bases per tick :
2000
1000
500
200
100
50
20
10
5
2
kb first site :
homology :
G.gallus
sequence viewer :
( start, end )
( middle, total length )
= (
,
)
XM_426858
Representative transcript
genome : 14,322,613 - 14,325,108 (2,496)
query : 1 - 1,731 (1,731/1,731)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
Ortholog candidate
H.sapiens
(Human) : HIT000433623
Pongo
sp. (Orangutan) : ENSPPYT00000008157
Macaca
sp. (Macaque) : XM_001100200
Mus
sp. (Mouse) : BC048715
Rattus
sp. (Rat) : XM_001060771
Canis
sp. (Dog) : XM_547215
Equus
sp. (Horse) : ENSECAT00000008094
Bos
sp. (Cow) : XM_592519
Monodelphis
sp. (Opossum) : ENSMODT00000021214
Danio
sp. (Zebrafish) : XM_688302
Oryzias
sp. (Medaka) : ENSORLT00000016365
Tetraodon
sp. (Tetraodon) : GSTENT00023744001
Takifugu
sp. (Fugu) : SINFRUT00000134907
ENSGALT00000000059
genome : 14,323,618 - 14,325,108 (1,491)
query : 1 - 1,491 (1,491/1,491)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
CR406674
Representative transcript
genome : 14,326,358 - 14,327,142 (785)
query : 1 - 761 (761/761)
1 exon
identity = 0.954
5'(0.954)3'
coverage = 1.000
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
CR385394
genome : 14,328,522 - 14,332,275 (3,754)
query : 11 - 736 (726/736)
4 exons
identity = 0.977
5'(1.000;1.000;0.969;0.957)3'
coverage = 0.986
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
ENSGALT00000000053
genome : 14,328,572 - 14,332,276 (3,705)
query : 1 - 992 (992/992)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
BX933195
Representative transcript
genome : 14,328,644 - 14,332,272 (3,629)
query : 12 - 919 (908/922)
5 exons
identity = 0.974
5'(0.981;1.000;0.969;0.990;0.966)3'
coverage = 0.985
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
Ortholog candidate
H.sapiens
(Human) : HIT000086112
Pan
sp. (Chimpanzee) : XM_001155112
Pongo
sp. (Orangutan) : ENSPPYT00000008159
Macaca
sp. (Macaque) : XM_001086038
Mus
sp. (Mouse) : AK020614
Rattus
sp. (Rat) : XM_001060664
Canis
sp. (Dog) : XM_849105
Equus
sp. (Horse) : XM_001497075
Bos
sp. (Cow) : BC122777
Monodelphis
sp. (Opossum) : XM_001365385
Danio
sp. (Zebrafish) : BC152082
Tetraodon
sp. (Tetraodon) : GSTENT00006274001
Takifugu
sp. (Fugu) : SINFRUT00000176260
XM_422971
genome : 14,328,651 - 14,332,275 (3,625)
query : 1 - 912 (912/912)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
XM_414701
genome : 14,332,786 - 14,354,647 (21,862)
query : 1 - 6,838 (6,838/6,838)
30 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
ENSGALT00000003054
Representative transcript
genome : 14,334,301 - 14,353,880 (19,580)
query : 1 - 5,518 (5,518/5,518)
32 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
Ortholog candidate
H.sapiens
(Human) : HIT000324975
Pan
sp. (Chimpanzee) : XM_001162571
Pongo
sp. (Orangutan) : ENSPPYT00000008247
Macaca
sp. (Macaque) : ENSMMUT00000027029
Mus
sp. (Mouse) : AK154698
Rattus
sp. (Rat) : BC088202
Canis
sp. (Dog) : XM_537004
Equus
sp. (Horse) : ENSECAT00000014603
Bos
sp. (Cow) : ENSBTAT00000037494
Monodelphis
sp. (Opossum) : XM_001370820
Monodelphis
sp. (Opossum) : XM_001367645
Danio
sp. (Zebrafish) : XR_044972
Oryzias
sp. (Medaka) : ENSORLT00000010227
Tetraodon
sp. (Tetraodon) : GSTENT00018525001
Takifugu
sp. (Fugu) : SINFRUT00000147412
H.sapiens
(Human) : HIT000391820
Pan
sp. (Chimpanzee) : XM_523266
Mus
sp. (Mouse) : AB112584
Rattus
sp. (Rat) : AB196699
Canis
sp. (Dog) : ENSCAFT00000030792
Equus
sp. (Horse) : XM_001498186
Bos
sp. (Cow) : BC122716
Contig78.249
14322458-14329047 W +
784
14329048-14329831 N
Contig78.250
14329832-14330913 W +
10
14330914-14330923 N
Contig78.251
14330924-14338457 W +
(TCC)n
(TTGGGG)n
GC_rich
GC_rich
(TGGA)n
(CTGGGG)n
CR1-E
A-rich
GC_rich
(CCCCG)n
A-rich
(CAA)n