bases per tick :
2000
1000
500
200
100
50
20
10
5
2
kb first site :
homology :
D.rerio
sequence viewer :
( start, end )
( middle, total length )
= (
,
)
XM_001923233
Representative transcript
genome : 4,518,831 - 4,528,316 (9,486)
query : 1 - 838 (838/838)
7 exons
identity = 0.996
5'(1.000;1.000;1.000;1.000;1.000;1.000;0.945)3'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
XM_001920827
Representative transcript
genome : 4,530,332 - 4,583,302 (52,971)
query : 1 - 5,469 (5,469/5,469)
38 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
Ortholog candidate
H.sapiens
(Human) : HIT000059719
Pan
sp. (Chimpanzee) : ENSPTRT00000018691
Pongo
sp. (Orangutan) : ENSPPYT00000010853
Macaca
sp. (Macaque) : ENSMMUT00000021458
Mus
sp. (Mouse) : AF287141
Rattus
sp. (Rat) : AB097814
Canis
sp. (Dog) : ENSCAFT00000031202
Bos
sp. (Cow) : ENSBTAT00000020083
Monodelphis
sp. (Opossum) : ENSMODT00000007062
Gallus
sp. (Chicken) : XM_001233947
Danio
sp. (Zebrafish) : XM_682212
Oryzias
sp. (Medaka) : ENSORLT00000010266
Tetraodon
sp. (Tetraodon) : GSTENT00012070001
Tetraodon
sp. (Tetraodon) : GSTENT00012848001
Takifugu
sp. (Fugu) : SINFRUT00000157760
BC122150
Representative transcript
genome : 4,594,813 - 4,603,611 (8,799)
query : 1 - 1,200 (1,200/1,216)
8 exons
identity = 0.995
5'(1.000;0.994)3'
coverage = 1.000
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
Ortholog candidate
H.sapiens
(Human) : HIT000293667
Pan
sp. (Chimpanzee) : XM_001172153
Pongo
sp. (Orangutan) : ENSPPYT00000010847
Macaca
sp. (Macaque) : XM_001092673
Mus
sp. (Mouse) : AK088107
Rattus
sp. (Rat) : XM_001077056
Canis
sp. (Dog) : XM_850107
Monodelphis
sp. (Opossum) : XM_001374788
Gallus
sp. (Chicken) : CR406026
Oryzias
sp. (Medaka) : ENSORLT00000010274
Tetraodon
sp. (Tetraodon) : GSTENT00001022001
ENSDART00000092270
genome : 4,594,813 - 4,603,611 (8,799)
query : 1 - 1,200 (1,200/1,200)
8 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
Zv7_scaffold1063
4516817-4596816 W +