bases per tick :
500
200
100
50
20
10
5
2
kb first site :
main :
All Human Genes
JIGSAW prediction
ESTs assembly
homology :
UCSC
CCDS
Pseudogene.org
Conserved regions (
Segmental duplication
P.troglodytes
P.abelii
M.mulatta
M.musculus
R.norvegicus
C.familiaris
E.caballus
B.taurus
M.domestica
G.gallus
D.rerio
O.latipes
T.nigroviridis
T.rubripes
)
gene prediction :
FGENESH
GenScan
HMMgene
tRNA
show... :
SNPs
ESTs(summary)
ESTs(detail)
CAGE tag(summary)
CAGE tag(detail)
sequence viewer :
( start, end )
( middle, total length )
= (
,
)
HIX0001257
HIT000096657
(
BC041382
)
(Similar to Carboxyl-terminal PDZ ligand of neuronal nitric oxide synthase protein isoform 2.)
genome : 162,039,566 - 162,338,229 (298,664)
query : 3 - 2,882 (2,880/2,897)
10 exons
identity = 0.998
5'(0.999)3'
coverage = 0.999
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 18, cyto_nucl 6.83333, nucl 5.5, cyto 5,
cyto_pero 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001257)
HIX0001257
HIT000630017 (
ENST00000530878
)
(Carboxyl-terminal PDZ ligand of neuronal nitric oxide synthase protein isoform 3.)
genome : 162,039,564 - 162,338,229 (298,666)
query : 1 - 2,882 (2,882/2,894)
10 exons
identity = 1.000
5'(1.000)3'
coverage = 1.000
InterPro :
IPR006020 : Phosphotyrosine interaction domain
IPR011993 : Pleckstrin homology-type
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 25.5, cyto_nucl 16.5, cyto 6.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001257)
HIX0001257
HIT000315148 (
ENST00000361897
)
(Carboxyl-terminal PDZ ligand of neuronal nitric oxide synthase protein isoform 1.)
genome : 162,039,581 - 162,339,813 (300,233)
query : 1 - 4,464 (4,464/4,464)
10 exons
identity = 1.000
5'(1.000)3'
coverage = 1.000
InterPro :
IPR006020 : Phosphotyrosine interaction domain
IPR011993 : Pleckstrin homology-type
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 25.5, cyto_nucl 16.5, cyto 6.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001257)
HIX0001257
HIT000317143 (
NM_014697
)
(Carboxyl-terminal PDZ ligand of neuronal nitric oxide synthase protein isoform 1.)
genome : 162,039,581 - 162,339,813 (300,233)
query : 1 - 4,464 (4,464/4,464)
10 exons
identity = 1.000
5'(1.000)3'
coverage = 1.000
InterPro :
IPR006020 : Phosphotyrosine interaction domain
IPR011993 : Pleckstrin homology-type
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 25.5, cyto_nucl 16.5, cyto 6.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001257)
HIX0001257
HIT000654108 (
NM_001164757
)
(Carboxyl-terminal PDZ ligand of neuronal nitric oxide synthase protein isoform 3.)
genome : 162,039,581 - 162,339,813 (300,233)
query : 1 - 4,449 (4,449/4,449)
10 exons
identity = 1.000
5'(1.000)3'
coverage = 1.000
InterPro :
IPR006020 : Phosphotyrosine interaction domain
IPR011993 : Pleckstrin homology-type
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 25.5, cyto_nucl 16.5, cyto 6.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001257)
HIX0001257
HIT000000181
(
AB007933
)
Representative transcript
(Carboxyl-terminal PDZ ligand of neuronal nitric oxide synthase protein isoform 1.)
genome : 162,039,581 - 162,338,228 (298,648)
query : 1 - 2,879 (2,879/2,879)
10 exons
identity = 1.000
5'(1.000)3'
coverage = 1.000
InterPro :
IPR006020 : Phosphotyrosine interaction domain
IPR011993 : Pleckstrin homology-type
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 25.5, cyto_nucl 16.5, cyto 6.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001257)
Ortholog candidate ( ->
Evola
)
Rattus
sp. (Rat) : AF037071
Mus
sp. (Mouse) : AK018149
Danio
sp. (Zebrafish) : BC091560
Gallus
sp. (Chicken) : CR406461
Gallus
sp. (Chicken) : ENSGALT00000004341
Oryzias
sp. (Medaka) : ENSORLT00000013634
Pongo
sp. (Orangutan) : ENSPPYT00000000713
Tetraodon
sp. (Tetraodon) : GSTENT00014377001
Tetraodon
sp. (Tetraodon) : GSTENT00015683001
Takifugu
sp. (Fugu) : SINFRUT00000131346
Takifugu
sp. (Fugu) : SINFRUT00000158489
Macaca
sp. (Macaque) : XM_001115782
Monodelphis
sp. (Opossum) : XM_001369654
Equus
sp. (Horse) : XM_001491537
Danio
sp. (Zebrafish) : XM_001919779
Canis
sp. (Dog) : XM_846744
Pan
sp. (Chimpanzee) : XR_024316
Bos
sp. (Cow) : XR_027948
HIX0001257
HIT000340424
(
BC112295
)
(Carboxyl-terminal PDZ ligand of neuronal nitric oxide synthase protein isoform 1.)
