bases per tick :
500
200
100
50
20
10
5
2
kb first site :
main :
All Human Genes
JIGSAW prediction
ESTs assembly
homology :
UCSC
CCDS
Pseudogene.org
Conserved regions (
Segmental duplication
P.troglodytes
P.abelii
M.mulatta
M.musculus
R.norvegicus
C.familiaris
E.caballus
B.taurus
M.domestica
G.gallus
D.rerio
O.latipes
T.nigroviridis
T.rubripes
)
gene prediction :
FGENESH
GenScan
HMMgene
tRNA
show... :
SNPs
ESTs(summary)
ESTs(detail)
CAGE tag(summary)
CAGE tag(detail)
sequence viewer :
( start, end )
( middle, total length )
= (
,
)
HIX0000283
HIT000006765
(
AK023491
)
(Similar to Zinc transporter 2; ZnT-2; Solute carrier family 30 member 2;)
genome : 26,363,743 - 26,368,292 (4,550)
query : 1 - 2,291 (2,291/2,291)
3 exons
identity = 1.000
3'(1.000;0.990)5'
coverage = 1.000
InterPro :
IPR002524 : Cation efflux protein
GO :
0006812 : Biological Process : cation transport
0008324 : Molecular Function : cation transmembrane transporter activity
0016020 : Cellular Component : membrane
0055085 : Biological Process : transmembrane transport
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 28, pero 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000283)
HIX0000283
HIT000242965
(
AF370409
)
(Zinc transporter 2 isoform 1.)
genome : 26,364,513 - 26,372,476 (7,964)
query : 1 - 2,346 (2,346/2,371)
8 exons
identity = 0.999
3'(1.000;0.991;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR002524 : Cation efflux protein
GO :
0006812 : Biological Process : cation transport
0008324 : Molecular Function : cation transmembrane transporter activity
0016020 : Cellular Component : membrane
0055085 : Biological Process : transmembrane transport
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000283)
HIX0000283
HIT000210693 (
NM_032513
)
(Zinc transporter 2 isoform 2.)
genome : 26,364,514 - 26,372,604 (8,091)
query : 1 - 2,326 (2,326/2,326)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR002524 : Cation efflux protein
GO :
0006812 : Biological Process : cation transport
0008324 : Molecular Function : cation transmembrane transporter activity
0016020 : Cellular Component : membrane
0055085 : Biological Process : transmembrane transport
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000283)
HIX0000283
HIT000315900 (
NM_001004434
)
(Zinc transporter 2 isoform 1.)
genome : 26,364,514 - 26,372,604 (8,091)
query : 1 - 2,473 (2,473/2,473)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR002524 : Cation efflux protein
GO :
0006812 : Biological Process : cation transport
0008324 : Molecular Function : cation transmembrane transporter activity
0016020 : Cellular Component : membrane
0055085 : Biological Process : transmembrane transport
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 31
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000283)
HIX0000283
HIT000355556 (
ENST00000374276
)
(Zinc transporter 2 isoform 1.)
genome : 26,364,514 - 26,372,604 (8,091)
query : 1 - 2,473 (2,473/2,473)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR002524 : Cation efflux protein
GO :
0006812 : Biological Process : cation transport
0008324 : Molecular Function : cation transmembrane transporter activity
0016020 : Cellular Component : membrane
0055085 : Biological Process : transmembrane transport
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 31
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000283)
HIX0000283
HIT000355558 (
ENST00000374278
)
(Zinc transporter 2 isoform 2.)
genome : 26,364,514 - 26,372,604 (8,091)
query : 1 - 2,326 (2,326/2,326)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR002524 : Cation efflux protein
GO :
0006812 : Biological Process : cation transport
0008324 : Molecular Function : cation transmembrane transporter activity
0016020 : Cellular Component : membrane
0055085 : Biological Process : transmembrane transport
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000283)
HIX0000283
HIT000018884
(
AK094027
)
(Similar to Zinc transporter 2 isoform 1.)
