bases per tick :
500
200
100
50
20
10
5
2
kb first site :
main :
All Human Genes
JIGSAW prediction
ESTs assembly
homology :
UCSC
CCDS
Pseudogene.org
Conserved regions (
Segmental duplication
P.troglodytes
P.abelii
M.mulatta
M.musculus
R.norvegicus
C.familiaris
E.caballus
B.taurus
M.domestica
G.gallus
D.rerio
O.latipes
T.nigroviridis
T.rubripes
)
gene prediction :
FGENESH
GenScan
HMMgene
tRNA
show... :
SNPs
ESTs(summary)
ESTs(detail)
CAGE tag(summary)
CAGE tag(detail)
sequence viewer :
( start, end )
( middle, total length )
= (
,
)
HIX0029714
HIT000383292
(
AB065633
)
Representative transcript
(Olfactory receptor 6K3; Olfactory receptor OR1-18;)
genome : 158,686,758 - 158,688,105 (1,348)
query : 1 - 1,348 (1,348/1,348)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
InterPro :
IPR000276 : 7TM GPCR, rhodopsin-like
IPR000725 : Olfactory receptor
IPR015545 : Olfactory receptor MOR105-like
IPR017452 : GPCR, rhodopsin-like superfamily
GO :
0004984 : Molecular Function : olfactory receptor activity
0007186 : Biological Process : G-protein coupled receptor protein signaling pathway
0016021 : Cellular Component : integral to membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029714)
Ortholog candidate ( ->
Evola
)
Macaca
sp. (Macaque) : ENSMMUT00000001053
Pongo
sp. (Orangutan) : ENSPPYT00000000811
Takifugu
sp. (Fugu) : SINFRUT00000157008
Pan
sp. (Chimpanzee) : XM_001149465
Monodelphis
sp. (Opossum) : XM_001379767
Equus
sp. (Horse) : XM_001915359
Canis
sp. (Dog) : XM_848081
HIX0029714
HIT000349426 (
ENST00000368146
)
(Olfactory receptor 6K3; Olfactory receptor OR1-18;)
genome : 158,686,958 - 158,687,953 (996)
query : 1 - 996 (996/996)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
InterPro :
IPR000276 : 7TM GPCR, rhodopsin-like
IPR000725 : Olfactory receptor
IPR015545 : Olfactory receptor MOR105-like
IPR017452 : GPCR, rhodopsin-like superfamily
GO :
0004984 : Molecular Function : olfactory receptor activity
0007186 : Biological Process : G-protein coupled receptor protein signaling pathway
0016021 : Cellular Component : integral to membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029714)
HIX0029714
HIT000316121 (
NM_001005327
)
(Olfactory receptor 6K3.)
genome : 158,686,958 - 158,687,905 (948)
query : 1 - 948 (948/948)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
InterPro :
IPR000276 : 7TM GPCR, rhodopsin-like
IPR000725 : Olfactory receptor
IPR015545 : Olfactory receptor MOR105-like
IPR017452 : GPCR, rhodopsin-like superfamily
GO :
0004984 : Molecular Function : olfactory receptor activity
0007186 : Biological Process : G-protein coupled receptor protein signaling pathway
0016021 : Cellular Component : integral to membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029714)
HIX0029714
HIT000349425 (
ENST00000368145
)
(Olfactory receptor 6K3.)
genome : 158,686,958 - 158,687,905 (948)
query : 1 - 948 (948/948)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
InterPro :
IPR000276 : 7TM GPCR, rhodopsin-like
IPR000725 : Olfactory receptor
IPR015545 : Olfactory receptor MOR105-like
IPR017452 : GPCR, rhodopsin-like superfamily
GO :
0004984 : Molecular Function : olfactory receptor activity
0007186 : Biological Process : G-protein coupled receptor protein signaling pathway
0016021 : Cellular Component : integral to membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029714)
HIX0200132
HIT000383291
(
AB065632
)
Representative transcript
(Similar to Olfactory receptor 424; Olfactory receptor MOR105-2; Olfactory receptor Olfr424;)
genome : 158,693,703 - 158,695,102 (1,400)
query : 1 - 1,400 (1,400/1,400)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 18, cyto 11, cyto_nucl 9, extr_plas 9
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200132)
HIX0029603
HIT000124326 (
ENST00000325769
)
Representative transcript
(7TM GPCR, rhodopsin-like family protein.)
genome : 158,693,903 - 158,694,902 (1,000)
query : 1 - 939 (939/939)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
InterPro :
IPR000276 : 7TM GPCR, rhodopsin-like
IPR000725 : Olfactory receptor
IPR015545 : Olfactory receptor MOR105-like
IPR017452 : GPCR, rhodopsin-like superfamily
GO :
0004984 : Molecular Function : olfactory receptor activity
0007186 : Biological Process : G-protein coupled receptor protein signaling pathway
0016021 : Cellular Component : integral to membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029603)
HIX0029603
HIT000521113 (
ENST00000423179
)
(7TM GPCR, rhodopsin-like family protein.)
genome : 158,693,903 - 158,694,857 (955)
query : 1 - 955 (955/955)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
InterPro :
IPR000276 : 7TM GPCR, rhodopsin-like
IPR000725 : Olfactory receptor
IPR015545 : Olfactory receptor MOR105-like
IPR017452 : GPCR, rhodopsin-like superfamily
GO :
0004984 : Molecular Function : olfactory receptor activity
0007186 : Biological Process : G-protein coupled receptor protein signaling pathway
0016021 : Cellular Component : integral to membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 30
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029603)
AL513205.8
158679431-158695430 F +
NCBI
L1PA3
AT_rich
L1M5
L1MA2
L1ME5
THE1D
L1MEg1
(CA)n
Tigger11a
(TC)n
AluSq2
AT_rich
AT_rich
MIR
L2c
AT_rich
L2c
MIR
MIR
L2c
(ATG)n
L1MEd
(TC)n
(TCTA)n
MIR
L2a