bases per tick :
2000
1000
500
200
100
50
20
10
5
2
kb first site :
homology :
D.rerio
sequence viewer :
( start, end )
( middle, total length )
= (
,
)
XM_001337807
Representative transcript
genome : 20,228,855 - 20,238,625 (9,771)
query : 1 - 1,377 (1,377/1,377)
11 exons
identity = 1.000
5'(1.000)3'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
BC121197
Representative transcript
genome : 20,249,853 - 20,266,303 (16,451)
query : 1 - 2,846 (2,846/2,890)
12 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
Ortholog candidate
H.sapiens
(Human) : HIT000040787
Pan
sp. (Chimpanzee) : XM_526685
Pongo
sp. (Orangutan) : CR858886
Macaca
sp. (Macaque) : ENSMMUT00000032020
Mus
sp. (Mouse) : AK035291
Rattus
sp. (Rat) : AY325200
Canis
sp. (Dog) : ENSCAFT00000006212
Equus
sp. (Horse) : XM_001501730
Bos
sp. (Cow) : BC153294
Monodelphis
sp. (Opossum) : ENSMODT00000015650
Tetraodon
sp. (Tetraodon) : GSTENT00005919001
Takifugu
sp. (Fugu) : SINFRUT00000180856
NM_001045048
genome : 20,249,853 - 20,266,303 (16,451)
query : 1 - 2,846 (2,846/2,890)
12 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
ENSDART00000050074
genome : 20,249,853 - 20,265,147 (15,295)
query : 1 - 1,696 (1,696/1,696)
12 exons
identity = 0.996
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;0.972)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
BC154611
Representative transcript
genome : 20,266,412 - 20,291,367 (24,956)
query : 1 - 1,884 (1,884/1,918)
13 exons
identity = 0.990
3'(0.987;0.992;1.000;0.987;1.000;1.000;1.000)5'
coverage = 0.999
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
Ortholog candidate
H.sapiens
(Human) : HIT000255785
Pan
sp. (Chimpanzee) : XM_517131
Pongo
sp. (Orangutan) : ENSPPYT00000017030
Macaca
sp. (Macaque) : XM_001082520
Mus
sp. (Mouse) : AK019621
Rattus
sp. (Rat) : XM_341224
Canis
sp. (Dog) : ENSCAFT00000026070
Equus
sp. (Horse) : ENSECAT00000007405
Bos
sp. (Cow) : XM_588725
Monodelphis
sp. (Opossum) : XM_001367283
Gallus
sp. (Chicken) : BX934299
Tetraodon
sp. (Tetraodon) : CR657029
Takifugu
sp. (Fugu) : SINFRUT00000174419
NM_001113599
genome : 20,266,412 - 20,291,367 (24,956)
query : 1 - 1,884 (1,884/1,918)
13 exons
identity = 0.990
3'(0.987;0.992;1.000;0.987;1.000;1.000;1.000)5'
coverage = 0.999
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
ENSDART00000018832
genome : 20,269,433 - 20,291,284 (21,852)
query : 1 - 1,356 (1,356/1,356)
12 exons
identity = 0.996
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
Zv7_scaffold1164
20238078-20278077 W +