genome : 162,039,880 - 162,337,282 (297,403)
query : 1 - 1,634 (1,634/1,634)
10 exons
identity = 1.000
5'(1.000)3'
coverage = 1.000
InterPro :
IPR006020 : Phosphotyrosine interaction domain
IPR011993 : Pleckstrin homology-type
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 25.5, cyto_nucl 16.5, cyto 6.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001257)
HIX0001257
HIT000502214
(
BC143771
)
(Carboxyl-terminal PDZ ligand of neuronal nitric oxide synthase protein isoform 3.)
genome : 162,039,880 - 162,337,282 (297,403)
query : 1 - 1,619 (1,619/1,619)
10 exons
identity = 1.000
5'(1.000)3'
coverage = 1.000
InterPro :
IPR006020 : Phosphotyrosine interaction domain
IPR011993 : Pleckstrin homology-type
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 25.5, cyto_nucl 16.5, cyto 6.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001257)
HIX0001257
HIT000502223
(
BC143780
)
(Carboxyl-terminal PDZ ligand of neuronal nitric oxide synthase protein; C-terminal PDZ ligand of neuronal nitric oxide synthase protein; Nitric oxide synthase 1 adaptor protein;)
genome : 162,039,880 - 162,337,282 (297,403)
query : 1 - 1,732 (1,732/1,732)
11 exons
identity = 0.997
5'(1.000)3'
coverage = 1.000
InterPro :
IPR006020 : Phosphotyrosine interaction domain
IPR011993 : Pleckstrin homology-type
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 8.5, cyto_mito 7.66667, mito_pero 7.33333,
pero 7, mito 5.5, nucl 5, plas 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001257)
HIX0001257
HIT000332414
(
AY841899
)
(Carboxyl-terminal PDZ ligand of neuronal nitric oxide synthase protein isoform 2.)
genome : 162,332,773 - 162,339,813 (7,041)
query : 1 - 5,559 (5,559/5,559)
2 exons
identity = 0.999
5'(0.999)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 24, nucl 4.5, cyto_nucl 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001257)
HIX0001257
HIT000486132 (
NM_001126060
)
(Carboxyl-terminal PDZ ligand of neuronal nitric oxide synthase protein isoform 2.)
genome : 162,332,773 - 162,339,813 (7,041)
query : 1 - 5,559 (5,559/5,559)
2 exons
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 24, nucl 4.5, cyto_nucl 3.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001257)
HIX0001257
HIT000528054 (
ENST00000430120
)
(Carboxyl-terminal PDZ ligand of neuronal nitric oxide synthase protein; C-terminal PDZ ligand of neuronal nitric oxide synthase protein; Nitric oxide synthase 1 adaptor protein;)
genome : 162,332,773 - 162,339,813 (7,041)
query : 1 - 5,559 (5,559/5,559)
2 exons
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16, cyto_nucl 13.5, cyto 9, extr 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001257)
HIX0001257
HIT000596600 (
ENST00000493151
)
(Carboxyl-terminal PDZ ligand of neuronal nitric oxide synthase protein isoform 2.)
