bases per tick :
2000
1000
500
200
100
50
20
10
5
2
kb first site :
homology :
D.rerio
sequence viewer :
( start, end )
( middle, total length )
= (
,
)
XM_690640
genome : 33,793,482 - 33,869,283 (75,802)
query : 1 - 4,818 (4,818/4,818)
29 exons
identity = 0.998
3'()5'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
ENSDART00000046546
genome : 33,793,928 - 33,868,441 (74,514)
query : 1 - 4,290 (4,290/4,290)
28 exons
identity = 0.997
3'()5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
XM_692748
genome : 33,816,947 - 33,840,561 (23,615)
query : 1 - 1,160 (1,160/1,160)
3 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
BC122129
Representative transcript
genome : 33,816,955 - 33,821,974 (5,020)
query : 1 - 1,064 (1,064/1,080)
2 exons
identity = 0.992
5'(0.988;1.000)3'
coverage = 1.000
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
Ortholog candidate
H.sapiens
(Human) : HIT000032095
Pan
sp. (Chimpanzee) : ENSPTRT00000060424
Pongo
sp. (Orangutan) : ENSPPYT00000008203
Macaca
sp. (Macaque) : XM_001089402
Mus
sp. (Mouse) : AK146008
Rattus
sp. (Rat) : BC087601
Canis
sp. (Dog) : ENSCAFT00000031073
Equus
sp. (Horse) : ENSECAT00000016331
Bos
sp. (Cow) : BC122684
Monodelphis
sp. (Opossum) : ENSMODT00000020555
Gallus
sp. (Chicken) : XM_415054
Oryzias
sp. (Medaka) : ENSORLT00000009311
Tetraodon
sp. (Tetraodon) : GSTENT00024048001
Takifugu
sp. (Fugu) : SINFRUT00000163186
ENSDART00000105658
genome : 33,817,459 - 33,840,558 (23,100)
query : 1 - 645 (645/645)
3 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
ENSDART00000066585
genome : 33,821,655 - 33,823,503 (1,849)
query : 1 - 333 (333/333)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
Zv7_scaffold2352
33811464-33827463 W +
AT_rich
DNA8-8_DR
Dr000226
Dr000193
Dr000791
Dr000582
Dr000792
DNA8-8_DR
Dr000351
HATN14_DR
Dr000183
Dr000913
Dr000943
AT_rich
Dr000914
Dr000183
Dr000320
Dr000341
TDR18
(TA)n
AT_rich
TDR18
Dr000134
TDR18
DNA8-5_DR
Dr001078
HATN12_DR
Dr000134
HATN12_DR
ANGEL
ANGEL
ANGEL
HATN14_DR
(CA)n
(TC)n
Dr000053
AT_rich
Dr000053
Dr000183
CR1-1_DR
Dr000193
Dr000332
Dr000872
HATN1_DR
(TA)n
HATN1_DR
AT_rich
Dr000941
Dr000941
Dr000873
Dr000040
Dr000002