bases per tick :
2000
1000
500
200
100
50
20
10
5
2
kb first site :
homology :
B.taurus
sequence viewer :
( start, end )
( middle, total length )
= (
,
)
BC103416
Representative transcript
genome : 44,521,762 - 44,549,890 (28,129)
query : 1 - 2,031 (2,031/2,098)
18 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;0.993;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
Ortholog candidate
H.sapiens
(Human) : HIT000049155
Pongo
sp. (Orangutan) : CR861307
Macaca
sp. (Macaque) : AB169653
Mus
sp. (Mouse) : AK031081
Rattus
sp. (Rat) : BC062005
Canis
sp. (Dog) : XM_862867
Equus
sp. (Horse) : XM_001490607
Monodelphis
sp. (Opossum) : XM_001365130
Gallus
sp. (Chicken) : AJ719291
Danio
sp. (Zebrafish) : BC121194
Danio
sp. (Zebrafish) : BC044450
Oryzias
sp. (Medaka) : ENSORLT00000000310
Oryzias
sp. (Medaka) : ENSORLT00000017655
Tetraodon
sp. (Tetraodon) : CR673534
Tetraodon
sp. (Tetraodon) : CR724183
Takifugu
sp. (Fugu) : SINFRUT00000145974
Takifugu
sp. (Fugu) : SINFRUT00000159975
NM_001040471
genome : 44,521,762 - 44,549,890 (28,129)
query : 1 - 2,031 (2,031/2,098)
18 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;0.993;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
ENSBTAT00000008386
genome : 44,521,762 - 44,549,889 (28,128)
query : 1 - 2,030 (2,030/2,030)
18 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
AF043228
genome : 44,533,060 - 44,545,562 (12,503)
query : 13 - 255 (243/255)
5 exons
identity = 0.992
5'(0.978;1.000;1.000;1.000;0.975)3'
coverage = 0.953
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
ENSBTAT00000044674
genome : 44,533,060 - 44,545,562 (12,503)
query : 13 - 252 (240/252)
5 exons
identity = 0.984
5'(1.000;1.000;1.000;1.000;0.900)3'
coverage = 0.952
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
ENSBTAT00000003327
genome : 44,554,944 - 44,573,222 (18,279)
query : 1 - 1,178 (1,178/1,178)
7 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
BC113311
Representative transcript
genome : 44,554,955 - 44,573,211 (18,257)
query : 1 - 1,095 (1,095/1,124)
6 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 0.999
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
Ortholog candidate
H.sapiens
(Human) : HIT000032634
Pan
sp. (Chimpanzee) : ENSPTRT00000046906
Pongo
sp. (Orangutan) : ENSPPYT00000011443
Macaca
sp. (Macaque) : XM_001090900
Mus
sp. (Mouse) : AK077948
Rattus
sp. (Rat) : ENSRNOT00000028674
Canis
sp. (Dog) : XM_541708
Equus
sp. (Horse) : XM_001490631
Monodelphis
sp. (Opossum) : XM_001364985
Gallus
sp. (Chicken) : ENSGALT00000008021
Danio
sp. (Zebrafish) : BC046049
Oryzias
sp. (Medaka) : ENSORLT00000001002
Tetraodon
sp. (Tetraodon) : CR645396
Takifugu
sp. (Fugu) : SINFRUT00000165507
XM_583577
genome : 44,554,963 - 44,573,222 (18,260)
query : 1 - 1,159 (1,159/1,159)
7 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
AAFC03021952
44515826-44521397 W +
50
44521398-44521447 N
AAFC03021953
44521448-44554067 W -
AAFC03026780
44554068-44555825 W +