;)
genome : 135,722,273 - 135,782,248 (59,976)
query : 1 - 4,165 (4,165/4,165)
10 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.7.1.37
,
EC 2.7.11.1
KEGG pathway :
04150 : mTOR signaling pathway (5)
InterPro :
IPR000719 : Protein kinase, catalytic domain
IPR002290 : Serine/threonine-protein kinase domain
IPR008271 : Serine/threonine-protein kinase, active site
IPR011009 : Protein kinase-like domain
IPR015748 : Mitogen activated protein kinase kinase kinase 3
IPR017441 : Protein kinase, ATP binding site
IPR017442 : Serine/threonine-protein kinase-like domain
IPR020635 : Tyrosine-protein kinase, catalytic domain
GO :
0004672 : Molecular Function : protein kinase activity
0004674 : Molecular Function : protein serine/threonine kinase activity
0005524 : Molecular Function : ATP binding
0006468 : Biological Process : protein phosphorylation
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 15.5, cyto_nucl 15.5, cyto 14.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002473)
HIX0002473
HIT000312089 (
ENST00000358371
)
(SPS1/STE20-related protein kinase YSK4; EC=2.7.11.1; Regulated in COPD, protein kinase;)
genome : 135,722,273 - 135,782,248 (59,976)
query : 1 - 3,826 (3,826/3,826)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
EC number :
EC 2.7.1.37
InterPro :
IPR000719 : Protein kinase, catalytic domain
IPR002290 : Serine/threonine-protein kinase domain
IPR008271 : Serine/threonine-protein kinase, active site
IPR011009 : Protein kinase-like domain
IPR015748 : Mitogen activated protein kinase kinase kinase 3
IPR017441 : Protein kinase, ATP binding site
IPR017442 : Serine/threonine-protein kinase-like domain
GO :
0004672 : Molecular Function : protein kinase activity
0004674 : Molecular Function : protein serine/threonine kinase activity
0005524 : Molecular Function : ATP binding
0006468 : Biological Process : protein phosphorylation
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 15.5, cyto_nucl 15.5, cyto 14.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002473)
HIX0002473
HIT000357124 (
ENST00000375844
)
(Similar to SPS1/STE20-related protein kinase YSK4; EC=2.7.11.1; Regulated in COPD, protein kinase;)
genome : 135,722,273 - 135,782,248 (59,976)
query : 1 - 1,711 (1,711/1,711)
9 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.7.1.37
InterPro :
IPR000719 : Protein kinase, catalytic domain
IPR002290 : Serine/threonine-protein kinase domain
IPR008271 : Serine/threonine-protein kinase, active site
IPR011009 : Protein kinase-like domain
IPR015748 : Mitogen activated protein kinase kinase kinase 3
IPR017441 : Protein kinase, ATP binding site
IPR017442 : Serine/threonine-protein kinase-like domain
GO :
0004672 : Molecular Function : protein kinase activity
0004674 : Molecular Function : protein serine/threonine kinase activity
0005524 : Molecular Function : ATP binding
0006468 : Biological Process : protein phosphorylation
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 15, nucl 14.5, cyto 14.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002473)
HIX0002473
HIT000357125 (
ENST00000375845
)
(SPS1/STE20-related protein kinase YSK4; EC=2.7.11.1; Regulated in COPD, protein kinase;)
genome : 135,722,273 - 135,782,248 (59,976)
query : 1 - 4,165 (4,165/4,165)
10 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.7.1.37
InterPro :
IPR000719 : Protein kinase, catalytic domain
IPR002290 : Serine/threonine-protein kinase domain
IPR008271 : Serine/threonine-protein kinase, active site
IPR011009 : Protein kinase-like domain
IPR015748 : Mitogen activated protein kinase kinase kinase 3
IPR017441 : Protein kinase, ATP binding site
IPR017442 : Serine/threonine-protein kinase-like domain
IPR020635 : Tyrosine-protein kinase, catalytic domain
GO :
0004672 : Molecular Function : protein kinase activity
0004674 : Molecular Function : protein serine/threonine kinase activity
0005524 : Molecular Function : ATP binding
0006468 : Biological Process : protein phosphorylation
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 15.5, cyto_nucl 15.5, cyto 14.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002473)
HIX0002473
HIT000365579 (
NM_001018046
)
(Similar to SPS1/STE20-related protein kinase YSK4; EC=2.7.11.1; Regulated in COPD, protein kinase;)
genome : 135,722,273 - 135,782,248 (59,976)
query : 1 - 1,711 (1,711/1,711)
9 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.7.1.37
,
EC 2.7.11.1
KEGG pathway :
04150 : mTOR signaling pathway (5)
