bases per tick :
2000
1000
500
200
100
50
20
10
5
2
kb first site :
homology :
G.gallus
sequence viewer :
( start, end )
( middle, total length )
= (
,
)
ENSGALT00000022311
genome : 53,695,197 - 53,758,648 (63,452)
query : 1 - 4,116 (4,116/4,116)
28 exons
identity = 0.996
5'(1.000;1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
XR_026965
genome : 53,695,206 - 53,759,581 (64,376)
query : 1 - 5,046 (5,046/5,046)
27 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
XM_419696
Representative transcript
genome : 53,762,737 - 53,785,562 (22,826)
query : 1 - 4,292 (4,292/4,292)
17 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
Ortholog candidate
H.sapiens
(Human) : HIT000011095
Pan
sp. (Chimpanzee) : XM_518827
Pongo
sp. (Orangutan) : CR858532
Macaca
sp. (Macaque) : AB070116
Mus
sp. (Mouse) : AK155571
Rattus
sp. (Rat) : XM_574308
Canis
sp. (Dog) : ENSCAFT00000000999
Equus
sp. (Horse) : ENSECAT00000013902
Bos
sp. (Cow) : BC109896
Monodelphis
sp. (Opossum) : XM_001371108
Danio
sp. (Zebrafish) : BC054925
Oryzias
sp. (Medaka) : ENSORLT00000018500
Tetraodon
sp. (Tetraodon) : GSTENT00023074001
Takifugu
sp. (Fugu) : SINFRUT00000146965
ENSGALT00000022317
genome : 53,764,850 - 53,784,117 (19,268)
query : 1 - 2,131 (2,131/2,131)
16 exons
identity = 0.998
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;0.958;1.000;
1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
AJ720114
Representative transcript
genome : 53,785,644 - 53,790,123 (4,480)
query : 2 - 1,175 (1,174/1,209)
3 exons
identity = 0.997
5'(1.000;0.991;0.998)3'
coverage = 0.999
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
Ortholog candidate
H.sapiens
(Human) : HIT000011720
Pan
sp. (Chimpanzee) : XM_001145020
Pongo
sp. (Orangutan) : ENSPPYT00000019941
Macaca
sp. (Macaque) : XM_001092693
Mus
sp. (Mouse) : AK013225
Rattus
sp. (Rat) : BC058501
Canis
sp. (Dog) : XM_849919
Bos
sp. (Cow) : BC111195
Monodelphis
sp. (Opossum) : XM_001371159
Danio
sp. (Zebrafish) : BC122292
Tetraodon
sp. (Tetraodon) : CR709604
Takifugu
sp. (Fugu) : SINFRUT00000180493
NM_001097535
genome : 53,785,644 - 53,790,123 (4,480)
query : 2 - 1,175 (1,174/1,209)
3 exons
identity = 0.997
5'(1.000;0.991;0.998)3'
coverage = 0.999
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
ENSGALT00000022319
genome : 53,785,644 - 53,790,122 (4,479)
query : 1 - 1,175 (1,175/1,175)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
CR733091
Representative transcript
genome : 53,790,958 - 53,791,750 (793)
query : 1 - 793 (793/793)
1 exon
identity = 0.992
5'(0.992)3'
coverage = 1.000
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
CR523723
Representative transcript
genome : 53,792,244 - 53,793,817 (1,574)
query : 11 - 1,585 (1,575/1,585)
1 exon
identity = 0.984
5'(0.984)3'
coverage = 0.994
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
Contig26.126
53754149-53794148 W +