bases per tick :
2000
1000
500
200
100
50
20
10
5
2
kb first site :
homology :
D.rerio
sequence viewer :
( start, end )
( middle, total length )
= (
,
)
BC107993
Representative transcript
genome : 1,981,825 - 1,989,544 (7,720)
query : 14 - 1,259 (1,246/1,275)
6 exons
identity = 0.981
5'(0.926;0.917;0.982;0.975;0.993;0.989)3'
coverage = 0.990
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
Ortholog candidate
H.sapiens
(Human) : HIT000263315
Pan
sp. (Chimpanzee) : XM_511185
Pongo
sp. (Orangutan) : ENSPPYT00000009089
Mus
sp. (Mouse) : BC011328
Rattus
sp. (Rat) : U67910
Equus
sp. (Horse) : AJ515902
Monodelphis
sp. (Opossum) : XM_001374015
Takifugu
sp. (Fugu) : SINFRUT00000144532
NM_001037403
genome : 1,981,825 - 1,989,544 (7,720)
query : 14 - 1,259 (1,246/1,275)
6 exons
identity = 0.981
5'(0.926;0.917;0.982;0.975;0.993;0.989)3'
coverage = 0.990
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
ENSDART00000106650
genome : 1,981,838 - 1,989,565 (7,728)
query : 1 - 1,254 (1,254/1,254)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
ENSDART00000082023
genome : 1,983,695 - 1,989,163 (5,469)
query : 1 - 753 (753/753)
5 exons
identity = 0.995
5'(1.000;0.958;0.995;1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
ENSDART00000106648
genome : 1,983,707 - 1,989,142 (5,436)
query : 1 - 729 (729/729)
5 exons
identity = 0.967
5'(1.000;0.724;1.000;1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
Zv7_scaffold1137
1977684-1993683 W +
AT_rich
ANGEL
TDR3
HATN4_DR
TDR3
Dr000281
HarbingerN1_DR
HE1_DR1
TDR2
AT_rich
TDR11
(CCCTAA)n
TDR11
Dr000089
CR1-1_DR
SINE_DR2
CR1-1_DR
TDR13
DNA25TWA1_DR
Dr000093
Dr000173
AT_rich
Dr000181
Dr000181
(TA)n
HE1_DR1
TC1DR3
Dr000215
DNA2-2_DR
Dr000108
Dr000596
Ngaro1_DR
Dr000297
HATN8_DR
Harbinger-N10_DR
Ngaro1_DR
Dr000596
HATN4_DR
HarbingerN7_DR
Dr000284
(CCAA)n
Dr000284
HarbingerN7_DR
HATN4_DR