InterPro :
IPR000719 : Protein kinase, catalytic domain
IPR002290 : Serine/threonine-protein kinase domain
IPR008271 : Serine/threonine-protein kinase, active site
IPR011009 : Protein kinase-like domain
IPR015748 : Mitogen activated protein kinase kinase kinase 3
IPR017441 : Protein kinase, ATP binding site
IPR017442 : Serine/threonine-protein kinase-like domain
GO :
0004672 : Molecular Function : protein kinase activity
0004674 : Molecular Function : protein serine/threonine kinase activity
0005524 : Molecular Function : ATP binding
0006468 : Biological Process : protein phosphorylation
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 15, nucl 14.5, cyto 14.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002473)
HIX0002473
HIT000476388 (
ENST00000392918
)
(Similar to SPS1/STE20-related protein kinase YSK4; EC=2.7.11.1; Regulated in COPD, protein kinase;)
genome : 135,722,273 - 135,782,248 (59,976)
query : 1 - 1,567 (1,567/1,567)
9 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16.5, cyto_nucl 15, cyto 12.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002473)
HIX0002473
HIT000120538 (
ENST00000315513
)
(Similar to SPS1/STE20-related protein kinase YSK4; EC=2.7.11.1; Regulated in COPD, protein kinase;)
genome : 135,722,273 - 135,781,099 (58,827)
query : 1 - 4,337 (4,337/4,337)
11 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18.5, cyto_nucl 13, cyto 6.5, mito 4,
E.R._mito 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002473)
HIX0002473
HIT000331953
(
AY574901
)
Representative transcript
(SPS1/STE20-related protein kinase YSK4; EC=2.7.11.1; Regulated in COPD, protein kinase;)
genome : 135,722,380 - 135,782,248 (59,869)
query : 1 - 4,058 (4,058/4,058)
10 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.7.1.37
InterPro :
IPR000719 : Protein kinase, catalytic domain
IPR002290 : Serine/threonine-protein kinase domain
IPR008271 : Serine/threonine-protein kinase, active site
IPR011009 : Protein kinase-like domain
IPR015748 : Mitogen activated protein kinase kinase kinase 3
IPR017441 : Protein kinase, ATP binding site
IPR017442 : Serine/threonine-protein kinase-like domain
IPR020635 : Tyrosine-protein kinase, catalytic domain
GO :
0004672 : Molecular Function : protein kinase activity
0004674 : Molecular Function : protein serine/threonine kinase activity
0005524 : Molecular Function : ATP binding
0006468 : Biological Process : protein phosphorylation
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 15.5, cyto_nucl 15.5, cyto 14.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002473)
Ortholog candidate ( ->
Evola
)
Equus
sp. (Horse) : ENSECAT00000010177
Monodelphis
sp. (Opossum) : ENSMODT00000000957
Pongo
sp. (Orangutan) : ENSPPYT00000014878
Macaca
sp. (Macaque) : XM_001101814
Mus
sp. (Mouse) : XM_001477564
Gallus
sp. (Chicken) : XM_426605
Pan
sp. (Chimpanzee) : XM_525928
Canis
sp. (Dog) : XM_541017
Bos
sp. (Cow) : XM_583510
Danio
sp. (Zebrafish) : XM_695910
HIX0002473
HIT000331954
(
AY574902
)
(SPS1/STE20-related protein kinase YSK4; EC=2.7.11.1; Regulated in COPD, protein kinase;)
genome : 135,722,380 - 135,782,248 (59,869)
query : 1 - 3,719 (3,719/3,719)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
EC number :
EC 2.7.1.37
InterPro :
IPR000719 : Protein kinase, catalytic domain
IPR002290 : Serine/threonine-protein kinase domain
IPR008271 : Serine/threonine-protein kinase, active site
IPR011009 : Protein kinase-like domain
IPR015748 : Mitogen activated protein kinase kinase kinase 3
IPR017441 : Protein kinase, ATP binding site
IPR017442 : Serine/threonine-protein kinase-like domain
GO :
0004672 : Molecular Function : protein kinase activity
0004674 : Molecular Function : protein serine/threonine kinase activity
0005524 : Molecular Function : ATP binding
0006468 : Biological Process : protein phosphorylation
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 15.5, cyto_nucl 15.5, cyto 14.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002473)
HIX0002473
HIT000331955
(
AY574903
)
(Similar to SPS1/STE20-related protein kinase YSK4; EC=2.7.11.1; Regulated in COPD, protein kinase;)
genome : 135,722,380 - 135,782,248 (59,869)
query : 1 - 3,510 (3,510/3,510)
10 exons
identity = 0.998
3'(1.000;0.953;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR000719 : Protein kinase, catalytic domain
IPR011009 : Protein kinase-like domain
IPR015748 : Mitogen activated protein kinase kinase kinase 3