genome : 162,332,773 - 162,339,813 (7,041)
query : 1 - 5,559 (5,559/5,559)
2 exons
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 24, nucl 4.5, cyto_nucl 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001257)
HIX0001257
HIT000529630 (
ENST00000431696
)
(Similar to Uncharacterized protein C1orf226;)
genome : 162,335,197 - 162,351,905 (16,709)
query : 1 - 541 (541/541)
3 exons
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20.5, cyto_nucl 14.5, nucl 7.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001257)
HIX0001257
HIT000063356
(
AF037070
)
(Similar to Carboxyl-terminal PDZ ligand of neuronal nitric oxide synthase protein; C-terminal PDZ ligand of neuronal nitric oxide synthase protein; Nitric oxide synthase 1 adaptor protein;)
genome : 162,335,314 - 162,338,229 (2,916)
query : 1 - 1,434 (1,434/1,474)
2 exons
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 14.5, cyto 13, nucl 12, extr 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001257)
HIX0001257
HIT000552627 (
ENST00000454693
)
(Similar to Carboxyl-terminal PDZ ligand of neuronal nitric oxide synthase protein; C-terminal PDZ ligand of neuronal nitric oxide synthase protein; Nitric oxide synthase 1 adaptor protein;)
genome : 162,336,694 - 162,337,309 (616)
query : 1 - 497 (497/497)
2 exons
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 16, extr 6, cyto_nucl 6, nucl 5, cyto 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001257)
HIX0001257
HIT000518154 (
ENST00000420220
)
(Similar to Uncharacterized protein C1orf226;)
genome : 162,336,698 - 162,353,167 (16,470)
query : 1 - 702 (702/702)
4 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001257)
HIX0001257
HIT000349212 (
ENST00000367932
)
(Similar to Uncharacterized protein C1orf226;)
genome : 162,337,102 - 162,353,321 (16,220)
query : 1 - 830 (830/830)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 27.5, cyto_nucl 15.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001257)
HIX0001259
HIT000318666 (
NM_182581
)
(Similar to Uncharacterized protein;)
genome : 162,343,515 - 162,346,644 (3,130)
query : 1 - 1,173 (1,173/1,173)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 13, cyto_nucl 9, nucl 8, cyto 6, mito 2, lyso 2
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001259)
HIX0001259
HIT000349215 (
ENST00000367935
)
(Similar to Uncharacterized protein;)
genome : 162,343,515 - 162,346,644 (3,130)
query : 1 - 1,173 (1,173/1,173)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 22, nucl 10
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001259)
HIX0001259
HIT000041749
(
BC032957
)
Representative transcript
(Similar to Uncharacterized protein;)
genome : 162,343,807 - 162,346,647 (2,841)
query : 5 - 888 (884/907)
3 exons
identity = 0.997
3'(0.997;1.000;0.994)5'
coverage = 0.991
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 13, cyto_nucl 9, nucl 8, cyto 6, mito 2, lyso 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001259)
Ortholog candidate ( ->
Evola
)
Macaca
sp. (Macaque) : AB168799
Mus
sp. (Mouse) : AK005990
Bos
sp. (Cow) : BC110262
Canis
sp. (Dog) : ENSCAFT00000036623
Equus
sp. (Horse) : ENSECAT00000017266
Monodelphis
sp. (Opossum) : ENSMODT00000001236
Pongo
sp. (Orangutan) : ENSPPYT00000000712
Rattus
sp. (Rat) : XM_001076814
Gallus
sp. (Chicken) : XM_422214
HIX0001259
HIT000251191
(
AY248900
)
(Similar to Uncharacterized protein;)
genome : 162,343,864 - 162,346,622 (2,759)
query : 1 - 804 (804/804)
3 exons
identity = 0.996
3'(0.996;1.000;0.993)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 11, nucl 11, cyto_nucl 10.5, cyto 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001259)
HIX0001259
HIT000596702 (
ENST00000493255
)
(Similar to Uncharacterized protein;)
genome : 162,344,234 - 162,346,598 (2,365)
query : 1 - 447 (447/447)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 27, cyto 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001259)
HIX0001257
HIT000488531
(
AK293907
)
(Uncharacterized protein C1orf226;)
genome : 162,348,696 - 162,353,501 (4,806)
query : 1 - 984 (984/984)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 14, cyto 11, extr 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001257)
HIX0001257
HIT000560092 (
NM_001135240
)
(Uncharacterized protein C1orf226;)
genome : 162,348,696 - 162,353,501 (4,806)
query : 1 - 984 (984/984)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 14, cyto 11, extr 5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001257)
HIX0001257
HIT000524131 (
ENST00000426197
)
(Uncharacterized protein C1orf226;)
genome : 162,348,704 - 162,356,608 (7,905)
query : 1 - 4,083 (4,083/4,083)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 13, extr 10, cyto_nucl 5.83333, nucl 5.5, cyto 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001257)
HIX0001257
HIT000398308 (
NM_001085375
)
(Uncharacterized protein C1orf226;)
genome : 162,351,520 - 162,356,608 (5,089)
query : 1 - 4,126 (4,126/4,146)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001257)
HIX0001257
HIT000556560 (
ENST00000458626
)
(Uncharacterized protein C1orf226;)
genome : 162,351,520 - 162,356,608 (5,089)
query : 1 - 4,126 (4,126/4,126)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001257)
HIX0001257
HIT000044995
(
AK125122
)
(Uncharacterized protein C1orf226;)
genome : 162,351,520 - 162,356,600 (5,081)
query : 1 - 4,114 (4,114/4,114)
2 exons
identity = 0.998
5'(0.998;0.998)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001257)
HIX0001257
HIT000389370
(
BC127743
)
(Uncharacterized protein C1orf226;)
genome : 162,351,650 - 162,353,523 (1,874)
query : 1 - 911 (911/911)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001257)
HIX0001257
HIT000389371
(
BC127744
)
(Uncharacterized protein C1orf226;)
genome : 162,351,653 - 162,353,523 (1,871)
query : 1 - 908 (908/908)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001257)
AL512785.7
162337081-162353080 F +
NCBI
(A)n
(TG)n
MER20
AluJb
AluJb
MIRb
MER5A
MER5A1
AluSq2
L1MC4
AluSx1
L1MC4
MIR3
L2b
L2c
MIRc
MIRb
MER5B