genome : 26,364,514 - 26,372,445 (7,932)
query : 1 - 1,818 (1,818/1,818)
6 exons
identity = 0.990
3'(0.994;1.000;1.000;0.995;1.000)5'
coverage = 1.000
InterPro :
IPR002524 : Cation efflux protein
GO :
0006812 : Biological Process : cation transport
0008324 : Molecular Function : cation transmembrane transporter activity
0016020 : Cellular Component : membrane
0055085 : Biological Process : transmembrane transport
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000283)
HIX0000283
HIT000590470 (
ENST00000486732
)
(Similar to Zinc transporter 2; ZnT-2; Solute carrier family 30 member 2;)
genome : 26,364,514 - 26,372,445 (7,932)
query : 1 - 1,671 (1,671/1,671)
5 exons
identity = 0.991
3'(0.994;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR002524 : Cation efflux protein
GO :
0006812 : Biological Process : cation transport
0008324 : Molecular Function : cation transmembrane transporter activity
0016020 : Cellular Component : membrane
0055085 : Biological Process : transmembrane transport
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 31
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000283)
HIX0000283
HIT000006778
(
AK023504
)
(Similar to Zinc transporter 2; ZnT-2; Solute carrier family 30 member 2;)
genome : 26,364,514 - 26,366,404 (1,891)
query : 21 - 1,440 (1,420/1,440)
2 exons
identity = 0.999
3'(1.000)5'
coverage = 0.986
InterPro :
IPR002524 : Cation efflux protein
GO :
0006812 : Biological Process : cation transport
0008324 : Molecular Function : cation transmembrane transporter activity
0016020 : Cellular Component : membrane
0055085 : Biological Process : transmembrane transport
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 22, cyto_nucl 14.5, extr 3, nucl 3, mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000283)
HIX0000283
HIT000271999
(
CR592804
)
(Zinc transporter 2 isoform 1.)
genome : 26,364,538 - 26,372,597 (8,060)
query : 1 - 2,442 (2,442/2,442)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR002524 : Cation efflux protein
GO :
0006812 : Biological Process : cation transport
0008324 : Molecular Function : cation transmembrane transporter activity
0016020 : Cellular Component : membrane
0055085 : Biological Process : transmembrane transport
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000283)
HIX0000283
HIT000032705
(
BC006251
)
Representative transcript
(Zinc transporter 2 isoform 2.)
genome : 26,365,432 - 26,372,604 (7,173)
query : 1 - 1,408 (1,408/1,459)
7 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 0.999
InterPro :
IPR002524 : Cation efflux protein
GO :
0006812 : Biological Process : cation transport
0008324 : Molecular Function : cation transmembrane transporter activity
0016020 : Cellular Component : membrane
0055085 : Biological Process : transmembrane transport
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000283)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK031425
Rattus
sp. (Rat) : BC061997
Danio
sp. (Zebrafish) : ENSDART00000050474
Equus
sp. (Horse) : ENSECAT00000010989
Oryzias
sp. (Medaka) : ENSORLT00000011020
Pongo
sp. (Orangutan) : ENSPPYT00000002022
Tetraodon
sp. (Tetraodon) : GSTENT00035764001
Takifugu
sp. (Fugu) : SINFRUT00000176039
Macaca
sp. (Macaque) : XM_001108252
Monodelphis
sp. (Opossum) : XM_001369224
Monodelphis
sp. (Opossum) : XM_001369401
Pan
sp. (Chimpanzee) : XM_524624
Canis
sp. (Dog) : XM_535347
Bos
sp. (Cow) : XM_588317
Gallus
sp. (Chicken) : XR_027171
HIX0000283
HIT000515222 (
ENST00000417288
)
(Similar to Zinc transporter 2; ZnT-2; Solute carrier family 30 member 2;)
genome : 26,365,449 - 26,372,604 (7,156)
query : 1 - 1,045 (1,045/1,045)
6 exons
identity = 0.984
3'(0.970;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR002524 : Cation efflux protein
GO :
0006812 : Biological Process : cation transport
0008324 : Molecular Function : cation transmembrane transporter activity
0016020 : Cellular Component : membrane
0055085 : Biological Process : transmembrane transport
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 26, mito 2, E.R. 2, golg 2, E.R._mito 2,
E.R._golg 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000283)
HIX0000283
HIT000601301 (
ENST00000498060
)
(Similar to Zinc transporter 2 isoform 1.)
genome : 26,369,930 - 26,371,942 (2,013)
query : 1 - 715 (715/715)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR002524 : Cation efflux protein
GO :
0006812 : Biological Process : cation transport
0008324 : Molecular Function : cation transmembrane transporter activity
0016020 : Cellular Component : membrane
0055085 : Biological Process : transmembrane transport
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 27, mito 2, golg 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000283)
HIX0028986
HIT000066733
(
AF085854
)
Representative transcript
(Hypothetical short protein.)
genome : 26,374,743 - 26,375,359 (617)
query : 1 - 617 (617/626)
1 exon
identity = 0.998
5'(0.998)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 23, nucl 4, mito 3, cyto_nucl 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028986)
HIX0000284
HIT000078255
(
AF353673
)
(E3 ubiquitin-protein ligase TRIM63.)
