bases per tick :
2000
1000
500
200
100
50
20
10
5
2
kb first site :
homology :
B.taurus
sequence viewer :
( start, end )
( middle, total length )
= (
,
)
ENSBTAT00000047843
genome : 1,023,255 - 1,114,565 (91,311)
query : 1 - 693 (693/693)
5 exons
identity = 0.991
5'()3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
ENSBTAT00000026901
genome : 1,064,551 - 1,066,699 (2,149)
query : 1 - 1,032 (1,032/1,032)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
BC149635
Representative transcript
genome : 1,064,588 - 1,066,700 (2,113)
query : 2 - 997 (996/1,012)
4 exons
identity = 0.999
5'(1.000;1.000;1.000;0.998)3'
coverage = 0.999
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
Ortholog candidate
H.sapiens
(Human) : HIT000029816
Pan
sp. (Chimpanzee) : XM_001156928
Pongo
sp. (Orangutan) : ENSPPYT00000008169
Mus
sp. (Mouse) : BC132177
Rattus
sp. (Rat) : AY800384
Equus
sp. (Horse) : ENSECAT00000011925
Monodelphis
sp. (Opossum) : XM_001373252
Gallus
sp. (Chicken) : ENSGALT00000003847
Danio
sp. (Zebrafish) : BC088383
Oryzias
sp. (Medaka) : ENSORLT00000009249
Tetraodon
sp. (Tetraodon) : GSTENT00024046001
Takifugu
sp. (Fugu) : SINFRUT00000163184
NM_001102026
genome : 1,064,588 - 1,066,700 (2,113)
query : 2 - 997 (996/1,012)
4 exons
identity = 0.999
5'(1.000;1.000;1.000;0.998)3'
coverage = 0.999
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
XM_866157
Representative transcript
genome : 1,069,772 - 1,071,284 (1,513)
query : 1 - 890 (890/890)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
Ortholog candidate
H.sapiens
(Human) : HIT000030202
Pan
sp. (Chimpanzee) : XM_001157130
Pongo
sp. (Orangutan) : ENSPPYT00000008170
Macaca
sp. (Macaque) : ENSMMUT00000016135
Mus
sp. (Mouse) : BC008155
Rattus
sp. (Rat) : BC085808
Canis
sp. (Dog) : XM_547210
Equus
sp. (Horse) : XM_001497211
Monodelphis
sp. (Opossum) : XM_001373277
Gallus
sp. (Chicken) : ENSGALT00000034473
Danio
sp. (Zebrafish) : BC071549
Oryzias
sp. (Medaka) : ENSORLT00000014048
Tetraodon
sp. (Tetraodon) : CR650287
Takifugu
sp. (Fugu) : SINFRUT00000158592
ENSBTAT00000003200
genome : 1,069,772 - 1,071,277 (1,506)
query : 1 - 883 (883/883)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
ENSBTAT00000003211
Representative transcript
genome : 1,071,676 - 1,075,555 (3,880)
query : 1 - 1,726 (1,726/1,726)
14 exons
identity = 0.998
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.934;1.000;1.000;1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
Ortholog candidate
H.sapiens
(Human) : HIT000052649
Pan
sp. (Chimpanzee) : XR_022321
Pongo
sp. (Orangutan) : ENSPPYT00000008172
Macaca
sp. (Macaque) : XM_001118534
Mus
sp. (Mouse) : AK140238
Rattus
sp. (Rat) : ENSRNOT00000020363
Canis
sp. (Dog) : XM_547209
Equus
sp. (Horse) : XM_001915344
Monodelphis
sp. (Opossum) : ENSMODT00000021321
Danio
sp. (Zebrafish) : XM_001919778
XM_589253
genome : 1,071,726 - 1,075,555 (3,830)
query : 1 - 1,849 (1,849/1,849)
13 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
BC120447
Representative transcript
genome : 1,076,172 - 1,078,802 (2,631)
query : 1 - 1,832 (1,832/1,858)
5 exons
identity = 0.999
5'(1.000;1.000;1.000;0.998;1.000)3'
coverage = 1.000
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
NM_001075540
genome : 1,076,172 - 1,078,802 (2,631)
query : 1 - 1,832 (1,832/1,858)
5 exons
identity = 0.999
5'(1.000;1.000;1.000;0.998;1.000)3'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
ENSBTAT00000003220
genome : 1,076,172 - 1,078,550 (2,379)
query : 1 - 1,067 (1,067/1,067)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
AAFC03000824
1062528-1078527 W +
BovB
BTLTR1
BovB
L1MB3
Bov-tA1
GC_rich
GC_rich
L2
L2a
GC_rich
CHRL
tRNA-Glu-GAA
GC_rich
G-rich