IPR017441 : Protein kinase, ATP binding site
IPR017442 : Serine/threonine-protein kinase-like domain
GO :
0004672 : Molecular Function : protein kinase activity
0004674 : Molecular Function : protein serine/threonine kinase activity
0005524 : Molecular Function : ATP binding
0006468 : Biological Process : protein phosphorylation
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16, cyto 13
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002473)
HIX0002473
HIT000331956
(
AY574904
)
(Similar to SPS1/STE20-related protein kinase YSK4; EC=2.7.11.1; Regulated in COPD, protein kinase;)
genome : 135,722,380 - 135,782,248 (59,869)
query : 1 - 1,604 (1,604/1,604)
9 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.7.1.37
InterPro :
IPR000719 : Protein kinase, catalytic domain
IPR002290 : Serine/threonine-protein kinase domain
IPR008271 : Serine/threonine-protein kinase, active site
IPR011009 : Protein kinase-like domain
IPR015748 : Mitogen activated protein kinase kinase kinase 3
IPR017441 : Protein kinase, ATP binding site
IPR017442 : Serine/threonine-protein kinase-like domain
GO :
0004672 : Molecular Function : protein kinase activity
0004674 : Molecular Function : protein serine/threonine kinase activity
0005524 : Molecular Function : ATP binding
0006468 : Biological Process : protein phosphorylation
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 15, nucl 14.5, cyto 14.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002473)
HIX0002473
HIT000331957
(
AY574905
)
(Similar to SPS1/STE20-related protein kinase YSK4; EC=2.7.11.1; Regulated in COPD, protein kinase;)
genome : 135,722,380 - 135,782,248 (59,869)
query : 1 - 1,460 (1,460/1,460)
9 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.7.1.37
InterPro :
IPR000719 : Protein kinase, catalytic domain
IPR008271 : Serine/threonine-protein kinase, active site
IPR011009 : Protein kinase-like domain
IPR015748 : Mitogen activated protein kinase kinase kinase 3
IPR017442 : Serine/threonine-protein kinase-like domain
GO :
0004672 : Molecular Function : protein kinase activity
0004674 : Molecular Function : protein serine/threonine kinase activity
0005524 : Molecular Function : ATP binding
0006468 : Biological Process : protein phosphorylation
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16.5, cyto_nucl 15, cyto 12.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002473)
HIX0002473
HIT000501220
(
BC137276
)
(SPS1/STE20-related protein kinase YSK4; EC=2.7.11.1; Regulated in COPD, protein kinase;)
genome : 135,722,380 - 135,782,247 (59,868)
query : 1 - 4,057 (4,057/4,057)
10 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.7.1.37
InterPro :
IPR000719 : Protein kinase, catalytic domain
IPR002290 : Serine/threonine-protein kinase domain
IPR008271 : Serine/threonine-protein kinase, active site
IPR011009 : Protein kinase-like domain
IPR015748 : Mitogen activated protein kinase kinase kinase 3
IPR017441 : Protein kinase, ATP binding site
IPR017442 : Serine/threonine-protein kinase-like domain
IPR020635 : Tyrosine-protein kinase, catalytic domain
GO :
0004672 : Molecular Function : protein kinase activity
0004674 : Molecular Function : protein serine/threonine kinase activity
0005524 : Molecular Function : ATP binding
0006468 : Biological Process : protein phosphorylation
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 15.5, cyto_nucl 15.5, cyto 14.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002473)
HIX0002473
HIT000501221
(
BC137277
)
(SPS1/STE20-related protein kinase YSK4; EC=2.7.11.1; Regulated in COPD, protein kinase;)
genome : 135,722,380 - 135,782,247 (59,868)
query : 1 - 4,057 (4,057/4,057)
10 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.7.1.37
InterPro :
IPR000719 : Protein kinase, catalytic domain
IPR002290 : Serine/threonine-protein kinase domain
IPR008271 : Serine/threonine-protein kinase, active site
IPR011009 : Protein kinase-like domain
IPR015748 : Mitogen activated protein kinase kinase kinase 3
IPR017441 : Protein kinase, ATP binding site
IPR017442 : Serine/threonine-protein kinase-like domain
IPR020635 : Tyrosine-protein kinase, catalytic domain
GO :
0004672 : Molecular Function : protein kinase activity
0004674 : Molecular Function : protein serine/threonine kinase activity
0005524 : Molecular Function : ATP binding
0006468 : Biological Process : protein phosphorylation
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 15.5, cyto_nucl 15.5, cyto 14.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002473)