genome : 26,377,797 - 26,394,104 (16,308)
query : 1 - 1,748 (1,748/1,791)
9 exons
identity = 0.999
3'(0.997;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 24, cyto 3, mito 2, cyto_pero 2, cyto_plas 2,
cyto_golg 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000284)
HIX0000284
HIT000265800
(
BC080529
)
(E3 ubiquitin-protein ligase TRIM63.)
genome : 26,377,797 - 26,394,103 (16,307)
query : 1 - 1,747 (1,747/1,764)
9 exons
identity = 0.999
3'(0.997;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
InterPro :
IPR000315 : Zinc finger, B-box
IPR001841 : Zinc finger, RING-type
IPR013083 : Zinc finger, RING/FYVE/PHD-type
IPR017903 : COS domain
IPR017907 : Zinc finger, RING-type, conserved site
IPR018957 : Zinc finger, C3HC4 RING-type
GO :
0005515 : Molecular Function : protein binding
0005622 : Cellular Component : intracellular
0008270 : Molecular Function : zinc ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 24, cyto 3, mito 2, cyto_pero 2, cyto_plas 2,
cyto_golg 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000284)
HIX0000284
HIT000246338
(
AJ276484
)
(E3 ubiquitin-protein ligase TRIM63.)
genome : 26,377,793 - 26,394,108 (16,316)
query : 1 - 1,756 (1,756/1,756)
9 exons
identity = 0.998
3'(0.995;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
InterPro :
IPR000315 : Zinc finger, B-box
IPR001841 : Zinc finger, RING-type
IPR013083 : Zinc finger, RING/FYVE/PHD-type
IPR017903 : COS domain
IPR017907 : Zinc finger, RING-type, conserved site
IPR018957 : Zinc finger, C3HC4 RING-type
GO :
0005515 : Molecular Function : protein binding
0005622 : Cellular Component : intracellular
0008270 : Molecular Function : zinc ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 24, cyto 3, mito 2, cyto_pero 2, cyto_plas 2,
cyto_golg 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000284)
HIX0000284
HIT000078395
(
AF361946
)
(Similar to E3 ubiquitin-protein ligase TRIM63.)
genome : 26,377,798 - 26,394,927 (17,130)
query : 2 - 1,903 (1,902/1,903)
4 exons
identity = 0.964
3'(0.941;0.933;0.994;0.974)5'
coverage = 0.999
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19, mito 3.5, cyto 3, E.R._mito 2.5,
cyto_plas 2.5, plas 2, extr 2, extr_plas 2, cyto_pero 2, cyto_golg 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000284)
HIX0000284
HIT000013556
(
AK056942
)
Representative transcript
(E3 ubiquitin-protein ligase TRIM63.)
genome : 26,377,798 - 26,394,121 (16,324)
query : 1 - 1,764 (1,764/1,764)
9 exons
identity = 0.998
3'(0.997;1.000;1.000;1.000;1.000;1.000;1.000;
0.994;1.000)5'
coverage = 1.000
InterPro :
IPR000315 : Zinc finger, B-box
IPR001841 : Zinc finger, RING-type
IPR013083 : Zinc finger, RING/FYVE/PHD-type
IPR017903 : COS domain
IPR017907 : Zinc finger, RING-type, conserved site
IPR018957 : Zinc finger, C3HC4 RING-type
GO :
0005515 : Molecular Function : protein binding
0005622 : Cellular Component : intracellular
0008270 : Molecular Function : zinc ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 24, cyto 3, mito 2, cyto_pero 2, cyto_plas 2,
cyto_golg 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000284)
Ortholog candidate ( ->
Evola
)
Danio
sp. (Zebrafish) : BC049414
Rattus
sp. (Rat) : BC061824
Danio
sp. (Zebrafish) : BC075897
Bos
sp. (Cow) : BC112721
Gallus
sp. (Chicken) : BX931246
Tetraodon
sp. (Tetraodon) : CR670382
Mus
sp. (Mouse) : DQ229108
Oryzias
sp. (Medaka) : ENSORLT00000010271
Pongo
sp. (Orangutan) : ENSPPYT00000002021
Takifugu
sp. (Fugu) : SINFRUT00000155215
Macaca
sp. (Macaque) : XM_001108306
Monodelphis
sp. (Opossum) : XM_001369455
Equus
sp. (Horse) : XM_001500939
Pan
sp. (Chimpanzee) : XM_524625
Canis
sp. (Dog) : XM_544488
HIX0000284
HIT000210749 (
NM_032588
)
(E3 ubiquitin-protein ligase TRIM63.)
