*--------------------------------------------------------------------------------------------------* Release information of H-InvDB_1.8 http://www.h-invitational.jp Released on 1st December, 2004. *--------------------------------------------------------------------------------------------------* --------------------------- Datasets --------------------------- 1. human full-length cDNA data set The dataset contains sequences produced by six institutes. All the sequences are already in DDBJ/EMBL/GenBank. cDNA dataset fixed on 15th July, 2002 2. human genome dataset Human genome assembly was provided by NCBI (build 34). Human genome dataset fixed on 1st September, 2003 --------------------------- Databases --------------------------- 1. RefSeq mRNA RefSeq curated mRNAs were obtained from NCBI on 1st September, 2003. 2. non-redundant SWISS-PROT/TrEMBL/TrEMBL_new Non-redundant SWISS-PROT/TrEMBL/TrEMBLnew set in the external version kindly provided by EBI for H-Invitational annotation jamboree. The following redundancy steps were applied: -All tremblnew entries 100% identical to SWISS-PROT and TrEMBL removed -All tremblnew entries which are updates of SWISS-PROT and TrEMBL removed -All tremblnew entries which are 100% fragment matches of SWISS-PROT and TrEMBL removed. -About human and mouse entries, the non-redundant set was created from SWISS-PROT, TrEMBL and TrEMBLnew, all with cDNA/mRNA supporting evidence. Additional splice variants are also included. These data sets are used for similarity search (fasty & blastx). Protein dataset fixed on 15th July, 2002 3. HUGO approved gene symbol (GENEW) http://www.gene.ucl.ac.uk/nomenclature/ Human gene name data fixed on 15th July, 2002. *--------------------------------------------------------------------------------------------------*