HIX0002473
HIT000502961
(
BC144555
)
(Similar to Uncharacterized protein; Fragment;)
genome : 135,722,380 - 135,782,247 (59,868)
query : 1 - 1,453 (1,453/1,453)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
EC number :
EC 2.7.1.37
InterPro :
IPR000719 : Protein kinase, catalytic domain
IPR002290 : Serine/threonine-protein kinase domain
IPR008271 : Serine/threonine-protein kinase, active site
IPR011009 : Protein kinase-like domain
IPR015748 : Mitogen activated protein kinase kinase kinase 3
IPR017442 : Serine/threonine-protein kinase-like domain
GO :
0004672 : Molecular Function : protein kinase activity
0004674 : Molecular Function : protein serine/threonine kinase activity
0005524 : Molecular Function : ATP binding
0006468 : Biological Process : protein phosphorylation
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 15.5, cyto_nucl 15, cyto 13.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002473)
HIX0002473
HIT000010001
(
AK026727
)
(Similar to SPS1/STE20-related protein kinase YSK4; EC=2.7.11.1; Regulated in COPD, protein kinase;)
genome : 135,737,231 - 135,739,222 (1,992)
query : 1 - 1,999 (1,999/2,022)
1 exon
identity = 0.994
3'(0.994)5'
coverage = 1.000
EC number :
EC 2.7.1.37
InterPro :
IPR000719 : Protein kinase, catalytic domain
IPR002290 : Serine/threonine-protein kinase domain
IPR008271 : Serine/threonine-protein kinase, active site
IPR011009 : Protein kinase-like domain
IPR015748 : Mitogen activated protein kinase kinase kinase 3
IPR017442 : Serine/threonine-protein kinase-like domain
IPR020635 : Tyrosine-protein kinase, catalytic domain
GO :
0004672 : Molecular Function : protein kinase activity
0004674 : Molecular Function : protein serine/threonine kinase activity
0005524 : Molecular Function : ATP binding
0006468 : Biological Process : protein phosphorylation
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18.5, cyto_nucl 17, nucl 6.5, pero 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002473)
HIX0002473
HIT000384709
(
AK225579
)
(Similar to SPS1/STE20-related protein kinase YSK4; EC=2.7.11.1; Regulated in COPD, protein kinase;)
genome : 135,737,246 - 135,739,222 (1,977)
query : 1 - 1,984 (1,984/1,984)
1 exon
identity = 0.995
3'(0.995)5'
coverage = 1.000
EC number :
EC 2.7.1.37
InterPro :
IPR000719 : Protein kinase, catalytic domain
IPR002290 : Serine/threonine-protein kinase domain
IPR008271 : Serine/threonine-protein kinase, active site
IPR011009 : Protein kinase-like domain
IPR015748 : Mitogen activated protein kinase kinase kinase 3
IPR017442 : Serine/threonine-protein kinase-like domain
IPR020635 : Tyrosine-protein kinase, catalytic domain
GO :
0004672 : Molecular Function : protein kinase activity
0004674 : Molecular Function : protein serine/threonine kinase activity
0005524 : Molecular Function : ATP binding
0006468 : Biological Process : protein phosphorylation
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18.5, cyto_nucl 17, nucl 6.5, pero 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002473)
HIX0002473
HIT000042130
(
BC034417
)
(Similar to Uncharacterized protein; Fragment;)
genome : 135,738,285 - 135,741,049 (2,765)
query : 1 - 1,104 (1,104/1,135)
2 exons
identity = 0.999
3'(1.000;0.997)5'
coverage = 1.000
EC number :
EC 2.7.1.37
InterPro :
IPR000719 : Protein kinase, catalytic domain
IPR008271 : Serine/threonine-protein kinase, active site
IPR011009 : Protein kinase-like domain
IPR015748 : Mitogen activated protein kinase kinase kinase 3
IPR017442 : Serine/threonine-protein kinase-like domain
GO :
0004672 : Molecular Function : protein kinase activity
0004674 : Molecular Function : protein serine/threonine kinase activity
0005524 : Molecular Function : ATP binding
0006468 : Biological Process : protein phosphorylation
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15.5, cyto_nucl 14.5, nucl 6.5, cysk 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002473)
HIX0002473
HIT000476385 (
ENST00000392915
)
(Similar to SPS1/STE20-related protein kinase YSK4; EC=2.7.11.1; Regulated in COPD, protein kinase;)
genome : 135,738,284 - 135,781,219 (42,936)
query : 1 - 4,350 (4,350/4,350)
10 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18.5, cyto_nucl 13, cyto 6.5, mito 4,
E.R._mito 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002473)
HIX0002473
HIT000582896 (
ENST00000478805
)
(Similar to SPS1/STE20-related protein kinase YSK4; EC=2.7.11.1; Regulated in COPD, protein kinase;)
