Human (mRNA) vs Mouse, Rat, Chimpanzee, Macaque and Dog genome

Chromosome HIX HUGO Definition AS pattern
AS affecting function

Cassette

Internal acceptor

Internal donor

Mutually exclusive

Retained intron

Alternative first exon

Alternative last exon

5'-end AS

3'-end AS
Not mapped to human-(other species) genome alignment
chr15
HIX0000004
WASH7P
WAS protein family homolog 2 (Protein FAM39B) (CXYorf1-like protein on chromosome 2).

Cassette

Internal acceptor

Internal donor

Mutually exclusive

Retained intron

Alternative first exon

Alternative last exon

Protein motif
Subcellular localization signal
Mouse
Rat
Macaque
Dog
chr1
HIX0000172

Conserved hypothetical protein.

Retained intron

Mouse
Rat
Macaque
chr1
HIX0000173
NBPF1
Neuroblastoma breakpoint family member 1.

Alternative first exon

Alternative last exon

Mouse
chr1
HIX0000216
CAMK2N1
Calcium/calmodulin-dependent protein kinase II inhibitor 1.

Alternative first exon

Subcellular localization signal
Chimpanzee
chr1
HIX0000985
NBPF24
Neuroblastoma breakpoint family repeat containing protein.

Cassette

Internal acceptor

Internal donor

Protein motif
Subcellular localization signal
Mouse
Rat
Chimpanzee
Dog
chr1
HIX0000992

Conserved hypothetical protein.

Internal donor

Retained intron

Subcellular localization signal
Mouse
Rat
Dog
chr1
HIX0000998
FAM91A2
Conserved hypothetical protein.

Cassette

Mutually exclusive

Alternative last exon

Mouse
Rat
Dog
chr1
HIX0001566
C1orf97
Conserved hypothetical protein.

Alternative last exon

Mouse
Rat
chr2
HIX0001832

Hypothetical protein.

Internal acceptor

Rat
chr2
HIX0001836
FAM84A
Similar to Protein FAM84A (Neurologic sensory protein 1) (NSE1).

Retained intron

Subcellular localization signal
Chimpanzee
chr2
HIX0002041

Hypothetical short protein.

Cassette

Chimpanzee
chr2
HIX0002146
OR7E91P
Similar to Olfactory receptor (Fragment).

Internal donor

Mouse
Rat
Chimpanzee
Macaque
Dog
chr1
HIX0002394
WASH7P
Similar to WAS protein family homolog 1.

Cassette

Internal acceptor

Internal donor

Retained intron

Alternative first exon

Subcellular localization signal
Mouse
Rat
Chimpanzee
Macaque
Dog
chr2
HIX0002395
DDX11L2
Pseudogene candidate (Similar to DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11 isoform 3.).

Internal acceptor

Retained intron

Subcellular localization signal
Chimpanzee
Macaque
Dog
chr2
HIX0002456
C2orf14
Similar to Fatty acyl-CoA reductase 2 (EC 1.2.1.-) (Male sterility domain- containing protein 1).

Retained intron

Subcellular localization signal
Mouse
Rat
Chimpanzee
Macaque
Dog
chr2
HIX0002997

Conserved hypothetical protein.

Retained intron

Rat
chr3
HIX0003224
ZNF501
Zinc finger, C2H2-type domain containing protein.

Retained intron

Protein motif
GO
Mouse
Rat
chr3
HIX0003675

Hypothetical protein.

Internal acceptor

Dog
chr3
HIX0003899

Similar to Eukaryotic initiation factor 4A-II (EC 3.6.1.-) (ATP-dependent RNA helicase eIF4A-2) (eIF4A-II) (eIF-4A-II).

Internal donor

Mouse
chr3
HIX0003935
RPL39L
60S ribosomal protein L39-like (L39-2).

Cassette

Mouse
Rat
chr4
HIX0004045

Conserved hypothetical protein.

Internal acceptor

Internal donor

Retained intron

Macaque
chr4
HIX0004066
MRFAP1L1
Similar to MORF4 family-associated protein 1-like 1.

Internal donor

Rat
Dog
chr4
HIX0004068

Similar to Plus agglutinin.

Internal donor

Mouse
Rat
chr4
HIX0004287
CXCL2
Macrophage inflammatory protein 2-alpha precursor (MIP2-alpha) (C-X-C motif chemokine 2) (Growth-regulated protein beta) (Gro-beta) [Contains: GRO-beta(5-73) (GRO-beta-T) (SB-251353) (Hematopoietic synergistic factor) (HSF)].

Internal acceptor

Internal donor

Retained intron

Subcellular localization signal
Mouse
Rat
Dog
chr4
HIX0004293

Hypothetical short protein.

Cassette

Mutually exclusive

Alternative last exon

Rat
chr4
HIX0004587
LRAT
Lecithin retinol acyltransferase (EC 2.3.1.135) (Phosphatidylcholine-- retinol O-acyltransferase).

Retained intron

Alternative first exon

Chimpanzee
chr4
HIX0004677

Hypothetical short protein.

Cassette

Rat
chr5
HIX0004739

Hypothetical short protein.

Alternative first exon

Rat
chr5
HIX0004841
C5orf39
Hypothetical protein.

Internal donor

Subcellular localization signal
Mouse
Rat
Dog
chr5
HIX0005250
PCDHB13
Protocadherin beta-13 precursor (PCDH-beta-13).

Retained intron

Protein motif
GO
Subcellular localization signal
Mouse
Rat
Chimpanzee
Dog
chr6_mann_hap4
HIX0005685
ZNRD1
Zinc ribbon domain containing 1.

Retained intron

Mouse
Rat
Chimpanzee
Macaque
Dog
chr6
HIX0005700
MDC1
Similar to Mediator of DNA-damage checkpoint 1.

Cassette

Internal acceptor

Internal donor

Retained intron

Alternative first exon

Protein motif
Subcellular localization signal
Macaque
chr6_cox_hap2
HIX0005709
MUC21
RecName: Full=Mucin-21; Short=MUC-21; AltName: Full=Epiglycanin; Flags: Precursor;

Internal donor

Retained intron

Subcellular localization signal
Mouse
Rat
Chimpanzee
Macaque
Dog
chr6_qbl_hap6
HIX0005717
MICA
MHC class I chain-related gene A protein.

