bases per tick :
2000
1000
500
200
100
50
20
10
5
2
kb first site :
homology :
D.rerio
sequence viewer :
( start, end )
( middle, total length )
= (
,
)
BC055179
Representative transcript
genome : 8,586,258 - 8,615,264 (29,007)
query : 1 - 1,781 (1,781/1,797)
9 exons
identity = 0.992
3'(1.000;0.998;0.930;0.975;1.000;1.000;1.000;
1.000;0.987)5'
coverage = 1.000
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
Ortholog candidate
H.sapiens
(Human) : HIT000036927
Pan
sp. (Chimpanzee) : XM_001156167
Pongo
sp. (Orangutan) : ENSPPYT00000022660
Macaca
sp. (Macaque) : ENSMMUT00000046486
Mus
sp. (Mouse) : BC029241
Rattus
sp. (Rat) : XM_216403
Canis
sp. (Dog) : XM_538745
Equus
sp. (Horse) : XM_001495386
Bos
sp. (Cow) : BC110270
Monodelphis
sp. (Opossum) : XM_001372597
Tetraodon
sp. (Tetraodon) : CR714343
Takifugu
sp. (Fugu) : SINFRUT00000135801
ENSDART00000055566
genome : 8,586,242 - 8,615,264 (29,023)
query : 1 - 1,797 (1,797/1,797)
9 exons
identity = 0.997
3'(1.000;1.000;0.947;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
NM_200471
genome : 8,586,258 - 8,615,264 (29,007)
query : 1 - 1,781 (1,781/1,797)
9 exons
identity = 0.992
3'(1.000;0.998;0.930;0.975;1.000;1.000;1.000;
1.000;0.987)5'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
XM_701297
Representative transcript
genome : 8,615,544 - 8,617,630 (2,087)
query : 1 - 903 (903/903)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
BC133875
Representative transcript
genome : 8,619,319 - 8,622,766 (3,448)
query : 1 - 1,526 (1,526/1,548)
4 exons
identity = 0.995
5'(0.983;1.000)3'
coverage = 1.000
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
Ortholog candidate
H.sapiens
(Human) : HIT000037884
Pan
sp. (Chimpanzee) : XR_020093
Pongo
sp. (Orangutan) : ENSPPYT00000017425
Macaca
sp. (Macaque) : XR_010619
Mus
sp. (Mouse) : BC051117
Rattus
sp. (Rat) : XM_342340
Canis
sp. (Dog) : XM_535693
Equus
sp. (Horse) : XM_001502916
Bos
sp. (Cow) : BC140596
Monodelphis
sp. (Opossum) : ENSMODT00000007477
Gallus
sp. (Chicken) : CR523084
Oryzias
sp. (Medaka) : ENSORLT00000014258
Tetraodon
sp. (Tetraodon) : CR692555
Takifugu
sp. (Fugu) : SINFRUT00000163617
NM_001082799
genome : 8,619,319 - 8,622,766 (3,448)
query : 1 - 1,526 (1,526/1,548)
4 exons
identity = 0.995
5'(0.983;1.000)3'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
BC046040
genome : 8,619,349 - 8,622,055 (2,707)
query : 1 - 775 (775/794)
4 exons
identity = 0.987
5'(0.992;1.000)3'
coverage = 1.000
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
ENSDART00000103406
genome : 8,619,350 - 8,622,766 (3,417)
query : 1 - 1,485 (1,485/1,499)
4 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
Zv7_scaffold13
8580761-8620760 W +