bases per tick :
2000
1000
500
200
100
50
20
10
5
2
kb first site :
homology :
B.taurus
sequence viewer :
( start, end )
( middle, total length )
= (
,
)
XM_001249770
genome : 31,366,426 - 31,420,996 (54,571)
query : 1 - 1,230 (1,230/1,230)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
ENSBTAT00000016102
Representative transcript
genome : 31,366,471 - 31,506,621 (140,151)
query : 1 - 2,943 (2,943/2,943)
20 exons
identity = 0.995
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.917;0.983;1.000;1.000;1.000;
0.987;0.955;1.000;1.000;1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
Ortholog candidate
H.sapiens
(Human) : HIT000027082
Pan
sp. (Chimpanzee) : XM_517433
Macaca
sp. (Macaque) : XM_001082449
Mus
sp. (Mouse) : AK160155
Rattus
sp. (Rat) : BC081895
Canis
sp. (Dog) : XM_533293
Equus
sp. (Horse) : XM_001501711
Monodelphis
sp. (Opossum) : XM_001365068
Gallus
sp. (Chicken) : CR406827
Danio
sp. (Zebrafish) : BC134187
Oryzias
sp. (Medaka) : ENSORLT00000022475
Tetraodon
sp. (Tetraodon) : GSTENT00029916001
Takifugu
sp. (Fugu) : SINFRUT00000134843
ENSBTAT00000029762
genome : 31,366,603 - 31,506,621 (140,019)
query : 1 - 2,529 (2,529/2,529)
18 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
BC149580
Representative transcript
genome : 31,425,818 - 31,427,338 (1,521)
query : 2 - 1,548 (1,547/1,570)
1 exon
identity = 0.966
5'(0.966)3'
coverage = 0.995
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
NM_001105478
genome : 31,425,818 - 31,427,338 (1,521)
query : 2 - 1,548 (1,547/1,570)
1 exon
identity = 0.966
5'(0.966)3'
coverage = 0.995
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
ENSBTAT00000029758
genome : 31,425,873 - 31,426,175 (303)
query : 1 - 303 (303/303)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
XM_593549
genome : 31,465,746 - 31,516,138 (50,393)
query : 1 - 2,962 (2,962/2,962)
14 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
AAFC03059272
31356546-31435708 W -
500
31435709-31436208 N
AAFC03004976
31436209-31454643 W +
724
31454644-31455367 N
AAFC03004975
31455368-31459581 W +
50
31459582-31459631 N
AAFC03004977
31459632-31516545 W -