Internal acceptor

Alternative first exon

Subcellular localization signal
Mouse
Macaque
chr6_qbl_hap6
HIX0005727
C6orf25
G6B protein isoform G6b-A precursor.

Cassette

Internal acceptor

Retained intron

Transmembrane domain
Mouse
Rat
Chimpanzee
Macaque
Dog
chr6
HIX0005747
AGPAT1
1-acylglycerol-3-phosphate O-acyltransferase 1.

Cassette

Internal acceptor

Internal donor

Retained intron

Alternative first exon

Protein motif
GO
Subcellular localization signal
Transmembrane domain
Mouse
Rat
Chimpanzee
Macaque
Dog
chr6
HIX0005749
AGER
Advanced glycosylation end product-specific receptor isoform 1 precursor.

Retained intron

Subcellular localization signal
Mouse
Rat
Chimpanzee
Dog
chr6
HIX0005876
BYSL
Bystin.

Retained intron

Protein motif
Rat
Chimpanzee
chr7
HIX0006423

Hypothetical protein.

Cassette

Internal donor

Retained intron

Subcellular localization signal
Mouse
chr7
HIX0006708
ZNF680
Krueppel-associated box domain containing protein.

Cassette

Alternative last exon

Protein motif
GO
Subcellular localization signal
Mouse
Dog
chr7
HIX0006758
CLDN4
Claudin-4 (Clostridium perfringens enterotoxin receptor) (CPE- receptor) (CPE-R) (Williams-Beuren syndrome chromosomal region 8 protein).

Alternative first exon

Chimpanzee
chr7
HIX0006769
STAG3L3
Similar to Postmeiotic segregation increased 2-like protein 8 (PMS2-related protein 2).

Cassette

Retained intron

Mouse
Rat
Macaque
Dog
chr7
HIX0006774
SPDYE8P
Similar to Uncharacterized protein ENSP00000304656.

5'-end AS

Mouse
Rat
Chimpanzee
Macaque
chr7
HIX0006793
POMZP3
POM121 and ZP3 fusion protein (POM-ZP3).

Cassette

Internal donor

Protein motif
Subcellular localization signal
Mouse
Chimpanzee
Macaque
Dog
chr1
HIX0007269

Hypothetical protein.

Cassette

Internal acceptor

Internal donor

Retained intron

Alternative first exon

Alternative last exon

Subcellular localization signal
Mouse
Rat
Macaque
chr8
HIX0007287

Conserved hypothetical protein.

Cassette

Retained intron

Alternative last exon

Mouse
Macaque
Dog
chr8
HIX0007289
FAM86B2
Similar to Protein FAM86A.

Cassette

Internal donor

Retained intron

Alternative first exon

Subcellular localization signal
Mouse
Rat
Chimpanzee
Macaque
Dog
chr8
HIX0007828
LY6K
Lymphocyte antigen 6 complex, locus K (Lymphocyte antigen 6 complex, locus K, isoform CRA_b).

Retained intron

Subcellular localization signal
Mouse
Rat
chr9
HIX0008055

Conserved hypothetical protein.

Internal donor

Alternative last exon

Mouse
Rat
Macaque
Dog
chr9
HIX0008056

Conserved hypothetical protein.

Internal acceptor

Retained intron

Alternative last exon

Mouse
Rat
Chimpanzee
Macaque
Dog
chr9
HIX0008062
FAM27E3
Conserved hypothetical protein.

Retained intron

Subcellular localization signal
Mouse
Rat
Chimpanzee
Macaque
Dog
chr9
HIX0008068

Pseudogene candidate (Similar to Protein FRG1 (FSHD region gene 1 protein).).

Cassette

Internal donor

Alternative last exon

Mouse
Rat
Macaque
Dog
chr9
HIX0008074

Keratinocyte growth factor-like protein 1.

3'-end AS

Mouse
Rat
Macaque
Dog
chr9
HIX0008298
NCRNA00256B
Conserved hypothetical protein.

Retained intron

Mouse
Rat
chr9
HIX0008442
DOLK
Transmembrane protein 15.

Internal acceptor

Internal donor

Transmembrane domain
Macaque
chr9
HIX0008532

Hypothetical short protein.

Cassette

Mouse
chr10
HIX0008768

Zinc finger, C2H2-type domain containing protein.

Cassette

Alternative last exon

Rat
Dog
chr10
HIX0008821
CTGLF9P
Similar to Centaurin-gamma-2 (ARF-GAP with GTP-binding protein-like, ankyrin repeat and pleckstrin homology domains 1) (AGAP-1) (GTP-binding and GTPase-activating protein 1) (GGAP1).

Cassette

Subcellular localization signal
Mouse
Rat
Dog
chr10
HIX0009026

Pseudogene candidate (Similar to NUAK family SNF1-like kinase 2 (EC 2.7.11.1) (SNF1/AMP kinase-related kinase) (SNARK).).

Cassette

Mouse
chr11
HIX0009631
APLNR
Apelin receptor (G-protein coupled receptor APJ) (Angiotensin receptor-like 1) (HG11).

Internal donor

Retained intron

Chimpanzee
chr11
HIX0009901
FAM86C
Similar to Chitobiosyldiphosphodolichol beta-mannosyltransferase (EC 2.4.1.142) (GDP-mannose-dolichol diphosphochitobiose mannosyltransferase) (GDP- Man:GlcNAc2-PP-dolichol mannosyltransferase) (Beta-1,4- mannosyltransferase) (Mannosyltransferase-1) (MT-1) (Hmat-1) (Asparagine-linked glycosylation protein 1).

Cassette

Internal donor

Mutually exclusive

Mouse
Rat
Chimpanzee
Macaque
Dog
chr12
HIX0010405
FAM66C
Similar to Beta-defensin 109 precursor (Defensin, beta 109).

Cassette

Internal acceptor

Internal donor

Mutually exclusive

Alternative last exon

Rat
chr12
HIX0010915
GOLGA2B
Golgin subfamily A member 2-like protein 1.

Cassette

Internal acceptor

Internal donor

Retained intron

Alternative last exon

Mouse
Rat
Dog
chr12
HIX0011132

Hypothetical short protein.

