bases per tick :
2000
1000
500
200
100
50
20
10
5
2
kb first site :
homology :
C.familiaris
sequence viewer :
( start, end )
( middle, total length )
= (
,
)
XM_536788
Representative transcript
genome : 79,293,434 - 79,347,857 (54,424)
query : 1 - 3,417 (3,417/3,417)
21 exons
identity = 0.998
3'(1.000;1.000)5'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
Ortholog candidate
H.sapiens
(Human) : HIT000035254
Pan
sp. (Chimpanzee) : XM_001169474
Pongo
sp. (Orangutan) : ENSPPYT00000008865
Macaca
sp. (Macaque) : AB171008
Mus
sp. (Mouse) : BC033273
Rattus
sp. (Rat) : BC098738
Equus
sp. (Horse) : XM_001501012
Bos
sp. (Cow) : BC148083
Monodelphis
sp. (Opossum) : ENSMODT00000018473
Gallus
sp. (Chicken) : AJ720131
Danio
sp. (Zebrafish) : BC128794
Oryzias
sp. (Medaka) : ENSORLT00000016808
Tetraodon
sp. (Tetraodon) : GSTENT00006546001
Takifugu
sp. (Fugu) : SINFRUT00000160311
ENSCAFT00000032047
genome : 79,293,445 - 79,314,015 (20,571)
query : 1 - 3,353 (3,353/3,353)
22 exons
identity = 0.996
3'(1.000;0.951)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
XM_845552
Representative transcript
genome : 79,321,540 - 79,340,968 (19,429)
query : 1 - 2,281 (2,281/2,281)
11 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
Ortholog candidate
H.sapiens
(Human) : HIT000031654
Pan
sp. (Chimpanzee) : XM_001170187
Pongo
sp. (Orangutan) : ENSPPYT00000008863
Macaca
sp. (Macaque) : AB179265
Mus
sp. (Mouse) : AK033235
Rattus
sp. (Rat) : AY751756
Equus
sp. (Horse) : XM_001500964
Bos
sp. (Cow) : BC110249
Monodelphis
sp. (Opossum) : XM_001375578
Gallus
sp. (Chicken) : AJ719463
Danio
sp. (Zebrafish) : BC044541
Oryzias
sp. (Medaka) : ENSORLT00000020298
Tetraodon
sp. (Tetraodon) : CR700818
Takifugu
sp. (Fugu) : SINFRUT00000165542
XM_856819
genome : 79,321,544 - 79,340,968 (19,425)
query : 1 - 2,228 (2,228/2,228)
10 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
XM_856894
genome : 79,321,550 - 79,340,968 (19,419)
query : 1 - 2,261 (2,261/2,261)
10 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
XM_856865
genome : 79,321,610 - 79,340,968 (19,359)
query : 1 - 2,255 (2,255/2,255)
11 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
ENSCAFT00000032057
genome : 79,321,636 - 79,340,382 (18,747)
query : 1 - 1,698 (1,698/1,698)
12 exons
identity = 0.998
5'(1.000;0.962;0.964;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
XM_536790
Representative transcript
genome : 79,348,015 - 79,370,096 (22,082)
query : 1 - 2,578 (2,578/2,578)
12 exons
identity = 1.000
5'(1.000)3'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
XM_856924
genome : 79,348,083 - 79,364,794 (16,712)
query : 1 - 660 (660/660)
7 exons
identity = 1.000
5'(1.000)3'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
ENSCAFT00000032060
genome : 79,348,101 - 79,369,243 (21,143)
query : 1 - 1,651 (1,651/1,651)
12 exons
identity = 0.993
5'(1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
ENSCAFT00000032061
genome : 79,348,101 - 79,369,041 (20,941)
query : 1 - 1,437 (1,437/1,437)
12 exons
identity = 1.000
5'(1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
contig_14465
79311254-79351253 W -