bases per tick :
2000
1000
500
200
100
50
20
10
5
2
kb first site :
homology :
G.gallus
sequence viewer :
( start, end )
( middle, total length )
= (
,
)
ENSGALT00000004228
genome : 13,755,561 - 13,772,351 (16,791)
query : 1 - 1,004 (1,004/1,004)
9 exons
identity = 0.998
5'(0.962;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
XM_414724
genome : 13,762,515 - 13,817,194 (54,680)
query : 1 - 3,255 (3,255/3,255)
23 exons
identity = 0.998
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
CR391686
genome : 13,772,272 - 13,773,324 (1,053)
query : 4 - 1,056 (1,053/1,059)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 0.994
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
CR354058
Representative transcript
genome : 13,772,347 - 13,773,325 (979)
query : 1 - 912 (912/914)
2 exons
identity = 0.991
5'(1.000;0.974)3'
coverage = 0.998
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
Ortholog candidate
H.sapiens
(Human) : HIT000032054
Pan
sp. (Chimpanzee) : ENSPTRT00000013898
Pongo
sp. (Orangutan) : ENSPPYT00000008149
Macaca
sp. (Macaque) : ENSMMUT00000039734
Mus
sp. (Mouse) : AK012805
Rattus
sp. (Rat) : BC081997
Canis
sp. (Dog) : XM_849189
Equus
sp. (Horse) : ENSECAT00000021444
Bos
sp. (Cow) : BC110269
Monodelphis
sp. (Opossum) : XM_001372580
Danio
sp. (Zebrafish) : BC049030
Tetraodon
sp. (Tetraodon) : CR724064
Takifugu
sp. (Fugu) : SINFRUT00000158595
H.sapiens
(Human) : HIT000035573
Pan
sp. (Chimpanzee) : ENSPTRT00000013899
Pongo
sp. (Orangutan) : CR858530
Macaca
sp. (Macaque) : XM_001084650
Mus
sp. (Mouse) : AF155575
Equus
sp. (Horse) : ENSECAT00000013050
Bos
sp. (Cow) : BC103065
Monodelphis
sp. (Opossum) : XM_001372642
Danio
sp. (Zebrafish) : BC068332
Oryzias
sp. (Medaka) : ENSORLT00000009414
Tetraodon
sp. (Tetraodon) : CR638586
Takifugu
sp. (Fugu) : SINFRUT00000148738
H.sapiens
(Human) : HIT000053639
Pan
sp. (Chimpanzee) : XM_001171742
Pongo
sp. (Orangutan) : ENSPPYT00000008152
Macaca
sp. (Macaque) : XM_001118464
Mus
sp. (Mouse) : AB093257
Canis
sp. (Dog) : ENSCAFT00000031276
Equus
sp. (Horse) : XM_001496915
Bos
sp. (Cow) : XM_001256127
Monodelphis
sp. (Opossum) : XM_001372719
Danio
sp. (Zebrafish) : NM_001030270
Oryzias
sp. (Medaka) : ENSORLT00000009383
Tetraodon
sp. (Tetraodon) : GSTENT00024052001
Takifugu
sp. (Fugu) : SINFRUT00000148742
H.sapiens
(Human) : HIT000274267
CR407000
genome : 13,772,449 - 13,773,327 (879)
query : 1 - 847 (847/847)
1 exon
identity = 0.959
5'(0.959)3'
coverage = 1.000
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
CR386015
genome : 13,772,529 - 13,773,325 (797)
query : 4 - 796 (793/796)
1 exon
identity = 0.987
5'(0.987)3'
coverage = 0.996
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
ENSGALT00000004199
genome : 13,774,750 - 13,782,198 (7,449)
query : 1 - 482 (482/482)
2 exons
identity = 1.000
5'(1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
Contig78.182
13764836-13768088 W +
10
13768089-13768098 N
Contig78.183
13768099-13768923 W +
10
13768924-13768933 N
Contig78.184
13768934-13774362 W +
127
13774363-13774489 N
Contig78.185
13774490-13779411 W +
565
13779412-13779976 N
Contig78.186
13779977-13780835 W +
GC_rich
(TCCGG)n
CR1-D
CR1-C
CR1-C
GC_rich
GC_rich
(CATCG)n
GC_rich
GC_rich
GC_rich
G-rich
GC_rich
GC_rich
(TCC)n
(GGA)n
(TGGA)n