bases per tick :
2000
1000
500
200
100
50
20
10
5
2
kb first site :
homology :
D.rerio
sequence viewer :
( start, end )
( middle, total length )
= (
,
)
BC081528
Representative transcript
genome : 18,961,243 - 18,963,908 (2,666)
query : 1 - 497 (497/513)
4 exons
identity = 0.988
3'(0.987;0.984;0.981;0.994)5'
coverage = 1.000
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
Ortholog candidate
H.sapiens
(Human) : HIT000005777
Pan
sp. (Chimpanzee) : DQ885657
Pongo
sp. (Orangutan) : DQ885659
Mus
sp. (Mouse) : BC086933
Rattus
sp. (Rat) : XM_001053017
Canis
sp. (Dog) : XM_535802
Equus
sp. (Horse) : XM_001501794
Monodelphis
sp. (Opossum) : XM_001369796
Gallus
sp. (Chicken) : BX929367
Tetraodon
sp. (Tetraodon) : CR705214
NM_001004651
genome : 18,961,243 - 18,963,908 (2,666)
query : 1 - 497 (497/513)
4 exons
identity = 0.988
3'(0.987;0.984;0.981;0.994)5'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
ENSDART00000079104
genome : 18,961,234 - 18,963,908 (2,675)
query : 1 - 506 (506/506)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
BC142854
genome : 18,964,154 - 18,968,683 (4,530)
query : 1 - 619 (619/644)
2 exons
identity = 0.982
5'(0.992;0.980)3'
coverage = 0.990
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
NM_001099257
genome : 18,964,154 - 18,968,683 (4,530)
query : 1 - 619 (619/644)
2 exons
identity = 0.982
5'(0.992;0.980)3'
coverage = 0.990
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
BC122337
genome : 18,964,154 - 18,968,680 (4,527)
query : 1 - 612 (612/631)
2 exons
identity = 0.982
5'(0.992;0.980)3'
coverage = 1.000
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
ENSDART00000103862
genome : 18,964,154 - 18,968,685 (4,532)
query : 1 - 617 (617/617)
2 exons
identity = 0.998
5'(0.992;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
BC129237
Representative transcript
genome : 18,964,187 - 18,970,248 (6,062)
query : 1 - 2,161 (2,161/2,189)
2 exons
identity = 0.980
5'(0.976;0.980)3'
coverage = 1.000
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
Ortholog candidate
H.sapiens
(Human) : HIT000337802
Pan
sp. (Chimpanzee) : XM_001175244
Mus
sp. (Mouse) : BC009166
Canis
sp. (Dog) : ENSCAFT00000016580
Equus
sp. (Horse) : XM_001501802
Monodelphis
sp. (Opossum) : ENSMODT00000038568
Gallus
sp. (Chicken) : BX930247
Tetraodon
sp. (Tetraodon) : CR644909
BC129167
Representative transcript
genome : 18,971,475 - 19,014,190 (42,716)
query : 1 - 2,048 (2,048/2,063)
14 exons
identity = 0.989
5'(0.974;1.000;0.995;0.991;1.000;1.000;1.000;
1.000;1.000;0.984;0.987;0.978;1.000;0.984)3'
coverage = 1.000
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
Ortholog candidate
H.sapiens
(Human) : HIT000330049
Pan
sp. (Chimpanzee) : ENSPTRT00000031031
Pongo
sp. (Orangutan) : ENSPPYT00000017808
Macaca
sp. (Macaque) : XM_001097638
Mus
sp. (Mouse) : AK155286
Rattus
sp. (Rat) : AB244983
Canis
sp. (Dog) : XM_545189
Equus
sp. (Horse) : ENSECAT00000023293
Bos
sp. (Cow) : XM_001255509
Monodelphis
sp. (Opossum) : XM_001369539
Gallus
sp. (Chicken) : CR389162
Oryzias
sp. (Medaka) : ENSORLT00000006459
Tetraodon
sp. (Tetraodon) : GSTENT00013868001
Takifugu
sp. (Fugu) : SINFRUT00000146773
Takifugu
sp. (Fugu) : SINFRUT00000149621
NM_001044341
genome : 18,971,475 - 19,014,190 (42,716)
query : 1 - 2,048 (2,048/2,063)
14 exons
identity = 0.989
5'(0.974;1.000;0.995;0.991;1.000;1.000;1.000;
1.000;1.000;0.984;0.987;0.978;1.000;0.984)3'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
ENSDART00000103855
genome : 18,971,475 - 19,014,202 (42,728)
query : 1 - 2,062 (2,062/2,062)
14 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
ENSDART00000009431
genome : 18,989,198 - 19,012,213 (23,016)
query : 1 - 1,335 (1,335/1,335)
13 exons
identity = 0.995
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;0.892)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
Zv7_scaffold1886
18952832-19032831 W +