bases per tick :
2000
1000
500
200
100
50
20
10
5
2
kb first site :
homology :
B.taurus
sequence viewer :
( start, end )
( middle, total length )
= (
,
)
ENSBTAT00000048320
genome : 268,446 - 428,656 (160,211)
query : 1 - 2,589 (2,589/2,589)
19 exons
identity = 0.960
5'(0.958;0.988;0.933;0.963;0.911;0.870;1.000;
0.985;0.955;0.872;0.933;0.974;0.989;0.926;
0.969;0.933;0.949;0.994)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
ENSBTAT00000048467
genome : 272,147 - 427,652 (155,506)
query : 1 - 1,639 (1,639/1,647)
13 exons
identity = 0.992
5'(1.000;1.000;0.994;1.000;0.987;1.000;1.000)3'
coverage = 0.995
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
XM_001251182
genome : 403,051 - 405,389 (2,339)
query : 1 - 681 (681/681)
3 exons
identity = 0.981
5'(0.986;0.938;0.991)3'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
XR_028733
Representative transcript
genome : 403,297 - 430,345 (27,049)
query : 1 - 2,274 (2,274/2,274)
20 exons
identity = 0.995
5'(1.000;1.000;1.000;0.963;0.982;1.000;0.963;
1.000;1.000;0.976;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
Ortholog candidate
H.sapiens
(Human) : HIT000218692
Pan
sp. (Chimpanzee) : XM_508612
Pongo
sp. (Orangutan) : ENSPPYT00000029383
Mus
sp. (Mouse) : BC038349
Rattus
sp. (Rat) : XM_001067102
Canis
sp. (Dog) : XM_858447
Equus
sp. (Horse) : XM_001915829
Equus
sp. (Horse) : XM_001917328
Equus
sp. (Horse) : XR_044648
Bos
sp. (Cow) : ENSBTAT00000029943
Bos
sp. (Cow) : ENSBTAT00000031388
Bos
sp. (Cow) : ENSBTAT00000047760
Bos
sp. (Cow) : ENSBTAT00000048426
Monodelphis
sp. (Opossum) : XM_001381034
Gallus
sp. (Chicken) : CR524368
Danio
sp. (Zebrafish) : NM_001045111
Oryzias
sp. (Medaka) : ENSORLT00000000039
Tetraodon
sp. (Tetraodon) : GSTENT00008341001
Takifugu
sp. (Fugu) : SINFRUT00000166054
XM_001256648
genome : 403,297 - 411,706 (8,410)
query : 1 - 1,029 (1,029/1,029)
7 exons
identity = 0.989
5'(1.000;0.994;1.000;0.986;1.000;0.964;1.000)3'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
XM_001256865
genome : 403,297 - 410,399 (7,103)
query : 1 - 753 (753/753)
5 exons
identity = 0.984
5'(1.000;0.976;1.000;0.973;0.985)3'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
ENSBTAT00000048461
genome : 404,602 - 428,656 (24,055)
query : 1 - 2,217 (2,217/2,217)
17 exons
identity = 0.979
5'(1.000;1.000;0.933;0.963;0.935;1.000;0.938;
1.000;0.936;0.957;1.000;1.000;1.000;1.000;
0.909;1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
ENSBTAT00000048455
genome : 405,167 - 427,652 (22,486)
query : 19 - 1,934 (1,916/1,942)
14 exons
identity = 0.966
5'(1.000;0.962;0.982;1.000;0.938;1.000;0.936;
0.876;0.976;0.937;1.000;1.000;0.757;0.974)3'
coverage = 0.987
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
XM_001250868
Representative transcript
genome : 432,267 - 433,541 (1,275)
query : 1 - 562 (562/562)
2 exons
identity = 0.977
3'(0.980;0.972)5'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
AAFC03108153
396821-399602 W +
50
399603-399652 N
AAFC03102603
399653-436820 W +