bases per tick :
2000
1000
500
200
100
50
20
10
5
2
kb first site :
homology :
G.gallus
sequence viewer :
( start, end )
( middle, total length )
= (
,
)
XM_424848
Representative transcript
genome : 2,559,040 - 2,564,126 (5,087)
query : 1 - 560 (560/560)
5 exons
identity = 1.000
3'(1.000)5'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
Ortholog candidate
H.sapiens
(Human) : HIT000033672
Macaca
sp. (Macaque) : XM_001095757
Mus
sp. (Mouse) : AB039933
Rattus
sp. (Rat) : BC083830
Canis
sp. (Dog) : XM_850031
Equus
sp. (Horse) : XM_001915677
Monodelphis
sp. (Opossum) : XM_001373034
Danio
sp. (Zebrafish) : BC081377
Oryzias
sp. (Medaka) : ENSORLT00000016523
Tetraodon
sp. (Tetraodon) : GSTENT00004304001
Takifugu
sp. (Fugu) : SINFRUT00000164924
Takifugu
sp. (Fugu) : SINFRUT00000165255
ENSGALT00000041053
Representative transcript
genome : 2,567,386 - 2,570,672 (3,287)
query : 1 - 1,335 (1,335/1,335)
11 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
Ortholog candidate
H.sapiens
(Human) : HIT000496644
Pongo
sp. (Orangutan) : ENSPPYT00000010875
Macaca
sp. (Macaque) : XM_001117391
Mus
sp. (Mouse) : AK028819
Canis
sp. (Dog) : XM_542200
Equus
sp. (Horse) : ENSECAT00000009907
Monodelphis
sp. (Opossum) : XM_001372998
Danio
sp. (Zebrafish) : ENSDART00000073910
Oryzias
sp. (Medaka) : ENSORLT00000000215
XM_418228
Representative transcript
genome : 2,570,961 - 2,573,068 (2,108)
query : 1 - 1,008 (1,008/1,008)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
ENSGALT00000035428
genome : 2,570,961 - 2,572,802 (1,842)
query : 1 - 742 (742/742)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
XM_429734
Representative transcript
genome : 2,573,262 - 2,574,490 (1,229)
query : 1 - 969 (969/969)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
ENSGALT00000004581
genome : 2,573,264 - 2,574,432 (1,169)
query : 1 - 910 (910/910)
4 exons
identity = 0.998
3'(1.000;0.986;0.990;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
CR391510
genome : 2,575,405 - 2,581,276 (5,872)
query : 1 - 1,970 (1,970/1,970)
6 exons
identity = 0.999
3'(0.999)5'
coverage = 1.000
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
AJ851822
Representative transcript
genome : 2,575,646 - 2,599,508 (23,863)
query : 54 - 2,411 (2,358/2,428)
10 exons
identity = 0.997
3'(1.000)5'
coverage = 0.977
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
Ortholog candidate
H.sapiens
(Human) : HIT000035373
Pan
sp. (Chimpanzee) : XM_512527
Pongo
sp. (Orangutan) : ENSPPYT00000011369
Macaca
sp. (Macaque) : XR_014384
Mus
sp. (Mouse) : AK089074
Rattus
sp. (Rat) : BC089902
Canis
sp. (Dog) : XM_541922
Equus
sp. (Horse) : ENSECAT00000013564
Bos
sp. (Cow) : BC151316
Monodelphis
sp. (Opossum) : XM_001362488
Danio
sp. (Zebrafish) : BC067707
Oryzias
sp. (Medaka) : ENSORLT00000000887
Oryzias
sp. (Medaka) : ENSORLT00000019345
Tetraodon
sp. (Tetraodon) : GSTENT00024720001
Tetraodon
sp. (Tetraodon) : GSTENT00028496001
Takifugu
sp. (Fugu) : SINFRUT00000163537
Takifugu
sp. (Fugu) : SINFRUT00000169991
NM_001012552
genome : 2,575,646 - 2,599,508 (23,863)
query : 54 - 2,411 (2,358/2,428)
10 exons
identity = 0.997
3'(1.000)5'
coverage = 0.977
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
ENSGALT00000035065
genome : 2,575,646 - 2,599,516 (23,871)
query : 1 - 2,360 (2,360/2,360)
10 exons
identity = 0.997
3'(1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
CR390167
genome : 2,575,659 - 2,579,159 (3,501)
query : 3 - 764 (762/764)
4 exons
identity = 0.999
3'(0.996)5'
coverage = 0.997
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
Contig306.11
2561029-2561198 W +
2766
2561199-2563964 N
Contig306.12
2563965-2565628 W +
680
2565629-2566308 N
Contig306.13
2566309-2570738 W +
100
2570739-2570838 N
Contig161.56
2570839-2575124 W -
100
2575125-2575224 N
Contig161.55
2575225-2577028 W -
C-rich
(CTGTG)n
(TTAGGG)n
(CCA)n
(A)n