bases per tick :
2000
1000
500
200
100
50
20
10
5
2
kb first site :
homology :
G.gallus
sequence viewer :
( start, end )
( middle, total length )
= (
,
)
AJ719289
Representative transcript
genome : 8,533,448 - 8,597,209 (63,762)
query : 1 - 4,487 (4,487/4,502)
23 exons
identity = 0.994
5'(0.995;1.000;0.992;0.994)3'
coverage = 1.000
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
Ortholog candidate
H.sapiens
(Human) : HIT000489762
Pan
sp. (Chimpanzee) : XM_528010
Pongo
sp. (Orangutan) : ENSPPYT00000021241
Macaca
sp. (Macaque) : XR_014323
Mus
sp. (Mouse) : AK046056
Rattus
sp. (Rat) : XM_001055148
Canis
sp. (Dog) : XM_539937
Equus
sp. (Horse) : XM_001915061
Bos
sp. (Cow) : XM_585301
Monodelphis
sp. (Opossum) : XM_001364910
Danio
sp. (Zebrafish) : BC055184
Oryzias
sp. (Medaka) : ENSORLT00000013265
Tetraodon
sp. (Tetraodon) : GSTENT00023999001
Takifugu
sp. (Fugu) : SINFRUT00000137557
NM_001030967
genome : 8,533,448 - 8,597,209 (63,762)
query : 1 - 4,487 (4,487/4,502)
23 exons
identity = 0.994
5'(0.995;1.000;0.992;0.994)3'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
ENSGALT00000010436
genome : 8,533,448 - 8,597,205 (63,758)
query : 1 - 4,488 (4,488/4,488)
23 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
ENSGALT00000038686
genome : 8,533,504 - 8,596,633 (63,130)
query : 1 - 3,854 (3,854/3,854)
23 exons
identity = 0.997
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
BX931003
genome : 8,571,385 - 8,597,210 (25,826)
query : 1 - 2,128 (2,128/2,128)
8 exons
identity = 0.994
5'(0.995;1.000;0.992;0.994)3'
coverage = 1.000
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
AJ851505
Representative transcript
genome : 8,603,660 - 8,653,381 (49,722)
query : 2 - 2,626 (2,625/2,641)
10 exons
identity = 0.996
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.994)3'
coverage = 0.999
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
Ortholog candidate
H.sapiens
(Human) : HIT000030899
Pan
sp. (Chimpanzee) : ENSPTRT00000036915
Pongo
sp. (Orangutan) : CR859782
Macaca
sp. (Macaque) : AB168676
Mus
sp. (Mouse) : AK032039
Rattus
sp. (Rat) : BC078908
Canis
sp. (Dog) : XM_856569
Equus
sp. (Horse) : ENSECAT00000009374
Bos
sp. (Cow) : BC122622
Monodelphis
sp. (Opossum) : XM_001364982
Danio
sp. (Zebrafish) : BC075905
Oryzias
sp. (Medaka) : ENSORLT00000013308
Tetraodon
sp. (Tetraodon) : GSTENT00033643001
Takifugu
sp. (Fugu) : SINFRUT00000144885
NM_001012556
genome : 8,603,660 - 8,653,381 (49,722)
query : 2 - 2,626 (2,625/2,641)
10 exons
identity = 0.996
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.994)3'
coverage = 0.999
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
ENSGALT00000010467
genome : 8,603,660 - 8,653,379 (49,720)
query : 1 - 2,620 (2,620/2,620)
10 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
CR387359
Representative transcript
genome : 8,626,648 - 8,627,693 (1,046)
query : 4 - 1,031 (1,028/1,031)
1 exon
identity = 0.973
5'(0.973)3'
coverage = 0.997
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
CR387863
genome : 8,644,130 - 8,672,209 (28,080)
query : 1 - 920 (920/924)
5 exons
identity = 0.997
5'(1.000;1.000;1.000)3'
coverage = 0.996
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
CR387527
Representative transcript
genome : 8,644,512 - 8,645,518 (1,007)
query : 1 - 1,007 (1,007/1,007)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
Contig0.359
8588520-8639419 W +
1248
8639420-8640667 N
Contig0.360
8640668-8661119 W +
624
8661120-8661743 N
Contig0.361
8661744-8668519 W +