bases per tick :
2000
1000
500
200
100
50
20
10
5
2
kb first site :
homology :
B.taurus
sequence viewer :
( start, end )
( middle, total length )
= (
,
)
BC123830
genome : 15,845,807 - 15,850,976 (5,170)
query : 6 - 2,019 (2,014/2,043)
3 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 0.998
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
BT020827
Representative transcript
genome : 15,845,808 - 15,851,855 (6,048)
query : 1 - 2,097 (2,097/2,097)
4 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
Ortholog candidate
H.sapiens
(Human) : HIT000270998
Pan
sp. (Chimpanzee) : ENSPTRT00000002674
Pongo
sp. (Orangutan) : ENSPPYT00000000868
Macaca
sp. (Macaque) : ENSMMUT00000000136
Mus
sp. (Mouse) : AK009760
Rattus
sp. (Rat) : BC101913
Canis
sp. (Dog) : XM_849873
Equus
sp. (Horse) : ENSECAT00000001162
Monodelphis
sp. (Opossum) : XM_001374724
Tetraodon
sp. (Tetraodon) : CR690050
Tetraodon
sp. (Tetraodon) : GSTENT00019328001
Takifugu
sp. (Fugu) : SINFRUT00000182723
ENSBTAT00000012416
genome : 15,845,808 - 15,851,855 (6,048)
query : 1 - 2,097 (2,097/2,097)
4 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
NM_001014920
genome : 15,845,808 - 15,851,855 (6,048)
query : 1 - 2,097 (2,097/2,097)
4 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
BC134680
Representative transcript
genome : 15,853,588 - 15,881,262 (27,675)
query : 1 - 4,518 (4,518/4,543)
22 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.999)3'
coverage = 1.000
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
Ortholog candidate
H.sapiens
(Human) : HIT000000806
Pan
sp. (Chimpanzee) : ENSPTRT00000049017
Pongo
sp. (Orangutan) : ENSPPYT00000000869
Macaca
sp. (Macaque) : ENSMMUT00000000134
Mus
sp. (Mouse) : AK129286
Rattus
sp. (Rat) : XM_001059906
Canis
sp. (Dog) : XM_547535
Equus
sp. (Horse) : XM_001500077
Monodelphis
sp. (Opossum) : XM_001374691
Gallus
sp. (Chicken) : XM_423228
Danio
sp. (Zebrafish) : BC096955
Oryzias
sp. (Medaka) : ENSORLT00000020331
Tetraodon
sp. (Tetraodon) : GSTENT00019522001
Takifugu
sp. (Fugu) : SINFRUT00000127468
NM_001083679
genome : 15,853,588 - 15,881,262 (27,675)
query : 1 - 4,518 (4,518/4,543)
22 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.999)3'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
ENSBTAT00000012415
genome : 15,853,714 - 15,879,921 (26,208)
query : 1 - 3,051 (3,051/3,051)
22 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
ENSBTAT00000048196
Representative transcript
genome : 15,878,525 - 15,881,129 (2,605)
query : 1 - 63 (63/63)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
NM_001046225
genome : 15,882,488 - 15,887,020 (4,533)
query : 1 - 1,527 (1,527/1,527)
8 exons
identity = 0.988
5'(1.000;1.000;1.000;0.923;0.984;1.000;1.000;
1.000)3'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
BC112862
Representative transcript
genome : 15,882,546 - 15,887,374 (4,829)
query : 2 - 1,342 (1,341/1,473)
5 exons
identity = 0.975
5'(1.000;1.000;0.966;0.797;0.997)3'
coverage = 0.999
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
Ortholog candidate
H.sapiens
(Human) : HIT000259850
Pan
sp. (Chimpanzee) : XM_001164805
Pongo
sp. (Orangutan) : CR859438
Macaca
sp. (Macaque) : AB171221
Mus
sp. (Mouse) : AK139144
Rattus
sp. (Rat) : XM_001059976
Equus
sp. (Horse) : ENSECAT00000022658
Monodelphis
sp. (Opossum) : ENSMODT00000021472
Gallus
sp. (Chicken) : BX929680
Danio
sp. (Zebrafish) : XM_694084
Oryzias
sp. (Medaka) : ENSORLT00000020336
Takifugu
sp. (Fugu) : SINFRUT00000127469
ENSBTAT00000048192
genome : 15,882,546 - 15,887,367 (4,822)
query : 1 - 1,337 (1,337/1,337)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
ENSBTAT00000012413
genome : 15,882,546 - 15,886,677 (4,132)
query : 1 - 1,131 (1,131/1,131)
6 exons
identity = 0.999
5'(1.000;1.000;0.998;1.000;1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
ENSBTAT00000012414
genome : 15,884,955 - 15,886,902 (1,948)
query : 1 - 939 (939/939)
5 exons
identity = 0.996
5'(0.941;1.000;1.000;1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
AAFC03034247
15847425-15881558 W +
AAFC03046108
15881559-15884817 W -
AAFC03034244
15884818-15887424 W -