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	Release information of H-InvDB_6.2 

	http://www.h-invitational.jp
	
	Dataset fixed on February 13, 2009.
	Released on March 30, 2009.
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H-InvDB statistics
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1. number of H-Invitational transcripts (HIT)

	all HIT: 219,765
	* protein coding transcripts: 198,062
	* non-protein-coding transcripts: 20,380
	* psudogene candidates: 1,323

2. number of H-Invitational clusters (HIX)

	all HIX: 43,159
	* protein coding transcripts: 34,511
	* non-protein-coding transcripts: 7,747
	* psudogene candidates: 901
	
3. number of H-Invitational proteins (HIP)

	all HIP: 133,629
	
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Human nucleotide datasets
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1. Human full-length cDNA dataset
The dataset contains sequences produced by six institutes. 
All the sequences are already in DDBJ/EMBL/GenBank.

2. Human mRNA dataset
Human mRNA sequences registered in DDBJ/EMBL/GenBank other than full-length cDNA 
were extracted from DDBJ release 73 obtained on May 9, 2008.

3. Human genome dataset
Repeat masked human genome assembly NCBI build 36.2 was obtained from UCSC.
(UCSC hg18, Mar. 2006: human genome NCBI b36.2)

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Databases
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1. RefSeq mRNA
RefSeq curated mRNAs were obtained from NCBI on May 9, 2008.
(RefSeq release 23)

2. Ensembl transcripts
Ensembl transcripts were obtained from Ensembl on May 9, 2008.
Ensembl [release 49] [NCBI36.49]

2. RefSeq protein
RefSeq proteins were obtained from NCBI on May 9, 2008.
(RefSeq release 29)

3. UniProt(SWISS-PROT/TrEMBL)
UniProt(SWISS-PROT/TrEMBL) entries were obtained from EBI on May 9, 2008.

4. HUGO approved gene symbol  http://www.gene.ucl.ac.uk/nomenclature/
Human gene name data fixed on February 13, 2009.

5. Entrez Gene database http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=gene
Relations of H-InvDB genes to Entrez Genes were fixed on February 13, 2009.

6. dbSNP 
Relations of H-InvDB genes to dbSNP build128 were fixed on November 15, 2007.

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