bases per tick :
2000
1000
500
200
100
50
20
10
5
2
kb first site :
homology :
E.caballus
sequence viewer :
( start, end )
( middle, total length )
= (
,
)
ENSECAT00000025051
genome : 57,392,273 - 57,440,369 (48,097)
query : 1 - 2,499 (2,499/2,499)
16 exons
identity = 0.998
5'(1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
XM_001490944
genome : 57,392,273 - 57,440,369 (48,097)
query : 1 - 2,223 (2,223/2,223)
14 exons
identity = 1.000
5'(1.000)3'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
XM_001489760
Representative transcript
genome : 57,448,446 - 57,472,141 (23,696)
query : 1 - 2,704 (2,704/2,704)
13 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
Ortholog candidate
H.sapiens
(Human) : HIT000649057
Pan
sp. (Chimpanzee) : XM_517603
Pongo
sp. (Orangutan) : CR859834
Macaca
sp. (Macaque) : AB179175
Mus
sp. (Mouse) : AK141537
Rattus
sp. (Rat) : BC097993
Canis
sp. (Dog) : XM_843546
Bos
sp. (Cow) : BT026297
Monodelphis
sp. (Opossum) : XM_001368773
Gallus
sp. (Chicken) : AJ720579
Danio
sp. (Zebrafish) : BC045435
Tetraodon
sp. (Tetraodon) : GSTENT00033642001
Takifugu
sp. (Fugu) : SINFRUT00000154961
ENSECAT00000010756
genome : 57,448,446 - 57,469,913 (21,468)
query : 1 - 2,584 (2,584/2,584)
12 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
XM_001490918
Representative transcript
genome : 57,478,573 - 57,549,950 (71,378)
query : 1 - 2,352 (2,352/2,352)
11 exons
identity = 1.000
3'(1.000)5'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
ENSECAT00000018968
genome : 57,478,573 - 57,549,677 (71,105)
query : 1 - 2,148 (2,148/2,148)
10 exons
identity = 1.000
3'(1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
contig_16928
57440293-57441361 W +
1338
57441362-57442699 N
contig_16929
57442700-57471655 W +
232
57471656-57471887 N
contig_16930
57471888-57480292 W +