Cassette

Macaque
chr13
HIX0011166

Pseudogene candidate (Similar to Mitochondrial intermediate peptidase, mitochondrial precursor (EC 3.4.24.59) (MIP).).

Internal acceptor

Internal donor

Alternative last exon

Mouse
Macaque
chr15
HIX0012187
CKMT1B
Creatine kinase, ubiquitous mitochondrial precursor (EC 2.7.3.2) (U- MtCK) (Mia-CK) (Acidic-type mitochondrial creatine kinase).

Internal acceptor

Internal donor

Retained intron

Alternative first exon

Protein motif
GO
Subcellular localization signal
Mouse
Rat
Chimpanzee
Macaque
Dog
chr15
HIX0012614
C15orf51
Pseudogene candidate (Similar to Golgin subfamily A member 2 (Cis-Golgi matrix protein GM130) (Gm130 autoantigen) (Golgin-95).).

Cassette

Internal acceptor

Retained intron

Subcellular localization signal
Mouse
Rat
Macaque
Dog
chr16
HIX0012907

Hypothetical protein.

Internal donor

Mouse
Rat
Dog
chr16
HIX0012969
ZNF843
Similar to PR domain containing 9 (MGC21428-like protein).

3'-end AS

Rat
chr16
HIX0013313

Hypothetical short protein.

Cassette

Alternative last exon

Rat
chr16
HIX0013337

Conserved hypothetical protein.

Retained intron

Dog
chr17
HIX0013433
GSG2
Serine/threonine-protein kinase haspin (EC 2.7.11.1) (Haploid germ cell-specific nuclear protein kinase) (H-haspin) (Germ cell-specific gene 2 protein).

Internal acceptor

Internal donor

Alternative last exon

Protein motif
GO
Subcellular localization signal
Rat
chr17
HIX0013686
LRRC37B2
Pseudogene candidate (Similar to Leucine-rich repeat-containing protein 37B precursor (C66 SLIT-like testicular protein).).

Retained intron

Mouse
Rat
Chimpanzee
Dog
chr17
HIX0013872
TMEM101
Transmembrane protein 101 (Putative NF-kappa-B-activating protein 130).

Internal donor

Alternative first exon

Macaque
chr17
HIX0013903
C17orf69
Conserved hypothetical protein.

Retained intron

Chimpanzee
Macaque
chr17
HIX0014282
ZNF750
Protein ZNF750.

Internal acceptor

Rat
chr18
HIX0014527
ZADH2
Alcohol dehydrogenase superfamily, zinc-containing protein.

Alternative first exon

Chimpanzee
Macaque
chr19
HIX0014674
FUT6
Alpha-(1,3)-fucosyltransferase (EC 2.4.1.65) (Galactoside 3-L- fucosyltransferase) (Fucosyltransferase 6) (FucT-VI).

Cassette

Internal donor

Retained intron

Alternative last exon

Protein motif
GO
Subcellular localization signal
Mouse
Rat
chr19
HIX0014777
ZNF627
Similar to Gonadotropin inducible ovarian transcription factor 1.

Internal acceptor

Dog
chr19
HIX0014783
ZNF439
Similar to Gonadotropin inducible ovarian transcription factor 2 alpha.

Alternative first exon

Mouse
Dog
chr19
HIX0014941
TSSK6
Testis-specific serine/threonine-protein kinase 6 (EC 2.7.11.1) (TSSK- 6) (Small serine/threonine kinase) (Serine/threonine-protein kinase SSTK) (Cancer/testis antigen 72) (CT72).

Internal acceptor

Internal donor

Macaque
chr19
HIX0014961
ZNF208
Conserved hypothetical protein.

Cassette

Alternative last exon

Protein motif
GO
Subcellular localization signal
Rat
Dog
chr19
HIX0015057
COX7A1
Cytochrome c oxidase polypeptide VIIa-heart, mitochondrial precursor (Cytochrome c oxidase subunit VIIa-H) (COX VIIa-M).

5'-end AS

Protein motif
Rat
chr19
HIX0015062

Hypothetical short protein.

Cassette

Internal acceptor

Alternative last exon

Mouse
Rat
chr19
HIX0015209
ZNF229
Similar to PR domain containing 9.

Internal donor

Alternative first exon

Rat
chr19
HIX0015281
TPRX1
Tetra-peptide repeat homeobox.

Retained intron

Mouse
Rat
Dog
chr20
HIX0015701

Hypothetical protein.

Internal acceptor

Internal donor

Alternative first exon

Chimpanzee
chr20
HIX0015762

Protein of unknown function DUF1669 family protein.

Cassette

Internal acceptor

Internal donor

Subcellular localization signal
Rat
chr21
HIX0016023
TPTE
Transmembrane phosphatase with tensin homology isoform alpha.

Cassette

Mouse
Rat
Macaque
Dog
chr21
HIX0016183
NCRNA00175
Conserved hypothetical protein.

Internal donor

Chimpanzee
chr14
HIX0016200
DUXAP10
Similar to Double homeobox A.

Cassette

Internal acceptor

Alternative last exon

Mouse
Rat
Macaque
Dog
chr22
HIX0016257
DGCR6L
DiGeorge syndrome critical region gene 6 like.

Cassette

Retained intron

Alternative first exon

Subcellular localization signal
Mouse
Chimpanzee
Dog
chr22
HIX0016271
POM121L8P
Similar to Breakpoint cluster region protein (Fragment).

Internal acceptor

Alternative first exon

Rat
Chimpanzee
Macaque
Dog
chr22
HIX0016308
POM121L9P
POM121-like.

Cassette

Internal donor

Dog
chr22
HIX0016623
RPL23AP82
Ribosomal protein L23/L25, N-terminal domain containing protein.

Cassette

Internal donor

Retained intron

Alternative first exon

Alternative last exon

Subcellular localization signal
Mouse
Dog
chrX
HIX0016709
MAGEB6
Melanoma-associated antigen B6 (MAGE-B6 antigen) (Cancer/testis antigen 3.4) (CT3.4).

Retained intron

Subcellular localization signal
Mouse
Rat
chrX
HIX0017076
CT45A4
Cancer/testis antigen 45-2 (CT45-2).