genome : 135,738,284 - 135,741,049 (2,766)
query : 1 - 1,105 (1,105/1,105)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.7.1.37
InterPro :
IPR000719 : Protein kinase, catalytic domain
IPR002290 : Serine/threonine-protein kinase domain
IPR008271 : Serine/threonine-protein kinase, active site
IPR011009 : Protein kinase-like domain
IPR015748 : Mitogen activated protein kinase kinase kinase 3
IPR017442 : Serine/threonine-protein kinase-like domain
IPR020635 : Tyrosine-protein kinase, catalytic domain
GO :
0004672 : Molecular Function : protein kinase activity
0004674 : Molecular Function : protein serine/threonine kinase activity
0005524 : Molecular Function : ATP binding
0006468 : Biological Process : protein phosphorylation
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18, cyto_nucl 15.3333, cyto_plas 10.1667,
nucl 7.5, pero 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002473)
HIX0002473
HIT000042808
(
AK122935
)
(Similar to SPS1/STE20-related protein kinase YSK4; EC=2.7.11.1; Regulated in COPD, protein kinase;)
genome : 135,738,286 - 135,781,219 (42,934)
query : 1 - 4,348 (4,348/4,348)
10 exons
identity = 0.998
3'(0.999;0.993;1.000;0.998;0.977;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18, cyto_nucl 13.5, cyto 7, mito 4,
E.R._mito 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002473)
HIX0002473
HIT000249504
(
AK131216
)
(Similar to SPS1/STE20-related protein kinase YSK4; EC=2.7.11.1; Regulated in COPD, protein kinase;)
genome : 135,738,286 - 135,744,611 (6,326)
query : 1 - 2,195 (2,195/2,195)
3 exons
identity = 1.000
3'(0.999;1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.7.1.37
InterPro :
IPR000719 : Protein kinase, catalytic domain
IPR002290 : Serine/threonine-protein kinase domain
IPR008271 : Serine/threonine-protein kinase, active site
IPR011009 : Protein kinase-like domain
IPR015748 : Mitogen activated protein kinase kinase kinase 3
IPR017441 : Protein kinase, ATP binding site
IPR017442 : Serine/threonine-protein kinase-like domain
IPR020635 : Tyrosine-protein kinase, catalytic domain
GO :
0004672 : Molecular Function : protein kinase activity
0004674 : Molecular Function : protein serine/threonine kinase activity
0005524 : Molecular Function : ATP binding
0006468 : Biological Process : protein phosphorylation
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19, nucl 11
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002473)
HIX0002473
HIT000535299 (
ENST00000437365
)
(Similar to SPS1/STE20-related protein kinase YSK4; EC=2.7.11.1; Regulated in COPD, protein kinase;)
genome : 135,738,286 - 135,744,611 (6,326)
query : 1 - 2,195 (2,195/2,195)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.7.1.37
InterPro :
IPR000719 : Protein kinase, catalytic domain
IPR002290 : Serine/threonine-protein kinase domain
IPR008271 : Serine/threonine-protein kinase, active site
IPR011009 : Protein kinase-like domain
IPR015748 : Mitogen activated protein kinase kinase kinase 3
IPR017441 : Protein kinase, ATP binding site
IPR017442 : Serine/threonine-protein kinase-like domain
IPR020635 : Tyrosine-protein kinase, catalytic domain
GO :
0004672 : Molecular Function : protein kinase activity
0004674 : Molecular Function : protein serine/threonine kinase activity
0005524 : Molecular Function : ATP binding
0006468 : Biological Process : protein phosphorylation
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19, nucl 11
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002473)
HIX0002473
HIT000476387 (
ENST00000392917
)
(Similar to Uncharacterized protein; Fragment;)
genome : 135,738,949 - 135,782,248 (43,300)
query : 1 - 3,393 (3,393/3,412)
9 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 0.994
InterPro :
IPR000719 : Protein kinase, catalytic domain
IPR011009 : Protein kinase-like domain
IPR015748 : Mitogen activated protein kinase kinase kinase 3
IPR017441 : Protein kinase, ATP binding site
IPR017442 : Serine/threonine-protein kinase-like domain
GO :
0004672 : Molecular Function : protein kinase activity
0004674 : Molecular Function : protein serine/threonine kinase activity
0005524 : Molecular Function : ATP binding
0006468 : Biological Process : protein phosphorylation
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16, cyto 13
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002473)
HIX0002473
HIT000022376
(
AK097522
)
(Conserved hypothetical protein.)
