bases per tick :
500
200
100
50
20
10
5
2
kb first site :
main :
All Human Genes
JIGSAW prediction
ESTs assembly
homology :
UCSC
CCDS
Pseudogene.org
Conserved regions (
Segmental duplication
P.troglodytes
P.abelii
M.mulatta
M.musculus
R.norvegicus
C.familiaris
E.caballus
B.taurus
M.domestica
G.gallus
D.rerio
O.latipes
T.nigroviridis
T.rubripes
)
gene prediction :
FGENESH
GenScan
HMMgene
tRNA
show... :
SNPs
ESTs(summary)
ESTs(detail)
CAGE tag(summary)
CAGE tag(detail)
sequence viewer :
( start, end )
( middle, total length )
= (
,
)
HIX0200070
HIT000383276
(
AB065611
)
Representative transcript
(Olfactory receptor 2T27.)
genome : 248,813,032 - 248,814,385 (1,354)
query : 1 - 1,354 (1,354/1,354)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
InterPro :
IPR000276 : 7TM GPCR, rhodopsin-like
IPR000725 : Olfactory receptor
IPR017452 : GPCR, rhodopsin-like superfamily
GO :
0004984 : Molecular Function : olfactory receptor activity
0007186 : Biological Process : G-protein coupled receptor protein signaling pathway
0016021 : Cellular Component : integral to membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200070)
Ortholog candidate ( ->
Evola
)
Danio
sp. (Zebrafish) : ENSDART00000076980
Tetraodon
sp. (Tetraodon) : GSTENT00035886001
Pan
sp. (Chimpanzee) : XM_001141170
Monodelphis
sp. (Opossum) : XM_001364123
Canis
sp. (Dog) : XM_539358
Bos
sp. (Cow) : XM_593313
HIX0200070
HIT000137519 (
ENST00000344889
)
(Olfactory receptor 2T27.)
genome : 248,813,232 - 248,814,185 (954)
query : 1 - 954 (954/954)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
InterPro :
IPR000276 : 7TM GPCR, rhodopsin-like
IPR000725 : Olfactory receptor
IPR017452 : GPCR, rhodopsin-like superfamily
GO :
0004984 : Molecular Function : olfactory receptor activity
0007186 : Biological Process : G-protein coupled receptor protein signaling pathway
0016021 : Cellular Component : integral to membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200070)
HIX0200070
HIT000315518 (
NM_001001824
)
(Olfactory receptor 2T27.)
genome : 248,813,232 - 248,814,185 (954)
query : 1 - 954 (954/954)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
InterPro :
IPR000276 : 7TM GPCR, rhodopsin-like
IPR000725 : Olfactory receptor
IPR017452 : GPCR, rhodopsin-like superfamily
GO :
0004984 : Molecular Function : olfactory receptor activity
0007186 : Biological Process : G-protein coupled receptor protein signaling pathway
0016021 : Cellular Component : integral to membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200070)
AC098483.2
248805708-248821707 F +
NCBI
MER44C
MIR
(AGGTG)n
MER4A
MER4A
Charlie17a
THE1B
MER44C
MER33
AT_rich
Arthur1
LTR23
L1MB4
LTR3B_
HERVK3-int