Cassette

Internal donor

Alternative first exon

Alternative last exon

Mouse
Rat
Chimpanzee
Macaque
chrY
HIX0017179
XGPY2
40S ribosomal protein S4, Y isoform 1.

Cassette

Retained intron

Alternative last exon

Subcellular localization signal
Rat
Dog
chrY
HIX0017193
CYorf15B
Pseudogene candidate (Similar to Gamma-taxilin (Lipopolysaccharide-specific response protein 5).).

Cassette

Internal acceptor

Internal donor

Alternative first exon

Rat
Macaque
Dog
chr16
HIX0017288

Conserved hypothetical protein.

Cassette

Retained intron

Alternative first exon

Mouse
Rat
Dog
chr5
HIX0017598

Hypothetical protein.

Cassette

Internal acceptor

Internal donor

Mutually exclusive

Alternative first exon

Mouse
Rat
chr21
HIX0017605
C21orf49
Conserved hypothetical protein.

Cassette

Internal donor

Chimpanzee
chrX
HIX0017678
SSX2B
Synovial sarcoma, X breakpoint 2 isoform a.

Cassette

Protein motif
GO
Mouse
Rat
Chimpanzee
Macaque
Dog
chr14
HIX0017897
NCRNA00221
Hypothetical protein.

Cassette

Alternative last exon

Mouse
Rat
Dog
chr15
HIX0017955
OR4N4
Olfactory receptor, family 4, subfamily N, member 4.

Cassette

Retained intron

Alternative first exon

Alternative last exon

Chimpanzee
chr19
HIX0018194

Conserved hypothetical protein.

Cassette

Alternative last exon

Rat
Dog
chr16
HIX0018209
PRDM7
PR domain containing 7 isoform 2.

Cassette

Mutually exclusive

Retained intron

Protein motif
GO
Subcellular localization signal
Mouse
chr2
HIX0018259

Hypothetical protein.

Internal donor

Chimpanzee
Macaque
chr4
HIX0018270
C4orf42
Conserved hypothetical protein.

Retained intron

Alternative first exon

Alternative last exon

Dog
chr7_195_random
HIX0018318

Conserved hypothetical protein.

Cassette

Internal acceptor

Internal donor

Alternative first exon

Alternative last exon

Subcellular localization signal
Mouse
Rat
Macaque
Dog
chr8
HIX0018459

Conserved hypothetical protein.

Retained intron

Mouse
chr3
HIX0018602
TPRXL
Pseudogene candidate (Similar to Epa4p.).

Cassette

Internal acceptor

Retained intron

Alternative first exon

Rat
Dog
chr19
HIX0018692
ZNF714
Similar to Zinc-finger protein (Fragment).

Internal acceptor

Rat
Dog
chr13
HIX0018754

Conserved hypothetical protein.

Retained intron

Mouse
Rat
Macaque
Dog
chr19
HIX0018921
ZNF557
Similar to cDNA sequence BC003267 (16 days neonate thymus cDNA, RIKEN full-length enriched library, clone:A130029A06 product:hypothetical Zn-finger, C2H2 type/KRAB box containing protein, full insert sequence) (Adult female vagina cDNA, RIKEN full-length enriched library, clone:9930110D14 product:hypothetical Zinc finger, C2H2 type containing protein, full insert sequence).

Internal acceptor

Internal donor

Mouse
chr20
HIX0019165

Pseudogene candidate (Similar to Gonadotropin inducible transcription repressor 1.).

Cassette

Internal acceptor

Alternative first exon

Mouse
Rat
Macaque
Dog
chr12
HIX0019451

Hypothetical short protein.

Internal acceptor

Alternative first exon

Mouse
Rat
chr7
HIX0019463
AZGP1
Alpha-2-glycoprotein 1, zinc.

Retained intron

Rat
Dog
chr3
HIX0019496

Hypothetical protein.

Internal acceptor

Internal donor

Alternative first exon

Alternative last exon

Rat
chr19
HIX0019556
ZNF578
Similar to Uncharacterized protein ENSP00000380293 (Fragment).

Cassette

Internal acceptor

Alternative first exon

Mouse
Rat
chr10
HIX0019571

Similar to HERV-K_1q23.3 provirus ancestral Env polyprotein (Envelope polyprotein) (HERV-K18 envelope protein) (HERV-K110 envelope protein) (IDDMK1,2 22 envelope protein) (HERV-K(C1a) envelope protein) (HERV- K18 superantigen) (IDDMK1,2 22 superantigen) [Contains: Surface protein (SU); Transmembrane protein (TM)].

Cassette

Mouse
Rat
chr4
HIX0019629

Hypothetical short protein.

Cassette

Mutually exclusive

Alternative first exon

Chimpanzee
Macaque
chr16
HIX0019645

Conserved hypothetical protein.

Retained intron

Rat
chr6_ssto_hap7
HIX0019690
HLA-DRB1
Similar to HLA class II DR-beta (HLA-DR B) precursor.

Cassette

Alternative last exon

Protein motif
GO
Subcellular localization signal
Mouse
Rat
Chimpanzee
Dog
chr21
HIX0019875
C21orf82
Conserved hypothetical protein.

Alternative last exon

Chimpanzee
chr16
HIX0019887

Similar to Magnesium chelatase subunit H (Fragment).

Alternative first exon

Mouse
Chimpanzee
Dog
chr18
HIX0019898

Hypothetical protein.

Retained intron

Chimpanzee
chr10
HIX0019919

Hypothetical protein.

Cassette

Internal acceptor

Mutually exclusive

Alternative first exon

Alternative last exon

Dog
chr19
HIX0020144

Hypothetical short protein.

Cassette

Alternative first exon

Mouse
Rat
Dog
chr17
HIX0020418
CCL3L3
Chemokine (C-C motif) ligand 3-like 1 precursor.

Cassette

Internal donor

Alternative last exon

Protein motif
Transmembrane domain
Mouse
Rat
Chimpanzee
Macaque
Dog
chrX
HIX0020425
XAGE1E
X antigen family, member 1D isoform 1a.