genome : 135,739,471 - 135,741,107 (1,637)
query : 1 - 1,638 (1,638/1,638)
1 exon
identity = 0.997
3'(0.997)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 14.6667, cyto 11, extr 10, nucl 10,
cyto_pero 7.66667
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002473)
HIX0002473
HIT000428320
(
AK309454
)
(Similar to SPS1/STE20-related protein kinase YSK4; EC=2.7.11.1; Regulated in COPD, protein kinase;)
genome : 135,748,911 - 135,805,038 (56,128)
query : 1 - 1,405 (1,405/1,405)
8 exons
identity = 0.999
3'(0.996;1.000;1.000;1.000;1.000;1.000;1.000;
0.996)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 20.5, cyto_nucl 14, cyto 6.5, extr 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002473)
HIX0002473
HIT000572735 (
ENST00000468155
)
(Similar to SPS1/STE20-related protein kinase YSK4; EC=2.7.11.1; Regulated in COPD, protein kinase;)
genome : 135,748,911 - 135,805,038 (56,128)
query : 1 - 1,405 (1,405/1,405)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 20.5, cyto_nucl 14, cyto 6.5, extr 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002473)
HIX0002473
HIT000523886 (
ENST00000425952
)
(Similar to SPS1/STE20-related protein kinase YSK4; EC=2.7.11.1; Regulated in COPD, protein kinase;)
genome : 135,756,491 - 135,780,946 (24,456)
query : 1 - 537 (537/537)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15.5, cyto_nucl 12.5, nucl 8.5, extr 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002473)
HIX0002473
HIT000512277 (
ENST00000414343
)
(Similar to SPS1/STE20-related protein kinase YSK4; EC=2.7.11.1; Regulated in COPD, protein kinase;)
genome : 135,779,284 - 135,805,028 (25,745)
query : 1 - 531 (531/541)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 0.982
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 13, nucl 13, cyto_nucl 10, cyto 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002473)
HIX0002473
HIT000589849 (
ENST00000486077
)
(Hypothetical short protein.)
genome : 135,787,922 - 135,805,013 (17,092)
query : 1 - 604 (604/604)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cysk 15, nucl 7.5, cyto_nucl 6.33333, extr 5, cyto 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002473)
HIX0002474
HIT000317093 (
NM_012233
)
(Rab3 GTPase-activating protein catalytic subunit isoform 2.)
genome : 135,809,835 - 135,928,280 (118,446)
query : 1 - 4,918 (4,918/4,918)
24 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 21, cyto 9
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002474)
HIX0002474
HIT000654917 (
NM_001172435
)
(Rab3 GTPase-activating protein catalytic subunit isoform 1.)
genome : 135,809,835 - 135,928,280 (118,446)
query : 1 - 4,939 (4,939/4,939)
25 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 22, cyto 8
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002474)
HIX0002474
HIT000109201 (
ENST00000264158
)
(Rab3 GTPase-activating protein catalytic subunit isoform 2.)
