bases per tick :
2000
1000
500
200
100
50
20
10
5
2
kb first site :
homology :
C.familiaris
sequence viewer :
( start, end )
( middle, total length )
= (
,
)
XM_843381
Representative transcript
genome : 9,992,373 - 10,011,368 (18,996)
query : 1 - 1,664 (1,664/1,664)
10 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
Ortholog candidate
H.sapiens
(Human) : HIT000425012
Pan
sp. (Chimpanzee) : XM_001141200
Pongo
sp. (Orangutan) : ENSPPYT00000004493
Macaca
sp. (Macaque) : XM_001087199
Mus
sp. (Mouse) : AK133192
Rattus
sp. (Rat) : BC085915
Equus
sp. (Horse) : XM_001488169
Bos
sp. (Cow) : BC105390
Monodelphis
sp. (Opossum) : XM_001368779
Gallus
sp. (Chicken) : BX935153
Danio
sp. (Zebrafish) : BC067627
Oryzias
sp. (Medaka) : ENSORLT00000013716
Tetraodon
sp. (Tetraodon) : CR679972
Takifugu
sp. (Fugu) : SINFRUT00000139825
XM_851136
genome : 9,992,373 - 10,011,368 (18,996)
query : 1 - 1,514 (1,514/1,514)
9 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
ENSCAFT00000006775
genome : 9,992,756 - 10,011,374 (18,619)
query : 1 - 1,288 (1,288/1,288)
10 exons
identity = 0.999
3'(1.000;0.972)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
XM_533976
Representative transcript
genome : 10,013,428 - 10,016,727 (3,300)
query : 1 - 895 (895/895)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
Ortholog candidate
H.sapiens
(Human) : HIT000030797
Pan
sp. (Chimpanzee) : XM_508696
Pongo
sp. (Orangutan) : CR858145
Macaca
sp. (Macaque) : ENSMMUT00000016321
Mus
sp. (Mouse) : AK050165
Rattus
sp. (Rat) : BC087647
Equus
sp. (Horse) : XM_001491451
Bos
sp. (Cow) : BC109659
Monodelphis
sp. (Opossum) : XM_001368838
Gallus
sp. (Chicken) : BX929784
ENSCAFT00000015779
genome : 10,013,480 - 10,016,716 (3,237)
query : 1 - 832 (832/867)
5 exons
identity = 0.998
5'(1.000;0.997;1.000;0.984;1.000)3'
coverage = 0.960
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
ENSCAFT00000040726
Representative transcript
genome : 10,017,598 - 10,017,723 (126)
query : 1 - 126 (126/126)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
ENSCAFT00000040497
Representative transcript
genome : 10,018,956 - 10,019,086 (131)
query : 1 - 131 (131/131)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
ENSCAFT00000033241
Representative transcript
genome : 10,020,003 - 10,020,141 (139)
query : 1 - 139 (139/139)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
ENSCAFT00000040539
Representative transcript
genome : 10,020,378 - 10,020,512 (135)
query : 1 - 135 (135/135)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
ENSCAFT00000033675
Representative transcript
genome : 10,020,813 - 10,020,885 (73)
query : 1 - 73 (73/73)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
ENSCAFT00000034605
Representative transcript
genome : 10,021,234 - 10,021,359 (126)
query : 1 - 126 (126/126)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
ENSCAFT00000040058
Representative transcript
genome : 10,021,645 - 10,021,773 (129)
query : 1 - 129 (129/129)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
contig_28999
10007077-10023076 W -
SINEC_Cf
AT_rich
SINEC_Cf
SINEC_a1
L1_Canis1
AT_rich
L1MC4
L2
SINEC_b1
MIRb
L2
MER45B
SINEC_b1
MER45B
MER45B
SINEC_Cf3
MER45B
(CGAG)n
GC_rich
GC_rich
Looper
SINEC_a1
SINEC_b1
SINEC_Cf
AT_rich