Internal donor

Subcellular localization signal
Mouse
Rat
Chimpanzee
Macaque
Dog
chr12
HIX0020749

Hypothetical short protein.

Cassette

Alternative last exon

Mouse
Rat
chr9
HIX0020902

Similar to Double homeobox protein 4 (Double homeobox protein 10) (Double homeobox protein 4/10).

Internal donor

Mouse
Rat
Chimpanzee
Dog
chr19
HIX0020963

Conserved hypothetical protein.

Internal donor

Retained intron

Subcellular localization signal
Mouse
Dog
chrX
HIX0021034

Similar to Protein kinase, X-linked.

Cassette

Internal donor

Alternative first exon

Alternative last exon

Mouse
Rat
chr1
HIX0021285

Conserved hypothetical protein.

Internal acceptor

Mouse
Rat
chr1
HIX0021290
HHLA3
HERV-H LTR-associating 3 isoform 1.

Internal donor

Dog
chr6
HIX0021297

Pseudogene candidate (Similar to Potential laminin-binding protein (Fragment).).

Alternative last exon

Mouse
Rat
chr8
HIX0021421
C8orf31
Pseudogene candidate (Similar to Ly6-C antigen (Fragment).).

Cassette

Internal acceptor

Dog
chr3
HIX0021466

Conserved hypothetical protein.

Cassette

Internal acceptor

Internal donor

Mutually exclusive

Retained intron

Alternative first exon

Mouse
Rat
Macaque
Dog
chr7
HIX0021471
ZNF273
Zinc finger, C2H2-type domain containing protein.

Cassette

Internal acceptor

Internal donor

Alternative first exon

Alternative last exon

Protein motif
GO
Subcellular localization signal
Rat
chr17
HIX0021549
C17orf51
Conserved hypothetical protein.

Internal acceptor

Retained intron

Alternative first exon

Subcellular localization signal
Mouse
Rat
chr9
HIX0021844

Conserved hypothetical protein.

Cassette

Retained intron

Alternative last exon

Mouse
Dog
chr13
HIX0021880
OR7E156P
Similar to Olfactory-like receptor PJCG2 (Fragment).

Internal acceptor

Retained intron

Mouse
Rat
Dog
chr6_cox_hap2
HIX0021944
HLA-F
RecName: Full=HLA class I histocompatibility antigen, alpha chain F; AltName: Full=HLA F antigen; AltName: Full=Leukocyte antigen F; AltName: Full=CDA12; Flags: Precursor;

Internal acceptor

Retained intron

Protein motif
Transmembrane domain
Mouse
Rat
Chimpanzee
chr9
HIX0022072
ANKRD19
Similar to Elongation factor 1-delta (EF-1-delta) (Antigen NY-CO-4).

Cassette

Retained intron

Alternative last exon

Mouse
Dog
chr20
HIX0022082

Conserved hypothetical protein.

Cassette

Internal acceptor

Alternative first exon

Mouse
Rat
Macaque
Dog
chr3
HIX0022210

Conserved hypothetical protein.

Alternative first exon

Dog
chr14
HIX0022216

Hypothetical short protein.

Retained intron

Rat
chr6
HIX0022232
PRRT1
NG5 protein.

Retained intron

Subcellular localization signal
Mouse
Rat
Chimpanzee
Macaque
Dog
chr19
HIX0022579

Hypothetical protein.

Cassette

Internal acceptor

Mouse
Rat
Dog
chr20
HIX0022933
FAM182B
Conserved hypothetical protein.

Cassette

Alternative first exon

Mouse
Rat
Macaque
Dog
chr3
HIX0022963

Conserved hypothetical protein.

Retained intron

Dog
chr4
HIX0023021
GYPE
Glycophorin-E precursor.

Cassette

Mutually exclusive

Alternative last exon

Mouse
Macaque
chr17
HIX0023130
GPR172B
Porcine endogenous retrovirus A receptor 2 precursor (PERV-A receptor 2) (Protein GPR172B).

Cassette

Internal acceptor

Internal donor

Retained intron

Alternative first exon

Protein motif
Transmembrane domain
Mouse
Rat
Dog
chr1_191_random
HIX0023170
PNRC2
Proline-rich nuclear receptor coactivator 2.

Internal acceptor

Internal donor

Subcellular localization signal
Mouse
Macaque
chr2
HIX0023184
C2orf14
Pseudogene candidate (Similar to Fatty acyl-CoA reductase 2 (EC 1.2.1.-) (Male sterility domain- containing protein 1).).

Internal acceptor

Retained intron

Mouse
Rat
Dog
chr9
HIX0023222
FAM27A
Conserved hypothetical protein.

Internal acceptor

Mouse
Rat
Chimpanzee
Macaque
Dog
chr12
HIX0023235
EP400NL
Pseudogene candidate (Similar to EP400 N-terminal-like protein.).

Cassette

Internal acceptor

Internal donor

Mutually exclusive

Retained intron

Alternative first exon

Alternative last exon

Dog
chr15
HIX0023244
GOLGA6L5
Similar to Uncharacterized protein ENSP00000332482 (Fragment).

Retained intron

Rat
Dog
chr15
HIX0023246
GOLGA8G
RecName: Full=Golgin subfamily A member 8G;

Cassette

Internal acceptor

Internal donor

Retained intron

Subcellular localization signal
Mouse
Rat
Macaque
Dog
chr17
HIX0023281
CCL3L3
Chemokine (C-C motif) ligand 3-like 1 precursor.

Retained intron

Mouse
Rat
Macaque
Dog
chrX
HIX0023487
PNMA3
Similar to Paraneoplastic antigen Ma3.

3'-end AS

Dog
chr2
HIX0023492
WASH2P
WAS protein family homolog 2 (Protein FAM39B) (CXYorf1-like protein on chromosome 2).

Cassette

Internal acceptor

Internal donor

Retained intron

Alternative first exon

Chimpanzee
Macaque
Dog
chr1
HIX0023583
MST1
Similar to Hepatocyte growth factor-like protein homolog.

Internal acceptor

Internal donor

Retained intron

Mouse
Rat
Chimpanzee
Macaque
Dog
chr1
HIX0023585
PRAMEF2
Similar to PRAME family member 2.

