bases per tick :
2000
1000
500
200
100
50
20
10
5
2
kb first site :
homology :
C.familiaris
sequence viewer :
( start, end )
( middle, total length )
= (
,
)
XM_540952
Representative transcript
genome : 16,168,377 - 16,194,476 (26,100)
query : 1 - 1,380 (1,380/1,380)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
Ortholog candidate
H.sapiens
(Human) : HIT000025453
Pan
sp. (Chimpanzee) : XM_001156829
Pongo
sp. (Orangutan) : ENSPPYT00000017499
Macaca
sp. (Macaque) : AB168432
Mus
sp. (Mouse) : AK132722
Rattus
sp. (Rat) : XM_001069558
Equus
sp. (Horse) : ENSECAT00000011257
Bos
sp. (Cow) : BC110266
Monodelphis
sp. (Opossum) : ENSMODT00000015471
Danio
sp. (Zebrafish) : NM_001128732
Takifugu
sp. (Fugu) : AB183682
ENSCAFT00000006316
genome : 16,168,377 - 16,194,068 (25,692)
query : 1 - 975 (975/975)
6 exons
identity = 0.997
3'(1.000;1.000;1.000;1.000;1.000;0.988)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
ENSCAFT00000006329
genome : 16,200,022 - 16,280,368 (80,347)
query : 1 - 2,826 (2,826/2,826)
16 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
XM_843557
Representative transcript
genome : 16,200,022 - 16,280,368 (80,347)
query : 1 - 2,826 (2,826/2,826)
16 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
Ortholog candidate
H.sapiens
(Human) : HIT000001000
Pan
sp. (Chimpanzee) : XM_001156541
Pongo
sp. (Orangutan) : ENSPPYT00000017498
Macaca
sp. (Macaque) : XM_001104977
Mus
sp. (Mouse) : BC125523
Rattus
sp. (Rat) : XM_001070717
Equus
sp. (Horse) : ENSECAT00000012475
Bos
sp. (Cow) : XM_597589
Monodelphis
sp. (Opossum) : ENSMODT00000015458
Gallus
sp. (Chicken) : ENSGALT00000016536
Danio
sp. (Zebrafish) : XM_001345962
Oryzias
sp. (Medaka) : ENSORLT00000009887
Tetraodon
sp. (Tetraodon) : GSTENT00004863001
Takifugu
sp. (Fugu) : SINFRUT00000135225
XM_851621
genome : 16,202,881 - 16,280,368 (77,488)
query : 1 - 2,718 (2,718/2,718)
15 exons
identity = 0.997
3'(0.988;0.974;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
XM_851546
genome : 16,211,792 - 16,280,368 (68,577)
query : 1 - 2,483 (2,483/2,483)
12 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
ENSCAFT00000039268
genome : 16,261,599 - 16,262,345 (747)
query : 1 - 594 (594/594)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
contig_6853
16160195-16290166 W +
367
16290167-16290533 N
contig_6854
16290534-16314304 W +
41
16314305-16314345 N
contig_6855
16314346-16320194 W +