bases per tick :
2000
1000
500
200
100
50
20
10
5
2
kb first site :
homology :
D.rerio
sequence viewer :
( start, end )
( middle, total length )
= (
,
)
AF506232
Representative transcript
genome : 46,177,375 - 46,198,949 (21,575)
query : 1 - 1,416 (1,416/1,416)
13 exons
identity = 0.989
5'(0.981;1.000;0.987;1.000;0.970;1.000;0.983;
1.000;0.982;0.985;1.000;0.983;0.996)3'
coverage = 1.000
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
Ortholog candidate
H.sapiens
(Human) : HIT000051061
Pongo
sp. (Orangutan) : CR860095
Macaca
sp. (Macaque) : AB169639
Mus
sp. (Mouse) : AK076362
Rattus
sp. (Rat) : XM_226031
Canis
sp. (Dog) : XM_544308
Equus
sp. (Horse) : XM_001918023
Bos
sp. (Cow) : BC105412
Monodelphis
sp. (Opossum) : XM_001369092
Gallus
sp. (Chicken) : BX930950
Oryzias
sp. (Medaka) : ENSORLT00000001887
Tetraodon
sp. (Tetraodon) : CR662536
Takifugu
sp. (Fugu) : SINFRUT00000159806
H.sapiens
(Human) : HIT000052806
Pan
sp. (Chimpanzee) : XR_020264
Pongo
sp. (Orangutan) : ENSPPYT00000023973
Macaca
sp. (Macaque) : XM_001092487
Mus
sp. (Mouse) : AK017109
Rattus
sp. (Rat) : ENSRNOT00000045556
Rattus
sp. (Rat) : XM_001060927
Canis
sp. (Dog) : XM_538106
Equus
sp. (Horse) : XM_001493143
Bos
sp. (Cow) : ENSBTAT00000046800
Monodelphis
sp. (Opossum) : ENSMODT00000014914
NM_173260
genome : 46,177,375 - 46,198,949 (21,575)
query : 1 - 1,416 (1,416/1,416)
13 exons
identity = 0.989
5'(0.981;1.000;0.987;1.000;0.970;1.000;0.983;
1.000;0.982;0.985;1.000;0.983;0.996)3'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
BC071324
genome : 46,177,410 - 46,198,966 (21,557)
query : 1 - 1,397 (1,397/1,428)
13 exons
identity = 0.989
5'(0.986;1.000;0.987;1.000;0.970;0.992;0.983;
1.000;0.982;0.985;1.000;0.983;0.993)3'
coverage = 0.999
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
BC154771
genome : 46,177,410 - 46,198,968 (21,559)
query : 1 - 1,569 (1,569/1,598)
13 exons
identity = 0.987
5'(0.971;1.000;0.987;1.000;0.970;1.000;0.983;
1.000;0.982;0.985;1.000;0.983;0.996)3'
coverage = 1.000
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
ENSDART00000074498
genome : 46,178,126 - 46,198,974 (20,849)
query : 17 - 1,319 (1,303/1,319)
11 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 0.988
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
ENSDART00000012738
genome : 46,178,127 - 46,198,744 (20,618)
query : 18 - 1,089 (1,072/1,089)
11 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 0.984
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
XM_680802
Representative transcript
genome : 46,199,480 - 46,228,396 (28,917)
query : 1 - 2,025 (2,025/2,025)
9 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
Zv7_scaffold1399
46168162-46208161 W +