Alternative first exon

Mouse
Rat
Chimpanzee
Dog
chr2
HIX0023950

Hypothetical protein.

Internal acceptor

Internal donor

Retained intron

Rat
chr2
HIX0023961

Hypothetical protein.

Retained intron

Rat
chr3
HIX0024381
SDHAP2
Fumarate reductase/succinate dehydrogenase flavoprotein, C-terminal domain containing protein.

Cassette

Mouse
Rat
chr3
HIX0024444

Conserved hypothetical protein.

Internal acceptor

Internal donor

Mouse
Macaque
chr4
HIX0024580
FAM200B
Hypothetical short protein.

Retained intron

Alternative first exon

Subcellular localization signal
Rat
chr4
HIX0024600
NPY1R
Neuropeptide Y receptor type 1 (NPY1-R).

Internal acceptor

Internal donor

Retained intron

Protein motif
GO
Subcellular localization signal
Chimpanzee
chr5
HIX0024801
PCDHB12
Protocadherin beta-12 precursor (PCDH-beta-12).

Internal donor

Mouse
Chimpanzee
Dog
chr5
HIX0024818

Hypothetical protein.

5'-end AS

Mouse
Rat
chr5
HIX0024822

Conserved hypothetical protein.

Internal acceptor

Internal donor

Transmembrane domain
Mouse
Rat
Dog
chr5
HIX0024862

Hypothetical protein.

Retained intron

Rat
Dog
chr6
HIX0025009
ULBP2
NKG2D ligand 2 precursor (UL16-binding protein 2) (NKG2DL2) (N2DL-2) (ALCAN-alpha) (Retinoic acid early transcript 1H).

3'-end AS

Rat
chr6
HIX0025074
NCRNA00240
Hypothetical short protein.

Alternative last exon

Mouse
Macaque
Dog
chr6_cox_hap2
HIX0025082
MOG
Myelin-oligodendrocyte glycoprotein precursor.

Cassette

Internal acceptor

Mutually exclusive

Retained intron

Alternative first exon

Alternative last exon

Protein motif
Subcellular localization signal
Transmembrane domain
Mouse
Rat
Chimpanzee
Macaque
Dog
chr6
HIX0025106

HERV-FRD_6p24.1 provirus ancestral Env polyprotein precursor (Envelope polyprotein) (HERV-FRD) (Syncytin-2) [Contains: Surface protein (SU); Transmembrane protein (TM)].

Internal acceptor

Retained intron

Mouse
Rat
Dog
chr6
HIX0025214
PFDN6
HLA class II region expressed gene KE2.

Alternative last exon

Protein motif
Mouse
Rat
Chimpanzee
Macaque
Dog
chr7
HIX0025271
ZNF117
Zinc finger, C2H2-type domain containing protein.

Alternative last exon

Mouse
Rat
Dog
chr7
HIX0025516

Similar to Kinase suppressor of Ras 1.

Cassette

Alternative first exon

Alternative last exon

Mouse
Rat
chr8
HIX0025602
FAM93B
Conserved hypothetical protein.

Cassette

Internal acceptor

Internal donor

Alternative first exon

Alternative last exon

Subcellular localization signal
Mouse
Macaque
chr8
HIX0025620
RPL23AP53
Pseudogene candidate (Conserved hypothetical protein.).

Cassette

Retained intron

Mouse
Rat
Dog
chr9
HIX0025719

ENV polyprotein (coat polyprotein) family protein.

Cassette

Retained intron

Protein motif
GO
Subcellular localization signal
Mouse
Rat
Dog
chr9
HIX0025728

Conserved hypothetical protein.

Retained intron

Chimpanzee
Macaque
Dog
chr9
HIX0025803
FAM74A4
Conserved hypothetical protein.

Cassette

Mouse
Rat
Chimpanzee
Macaque
chr10
HIX0026039

Conserved hypothetical protein.

Internal acceptor

Internal donor

Mouse
Rat
Macaque
Dog
chr11
HIX0026170

Similar to Mitochondrial carrier triple repeat protein 1.

5'-end AS

3'-end AS

Mouse
Rat
Chimpanzee
Dog
chr13
HIX0026556

Conserved hypothetical protein.

Cassette

Internal donor

Alternative first exon

Mouse
Rat
chr13
HIX0026557

Similar to Ankyrin repeat domain-containing protein 18A.

Alternative last exon

Macaque
chr16
HIX0026966

Conserved hypothetical protein.

Cassette

Internal donor

Retained intron

Mouse
Rat
Chimpanzee
Macaque
chr18
HIX0027391

Hypothetical protein.

Internal acceptor

Alternative first exon

Rat
Chimpanzee
Macaque
chr19
HIX0027483

Conserved hypothetical protein.

Alternative last exon

Subcellular localization signal
Mouse
Rat
chr19
HIX0027486
ZNF826
Zinc finger, C2H2-type domain containing protein.

Cassette

Mutually exclusive

Alternative last exon

Rat
Dog
chr19
HIX0027536

Pseudogene candidate (Similar to Eosinophil lysophospholipase (EC 3.1.1.5) (Charcot-Leyden crystal protein homolog) (Lysolecithin acylhydrolase) (CLC) (Galectin-10) (Fragment).).

Retained intron

Mouse
Rat
Chimpanzee
Macaque
Dog
chr21
HIX0027790

RNA-directed DNA polymerase (reverse transcriptase), related domain containing protein.

Cassette

Alternative last exon

Rat
chr6
HIX0027959
HLA-DQA1
HLA class II histocompatibility antigen, DQ(5) alpha chain precursor (DC-1 alpha chain).

Cassette

Retained intron

Protein motif
Subcellular localization signal
Chimpanzee
Macaque
Dog
chrUn_211
HIX0028038

Pseudogene candidate (Similar to Asparagine synthetase [glutamine-hydrolyzing] (EC 6.3.5.4) (Glutamine- dependent asparagine synthetase) (Cell cycle control protein TS11).).

Cassette

Alternative first exon

Mouse
Rat
Macaque
chr1
HIX0028323
FAM72B
Conserved hypothetical protein.

Internal donor

Subcellular localization signal
Chimpanzee
Macaque
Dog
chr1
HIX0028547
MSTO2P
Similar to Protein misato homolog 1.