genome : 26,377,798 - 26,394,121 (16,324)
query : 1 - 1,764 (1,764/1,764)
9 exons
identity = 0.999
3'(0.997;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
InterPro :
IPR000315 : Zinc finger, B-box
IPR001841 : Zinc finger, RING-type
IPR013083 : Zinc finger, RING/FYVE/PHD-type
IPR017903 : COS domain
IPR017907 : Zinc finger, RING-type, conserved site
IPR018957 : Zinc finger, C3HC4 RING-type
GO :
0005515 : Molecular Function : protein binding
0005622 : Cellular Component : intracellular
0008270 : Molecular Function : zinc ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 24, cyto 3, mito 2, cyto_pero 2, cyto_plas 2,
cyto_golg 2
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000284)
HIX0000284
HIT000355552 (
ENST00000374272
)
(E3 ubiquitin-protein ligase TRIM63.)
genome : 26,377,798 - 26,394,121 (16,324)
query : 1 - 1,764 (1,764/1,764)
9 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
InterPro :
IPR000315 : Zinc finger, B-box
IPR001841 : Zinc finger, RING-type
IPR013083 : Zinc finger, RING/FYVE/PHD-type
IPR017903 : COS domain
IPR017907 : Zinc finger, RING-type, conserved site
IPR018957 : Zinc finger, C3HC4 RING-type
GO :
0005515 : Molecular Function : protein binding
0005622 : Cellular Component : intracellular
0008270 : Molecular Function : zinc ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 24, cyto 3, mito 2, cyto_pero 2, cyto_plas 2,
cyto_golg 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000284)
HIX0000284
HIT000492444
(
AK297820
)
(E3 ubiquitin-protein ligase TRIM63.)
genome : 26,378,142 - 26,394,121 (15,980)
query : 1 - 1,336 (1,336/1,336)
9 exons
identity = 0.992
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.936;1.000)5'
coverage = 1.000
InterPro :
IPR001841 : Zinc finger, RING-type
IPR013083 : Zinc finger, RING/FYVE/PHD-type
IPR017903 : COS domain
IPR017907 : Zinc finger, RING-type, conserved site
IPR018957 : Zinc finger, C3HC4 RING-type
GO :
0005515 : Molecular Function : protein binding
0008270 : Molecular Function : zinc ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23, cyto 3, mito 2, cyto_pero 2, cyto_plas 2,
cyto_golg 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000284)
HIX0000284
HIT000037272
(
BC015717
)
(Similar to E3 ubiquitin-protein ligase TRIM63.)
genome : 26,383,664 - 26,394,106 (10,443)
query : 1 - 1,129 (1,129/1,198)
7 exons
identity = 0.988
3'(0.916;1.000;0.996;1.000;1.000;1.000;1.000)5'
coverage = 0.954
InterPro :
IPR000315 : Zinc finger, B-box
IPR001841 : Zinc finger, RING-type
IPR013083 : Zinc finger, RING/FYVE/PHD-type
IPR017903 : COS domain
IPR017907 : Zinc finger, RING-type, conserved site
IPR018957 : Zinc finger, C3HC4 RING-type
GO :
0005515 : Molecular Function : protein binding
0005622 : Cellular Component : intracellular
0008270 : Molecular Function : zinc ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 24, cyto 3, mito 2, cyto_pero 2, cyto_plas 2,
cyto_golg 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000284)
HIX0000284
HIT000100293
(
BT007373
)
(Similar to E3 ubiquitin-protein ligase TRIM63.)
genome : 26,383,664 - 26,393,985 (10,322)
query : 1 - 1,008 (1,008/1,041)
7 exons
identity = 0.986
3'(0.916;1.000;0.996;1.000;1.000;1.000;1.000)5'
coverage = 0.968
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 24, cyto 3, mito 2, cyto_pero 2, cyto_plas 2,
cyto_golg 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000284)
HIX0000284
HIT000586958 (
ENST00000483052
)
(Similar to E3 ubiquitin-protein ligase TRIM63.)
genome : 26,387,735 - 26,394,927 (7,193)
query : 1 - 1,365 (1,365/1,365)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR001841 : Zinc finger, RING-type
IPR013083 : Zinc finger, RING/FYVE/PHD-type
IPR017907 : Zinc finger, RING-type, conserved site
IPR018957 : Zinc finger, C3HC4 RING-type
GO :
0005515 : Molecular Function : protein binding
0008270 : Molecular Function : zinc ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 21, plas 3, cyto 3, cyto_plas 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0000284)
AL391650.18
26366360-26406359 F +
NCBI