bases per tick :
2000
1000
500
200
100
50
20
10
5
2
kb first site :
homology :
G.gallus
sequence viewer :
( start, end )
( middle, total length )
= (
,
)
XM_426761
Representative transcript
genome : 13,897,056 - 13,898,526 (1,471)
query : 1 - 837 (837/837)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
Ortholog candidate
H.sapiens
(Human) : HIT000325973
Pan
sp. (Chimpanzee) : XM_510716
Pongo
sp. (Orangutan) : ENSPPYT00000008163
Macaca
sp. (Macaque) : ENSMMUT00000002807
Mus
sp. (Mouse) : AK129465
Rattus
sp. (Rat) : Y17258
Canis
sp. (Dog) : XM_547213
Equus
sp. (Horse) : XM_001495983
Bos
sp. (Cow) : ENSBTAT00000022975
Monodelphis
sp. (Opossum) : XM_001365582
Oryzias
sp. (Medaka) : ENSORLT00000009584
Tetraodon
sp. (Tetraodon) : GSTENT00024067001
Takifugu
sp. (Fugu) : SINFRUT00000167730
ENSGALT00000001529
Representative transcript
genome : 13,902,163 - 13,905,316 (3,154)
query : 1 - 1,148 (1,148/1,148)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
Ortholog candidate
H.sapiens
(Human) : HIT000079607
Pan
sp. (Chimpanzee) : XM_001156579
Pongo
sp. (Orangutan) : ENSPPYT00000008164
Macaca
sp. (Macaque) : XM_001086388
Macaca
sp. (Macaque) : XM_001084320
Mus
sp. (Mouse) : BC027427
Rattus
sp. (Rat) : BC099240
Canis
sp. (Dog) : XM_537018
Equus
sp. (Horse) : XM_001497142
Bos
sp. (Cow) : BC109588
Monodelphis
sp. (Opossum) : XM_001365645
Danio
sp. (Zebrafish) : BC051775
Oryzias
sp. (Medaka) : ENSORLT00000009239
Tetraodon
sp. (Tetraodon) : CR691698
Takifugu
sp. (Fugu) : SINFRUT00000176347
XM_424526
Representative transcript
genome : 13,906,226 - 13,908,315 (2,090)
query : 1 - 709 (709/709)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
ENSGALT00000001494
genome : 13,906,230 - 13,906,673 (444)
query : 1 - 324 (324/324)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
AJ719275
Representative transcript
genome : 13,908,478 - 13,914,236 (5,759)
query : 1 - 2,687 (2,687/2,702)
11 exons
identity = 0.995
3'(1.000;1.000;0.991;1.000;0.992;1.000;0.997)5'
coverage = 1.000
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
Ortholog candidate
H.sapiens
(Human) : HIT000033597
Pan
sp. (Chimpanzee) : ENSPTRT00000013926
Pongo
sp. (Orangutan) : ENSPPYT00000008166
Macaca
sp. (Macaque) : ENSMMUT00000002812
Mus
sp. (Mouse) : AK078694
Rattus
sp. (Rat) : BC098800
Canis
sp. (Dog) : XM_537017
Equus
sp. (Horse) : XM_001496068
Bos
sp. (Cow) : BC114046
Monodelphis
sp. (Opossum) : ENSMODT00000036014
Danio
sp. (Zebrafish) : BC045501
Oryzias
sp. (Medaka) : ENSORLT00000009610
Tetraodon
sp. (Tetraodon) : GSTENT00024069001
Takifugu
sp. (Fugu) : SINFRUT00000146163
NM_001030628
genome : 13,908,478 - 13,914,236 (5,759)
query : 1 - 2,687 (2,687/2,702)
11 exons
identity = 0.995
3'(1.000;1.000;0.991;1.000;0.992;1.000;0.997)5'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
ENSGALT00000003862
genome : 13,908,481 - 13,914,236 (5,756)
query : 1 - 2,689 (2,689/2,689)
11 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
1164
13895739-13895956 N
Contig78.206
13895957-13898608 W +
1213
13898609-13899821 N
Contig78.207
13899822-13900344 W +
1133
13900345-13901477 N
Contig78.208
13901478-13903487 W +
471
13903488-13903958 N
Contig78.209
13903959-13907041 W +
1003
13907042-13908044 N
Contig78.210
13908045-13911738 W +
(CCCCAA)n
(CCCCAA)n
(GGA)n
(GGGTG)n