Retained intron

Mouse
Rat
Dog
chr1
HIX0028707

Similar to Poly [ADP-ribose] polymerase 8 (EC 2.4.2.30) (PARP-8).

Cassette

Internal acceptor

Retained intron

Alternative last exon

Mouse
Rat
chr1
HIX0028891
DDX11L4
Conserved hypothetical protein.

Internal acceptor

Internal donor

Subcellular localization signal
Mouse
Rat
Chimpanzee
Macaque
Dog
chr1
HIX0029469

Similar to Myomegalin (Phosphodiesterase 4D-interacting protein).

3'-end AS

Mouse
Rat
Chimpanzee
Macaque
chr1
HIX0029718
PRAMEF7
Similar to PRAME family member 10.

5'-end AS

Mouse
Rat
Macaque
Dog
chr2
HIX0029777
AQP12B
Aquaporin-12A (AQP-12).

Cassette

Internal acceptor

Internal donor

Rat
Macaque
Dog
chr2
HIX0029795
C2orf27A
Similar to Protein neurobeachin (Lysosomal-trafficking regulator 2) (Protein BCL8B).

Alternative first exon

Subcellular localization signal
Transmembrane domain
Mouse
Rat
Macaque
Dog
chr2
HIX0029873

Similar to Zinc finger and BTB domain containing 45.

Cassette

Alternative first exon

Mouse
Rat
Chimpanzee
Dog
chr3
HIX0030819

Pseudogene candidate (Similar to Nucleophosmin 1 isoform 3.).

Internal donor

Rat
chr3
HIX0030838

Pseudogene candidate (Similar to Succinate dehydrogenase complex subunit A (Fragment).).

Cassette

Internal acceptor

Alternative last exon

Dog
chr4
HIX0031374
UGT2B28
Similar to UDP-glucuronosyltransferase 2B28 precursor (EC 2.4.1.17) (UDPGT).

Cassette

Retained intron

Protein motif
Subcellular localization signal
Mouse
Rat
Chimpanzee
Macaque
Dog
chr4
HIX0031411
C4orf11
Hypothetical protein.

Internal acceptor

Rat
Dog
chr4
HIX0031464

Conserved hypothetical protein.

Internal donor

Retained intron

Subcellular localization signal
Mouse
Rat
chr4
HIX0031749

Conserved hypothetical protein.

Retained intron

Mouse
Chimpanzee
chr5
HIX0032021
PMCHL1
Pro-melanin-concentrating hormone-like 1 protein.

Cassette

Internal acceptor

Mouse
Chimpanzee
Dog
chr5
HIX0032028

Hypothetical short protein.

Alternative last exon

Mouse
Rat
chr5
HIX0032052

Hypothetical protein.

3'-end AS

Rat
chr5
HIX0032663
SERF1B
Small EDRK-rich factor 1B, centromeric.

Retained intron

Alternative last exon

Protein motif
Subcellular localization signal
Mouse
Rat
Chimpanzee
Macaque
Dog
chr6
HIX0032766
BAT2
Similar to SubName: Full=HLA-B associated transcript 2; Flags: Fragment;

Internal acceptor

Internal donor

Retained intron

Subcellular localization signal
Chimpanzee
Macaque
Dog
chr6_mann_hap4
HIX0032789
RNF39
Ring finger protein 39 isoform 2.

Cassette

Internal acceptor

Internal donor

Retained intron

Protein motif
Mouse
Rat
Macaque
Dog
chr6
HIX0032825

Conserved hypothetical protein.

Internal acceptor

Mouse
Rat
Chimpanzee
Dog
chr6
HIX0032828
OR5V1
Olfactory receptor, family 11, subfamily A, member 1.

Alternative first exon

Mouse
Rat
Chimpanzee
Macaque
Dog
chr6
HIX0032866
GGNBP1
Gametogenetin-binding protein 1.

Internal acceptor

Macaque
chr6
HIX0032888

Similar to 60S ribosomal protein L21.

Cassette

Rat
chr6
HIX0033244

Hypothetical short protein.

Internal acceptor

Mouse
Rat
Dog
chr6_cox_hap2
HIX0033491
HLA-DRA
Major histocompatibility complex, class II, DR alpha precursor.

Cassette

Internal acceptor

Internal donor

Alternative last exon

Protein motif
Subcellular localization signal
Transmembrane domain
Chimpanzee
Macaque
chr7
HIX0033510
PMS2L1
Similar to Postmeiotic segregation increased 2-like protein 1 (Postmeiotic segregation increased 2-like protein 6) (Postmeiotic segregation increased 2-like protein 13) (Postmeiotic segregation increased protein 3) (hPMS3) (Postmeiotic segregation increased protein 8).

Cassette

Internal acceptor

Internal donor

Alternative last exon

Mouse
Rat
chr7
HIX0033529
ERVWE1
TLV/ENV coat polyprotein family protein.

Cassette

Internal acceptor

Retained intron

Protein motif
GO
Subcellular localization signal
Mouse
Rat
Macaque
Dog
chr7
HIX0033539

Hypothetical short protein.

Internal acceptor

Mouse
chr7
HIX0033583

Conserved hypothetical protein.

Internal acceptor

Internal donor

Mouse
Rat
Macaque
Dog
chr7
HIX0033630
PMS2L4
Pseudogene candidate (Similar to Postmeiotic segregation increased 2-like protein 4 (Fragment).).

Cassette

Internal acceptor

Alternative last exon

Mouse
Rat
chr8
HIX0034315

Hypothetical short protein.

Cassette

Internal acceptor

Retained intron

Mouse
Rat
Macaque
chr8
HIX0034332

Hypothetical protein.

Internal acceptor

Internal donor

Mouse
Rat
chr9
HIX0034813

Hypothetical short protein.

Internal donor

Subcellular localization signal
Rat
Dog
chr9
HIX0034848

Pseudogene candidate (Similar to Cyclin-dependent kinase 2-associated protein 2 (CDK2-associated protein 2) (DOC-1-related protein) (DOC-1R).).

Retained intron

Alternative first exon

Mouse
Rat
Macaque
Dog
chr9
HIX0034866
FAM27C
Conserved hypothetical protein.

