bases per tick :
2000
1000
500
200
100
50
20
10
5
2
kb first site :
homology :
D.rerio
sequence viewer :
( start, end )
( middle, total length )
= (
,
)
BC083220
Representative transcript
genome : 13,245,663 - 13,256,945 (11,283)
query : 2 - 1,445 (1,444/1,475)
9 exons
identity = 0.994
3'(0.992;1.000;1.000;0.992;0.993;1.000;0.986;
0.990;0.994)5'
coverage = 0.994
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
Ortholog candidate
H.sapiens
(Human) : HIT000096616
Pan
sp. (Chimpanzee) : XM_520770
Pongo
sp. (Orangutan) : ENSPPYT00000005144
Macaca
sp. (Macaque) : XM_001092767
Mus
sp. (Mouse) : AK145820
Rattus
sp. (Rat) : XM_001071552
Canis
sp. (Dog) : XM_534879
Equus
sp. (Horse) : XM_001497503
Bos
sp. (Cow) : BC102242
Monodelphis
sp. (Opossum) : XM_001366901
Gallus
sp. (Chicken) : CR406790
Oryzias
sp. (Medaka) : ENSORLT00000015938
Tetraodon
sp. (Tetraodon) : GSTENT00013892001
Takifugu
sp. (Fugu) : SINFRUT00000151357
NM_001006097
genome : 13,245,663 - 13,256,945 (11,283)
query : 2 - 1,445 (1,444/1,475)
9 exons
identity = 0.994
3'(0.992;1.000;1.000;0.992;0.993;1.000;0.986;
0.990;0.994)5'
coverage = 0.994
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
ENSDART00000024312
genome : 13,245,652 - 13,256,945 (11,294)
query : 1 - 1,455 (1,455/1,455)
9 exons
identity = 0.995
3'(1.000;1.000;1.000;1.000;0.948;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
Zv7_scaffold349
13243304-13259303 W +
AT_rich
(TA)n
AT_rich
AT_rich
AT_rich
AT_rich
TDR18
TDR18
AT_rich
AT_rich
(TGAA)n
SINE_DR2
HATN5_DR
TDR3
(TG)n
AT_rich
AT_rich
AT_rich
HE1_DR1
HATN12_DR
HATN12_DR
HATN4_DR
HATN4_DR
DNA11TA1_DR
Dr000202
Dr000202
Dr000460
(CA)n
AT_rich
HATN2_DR
HATN2_DR
AT_rich
Dr000250
Dr000250
Dr000562
Dr000809
Dr000562