genome : 135,809,853 - 135,927,544 (117,692)
query : 1 - 4,164 (4,164/4,164)
24 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 21, cyto 9
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002474)
HIX0002474
HIT000005768
(
AK022494
)
(Rab3 GTPase-activating protein catalytic subunit; RAB3 GTPase-activating protein 130 kDa subunit; Rab3-GAP p130; Rab3-GAP;)
genome : 135,809,859 - 135,926,779 (116,921)
query : 1 - 3,389 (3,389/3,389)
24 exons
identity = 0.999
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17, cyto_nucl 15.5, nucl 12
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002474)
HIX0002474
HIT000435601
(
BC146809
)
(Similar to Rab3 GTPase-activating protein catalytic subunit; RAB3 GTPase-activating protein 130 kDa subunit; Rab3-GAP p130; Rab3-GAP;)
genome : 135,809,865 - 135,933,964 (124,100)
query : 1 - 3,717 (3,717/3,732)
29 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 11, extr 8, nucl 5.5, cyto_nucl 4.5, pero 4,
extr_plas 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002474)
HIX0002474
HIT000638538 (
ENST00000539493
)
(Similar to Rab3 GTPase-activating protein catalytic subunit; RAB3 GTPase-activating protein 130 kDa subunit; Rab3-GAP p130; Rab3-GAP;)
genome : 135,809,865 - 135,933,964 (124,100)
query : 1 - 3,717 (3,717/3,717)
29 exons
identity = 0.998
5'(1.000;1.000;1.000;0.962)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 11, extr 8, nucl 5.5, cyto_nucl 4.5, pero 4,
extr_plas 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002474)
HIX0002474
HIT000264431
(
BC071602
)
(Rab3 GTPase-activating protein catalytic subunit isoform 1.)
genome : 135,809,868 - 135,927,545 (117,678)
query : 1 - 4,171 (4,171/4,186)
25 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 22, cyto 8
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002474)
HIX0002474
HIT000539968 (
ENST00000442034
)
(Rab3 GTPase-activating protein catalytic subunit isoform 1.)
genome : 135,809,868 - 135,927,545 (117,678)
query : 1 - 4,171 (4,171/4,185)
25 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 22, cyto 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002474)
HIX0002474
HIT000523327 (
ENST00000425393
)
(Similar to Rab3 GTPase-activating protein catalytic subunit; RAB3 GTPase-activating protein 130 kDa subunit; Rab3-GAP p130; Rab3-GAP;)
genome : 135,809,869 - 135,816,636 (6,768)
query : 1 - 1,139 (1,139/1,139)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, cyto 12.5, cyto_nucl 7.5, extr_plas 7.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002474)
HIX0002474
HIT000042219
(
D31886
)
Representative transcript
(Rab3 GTPase-activating protein catalytic subunit isoform 2.)
genome : 135,809,998 - 135,927,038 (117,041)
query : 19 - 3,635 (3,617/3,635)
23 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 0.995
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 21, cyto 9
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002474)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK172881
Bos
sp. (Cow) : BC114755
Pongo
sp. (Orangutan) : CR857352
Danio
sp. (Zebrafish) : ENSDART00000059600
Macaca
sp. (Macaque) : ENSMMUT00000020520
Monodelphis
sp. (Opossum) : ENSMODT00000001012
Oryzias
sp. (Medaka) : ENSORLT00000018625
Tetraodon
sp. (Tetraodon) : GSTENT00010857001
Takifugu
sp. (Fugu) : SINFRUT00000146649
Pan
sp. (Chimpanzee) : XM_001153005
Equus
sp. (Horse) : XM_001489470
Gallus
sp. (Chicken) : XM_422135
Canis
sp. (Dog) : XM_851254
Rattus
sp. (Rat) : XR_005436
HIX0002474
HIT000487393
(
AB449877
)
(Rab3 GTPase-activating protein catalytic subunit isoform 2.)
genome : 135,809,998 - 135,926,351 (116,354)
query : 17 - 2,946 (2,930/2,946)
23 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 0.995
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 21, cyto 9
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002474)
HIX0002474
HIT000092261
(
BC030992
)
(Similar to Rab3 GTPase-activating protein catalytic subunit; RAB3 GTPase-activating protein 130 kDa subunit; Rab3-GAP p130; Rab3-GAP;)
genome : 135,809,999 - 135,816,629 (6,631)
query : 1 - 1,106 (1,106/1,136)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 19, cyto 8.5, cyto_nucl 5.5, cysk 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002474)
AC016725.5
135683655-135757625 F +
NCBI
AC020602.6
135757626-135843654 F +
NCBI