bases per tick :
2000
1000
500
200
100
50
20
10
5
2
kb first site :
homology :
D.rerio
sequence viewer :
( start, end )
( middle, total length )
= (
,
)
BC097131
Representative transcript
genome : 50,083,593 - 50,089,676 (6,084)
query : 1 - 1,346 (1,346/1,385)
7 exons
identity = 0.992
3'(0.987;0.995;0.989;0.992;1.000;0.996;1.000)5'
coverage = 1.000
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
Ortholog candidate
H.sapiens
(Human) : HIT000032727
Pan
sp. (Chimpanzee) : XM_514446
Pongo
sp. (Orangutan) : ENSPPYT00000000716
Macaca
sp. (Macaque) : XM_001118147
Mus
sp. (Mouse) : BC099453
Rattus
sp. (Rat) : AF217233
Canis
sp. (Dog) : ENSCAFT00000020714
Equus
sp. (Horse) : ENSECAT00000023350
Bos
sp. (Cow) : BC103262
Monodelphis
sp. (Opossum) : XM_001369450
Gallus
sp. (Chicken) : CR387446
Oryzias
sp. (Medaka) : ENSORLT00000017322
Takifugu
sp. (Fugu) : SINFRUT00000140226
NM_001025177
genome : 50,083,593 - 50,089,676 (6,084)
query : 1 - 1,346 (1,346/1,385)
7 exons
identity = 0.992
3'(0.987;0.995;0.989;0.992;1.000;0.996;1.000)5'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
ENSDART00000049618
genome : 50,083,593 - 50,089,676 (6,084)
query : 1 - 1,348 (1,348/1,348)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
Zv7_scaffold181
50078634-50094633 W +
(TA)n
Tc1-1_DR
Tc1-1_DR
TDR7
TDR9
HATN17_DR
TDR18
AT_rich
AT_rich
ASAT_CY
Dr000012
AT_rich
AT_rich
TDR18
AT_rich
Dr000752
Dr000465
Dr000751
HATN7_DR
AT_rich
TDR14
HE1_DR1
(TATATG)n
Gypsy3LTR_DR
(TATATG)n
(TG)n
(TA)n
HATN5_DR
Gypsy3LTR_DR
Dr001011
(TATATG)n
(TATATG)n
(TA)n
(TATATG)n
Gypsy3LTR_DR
(TATG)n
(TATATG)n
(TA)n
Dr000838
Dr000250
Dr000250