bases per tick :
2000
1000
500
200
100
50
20
10
5
2
kb first site :
homology :
C.familiaris
sequence viewer :
( start, end )
( middle, total length )
= (
,
)
ENSCAFT00000011677
Representative transcript
genome : 8,971,431 - 8,996,550 (25,120)
query : 1 - 2,189 (2,189/2,189)
18 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
Ortholog candidate
H.sapiens
(Human) : HIT000342576
Pan
sp. (Chimpanzee) : XR_024214
Pongo
sp. (Orangutan) : ENSPPYT00000006023
Mus
sp. (Mouse) : AK162182
Rattus
sp. (Rat) : AY325239
Bos
sp. (Cow) : ENSBTAT00000009562
Monodelphis
sp. (Opossum) : ENSMODT00000015999
Gallus
sp. (Chicken) : CR391469
Danio
sp. (Zebrafish) : XM_687198
XM_534643
genome : 8,971,433 - 8,996,550 (25,118)
query : 1 - 2,187 (2,187/2,187)
18 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
XM_534644
Representative transcript
genome : 9,002,601 - 9,027,957 (25,357)
query : 1 - 1,026 (1,026/1,026)
13 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
Ortholog candidate
H.sapiens
(Human) : HIT000261813
Pan
sp. (Chimpanzee) : XM_509469
Pongo
sp. (Orangutan) : ENSPPYT00000006022
Mus
sp. (Mouse) : AK050227
Rattus
sp. (Rat) : BC093380
Equus
sp. (Horse) : XM_001498352
Bos
sp. (Cow) : BC122792
Monodelphis
sp. (Opossum) : XM_001375371
Gallus
sp. (Chicken) : BX935599
Danio
sp. (Zebrafish) : BC076236
Danio
sp. (Zebrafish) : ENSDART00000097244
Oryzias
sp. (Medaka) : ENSORLT00000007404
Tetraodon
sp. (Tetraodon) : CR691423
Takifugu
sp. (Fugu) : SINFRUT00000127843
XM_852662
genome : 9,002,601 - 9,027,957 (25,357)
query : 1 - 897 (897/897)
11 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
XM_852703
genome : 9,002,601 - 9,027,957 (25,357)
query : 1 - 972 (972/972)
12 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
XM_852619
genome : 9,002,601 - 9,024,208 (21,608)
query : 1 - 797 (797/797)
11 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
XM_534645
Representative transcript
genome : 9,029,474 - 9,038,275 (8,802)
query : 16 - 921 (906/921)
8 exons
identity = 0.994
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 0.984
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
Ortholog candidate
H.sapiens
(Human) : HIT000337355
Pan
sp. (Chimpanzee) : ENSPTRT00000010295
Pongo
sp. (Orangutan) : CR858952
Macaca
sp. (Macaque) : AB169786
Mus
sp. (Mouse) : AK133695
Rattus
sp. (Rat) : U05821
Equus
sp. (Horse) : ENSECAT00000022871
Bos
sp. (Cow) : BC122673
Monodelphis
sp. (Opossum) : XM_001375358
Gallus
sp. (Chicken) : BX929929
Danio
sp. (Zebrafish) : BC071346
Danio
sp. (Zebrafish) : XM_001918397
Oryzias
sp. (Medaka) : ENSORLT00000000520
Tetraodon
sp. (Tetraodon) : CR695384
Takifugu
sp. (Fugu) : SINFRUT00000136413
XM_852815
genome : 9,029,474 - 9,038,275 (8,802)
query : 16 - 888 (873/888)
8 exons
identity = 0.994
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 0.983
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
ENSCAFT00000011917
genome : 9,029,462 - 9,038,275 (8,814)
query : 1 - 918 (918/918)
8 exons
identity = 0.995
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
contig_34381
8995279-9035278 W -