Internal acceptor

Mouse
Rat
Chimpanzee
Macaque
Dog
chr9
HIX0034873
TUBBP5
Similar to Tubulin beta-8 chain.

Internal donor

Alternative first exon

Protein motif
GO
Subcellular localization signal
Mouse
Rat
Macaque
Dog
chr9
HIX0035014
FAM27C
Conserved hypothetical protein.

Internal acceptor

Mouse
Rat
Macaque
Dog
chr9
HIX0035192
NCRNA00256B
Conserved hypothetical protein.

Retained intron

Mouse
Rat
chr10
HIX0035374
BMS1P4
Pseudogene candidate (Similar to Ribosome biogenesis protein BMS1 homolog (Ribosome assembly protein BMS1 homolog).).

Internal donor

Alternative last exon

Rat
Dog
chr10
HIX0035394
C10orf40
Conserved hypothetical protein.

Retained intron

Mouse
Rat
chr10
HIX0035660

Conserved hypothetical protein.

5'-end AS

Macaque
Dog
chr11
HIX0035854
ZNF214
Similar to Zinc finger and SCAN domain-containing protein 2 (Zinc finger protein 29) (Zfp-29).

Cassette

Rat
chr11
HIX0035984

Similar to Elastin precursor (Tropoelastin).

Alternative last exon

Mouse
Rat
Chimpanzee
Macaque
Dog
chr12
HIX0036754
OR7E140P
Similar to Ectonucleotide pyrophosphatase/phosphodiesterase family member 7 precursor (EC 3.1.4.12) (E-NPP7) (NPP-7) (Alkaline sphingomyelin phosphodiesterase) (Intestinal alkaline sphingomyelinase) (Alk-SMase).

Cassette

Retained intron

Alternative last exon

Mouse
Rat
Macaque
Dog
chrUn_213
HIX0038118
POTED
ANKRD26-like family B member 3 (Ankyrin repeat domain-containing protein 21) (Protein POTE) (Prostate, ovary, testis-expressed protein).

Cassette

Alternative last exon

Mouse
Rat
Chimpanzee
Dog
chr15
HIX0038310
HERC2P7
Similar to RNA polymerase II elongation factor ELL (Eleven-nineteen lysine-rich leukemia protein).

3'-end AS

Mouse
Rat
Macaque
Dog
chr15
HIX0038434

Similar to Golgin subfamily A member 6A (Golgin linked to PML) (Golgin-like protein).

Retained intron

Subcellular localization signal
Chimpanzee
Macaque
Dog
chr16
HIX0038520
TP53TG3B
Similar to TP53-target gene 3 protein (TP53-inducible gene 3 protein).

Alternative last exon

Mouse
Rat
Macaque
Dog
chr16
HIX0038546
PKD1P1
Nuclear pore complex interacting family protein.

Cassette

Internal donor

Retained intron

Alternative first exon

Protein motif
Subcellular localization signal
Mouse
Rat
Macaque
Dog
chr16
HIX0038584
FOXF1
Forkhead box protein F1 (Forkhead-related protein FKHL5) (Forkhead- related transcription factor 1) (FREAC-1) (Forkhead-related activator 1).

Internal acceptor

Internal donor

Rat
chr16
HIX0038613

Pseudogene candidate (Similar to Angiogenic factor with G patch and FHA domains 1 (Angiogenic factor VG5Q) (Vasculogenesis gene on 5q protein) (hVG5Q) (G patch domain- containing protein 7).).

Cassette

Internal acceptor

Internal donor

Alternative last exon

Mouse
Rat
Dog
chr16
HIX0038636

Protein of unknown function DUF2152 region containing protein.

Internal acceptor

Internal donor

Macaque
chr16
HIX0038748
TP53TG3B
RecName: Full=TP53-target gene 3 protein; AltName: Full=TP53-inducible gene 3 protein;

Internal acceptor

Internal donor

Alternative last exon

Mouse
Rat
Macaque
Dog
chr17
HIX0039044
CCL7
Monocyte chemotactic protein-3 (Chemokine (C-C motif) ligand 7).

Cassette

Protein motif
GO
Chimpanzee
chr17
HIX0039146

Hypothetical protein.

Retained intron

Mouse
Rat
chr17
HIX0039191

Pseudogene candidate (Conserved hypothetical protein.).

Alternative last exon

Mouse
Rat
Dog
chr17
HIX0039195
TBC1D3P2
Similar to TBC1 domain family member 3 (Rab GTPase-activating protein PRC17) (Prostate cancer gene 17 protein) (TRE17 alpha protein).

Internal donor

Protein motif
Subcellular localization signal
Mouse
Rat
Macaque
chr19
HIX0039956

Hypothetical protein.

Internal acceptor

Mouse
Rat
chr19
HIX0039978
CYP2A6
Cytochrome P450 2A6 (EC 1.14.14.1) (CYPIIA6) (Coumarin 7-hydroxylase) (P450 IIA3) (CYP2A3) (P450(I)).

Cassette

Protein motif
GO
Subcellular localization signal
Rat
Chimpanzee
Macaque
Dog
chr19
HIX0039987
CD79A
B-cell antigen receptor complex-associated protein alpha-chain precursor (Ig-alpha) (MB-1 membrane glycoprotein) (Surface IgM- associated protein) (Membrane-bound immunoglobulin-associated protein) (CD79a antigen).

Internal donor

Protein motif
Chimpanzee
Macaque
chr19
HIX0040084

Hypothetical short protein.

Cassette

Alternative last exon

Mouse
Rat
Dog
chr19
HIX0040112
ZNF823
Similar to DNA-binding protein.

Cassette

Mutually exclusive

Dog
chr20
HIX0040580

Hypothetical short protein.

Cassette

Internal acceptor

Alternative first exon

Mouse
Rat
Macaque
Dog
chr20
HIX0040591
FRG1B
Pseudogene candidate (Similar to Protein FRG1 (FSHD region gene 1 protein).).

Cassette

Internal donor

Rat
Dog
chr20
HIX0040676

Hypothetical short protein.

Alternative first exon

Alternative last exon

Dog
chr21
HIX0040872

Hypothetical short protein.

Cassette

Internal donor

Mutually exclusive

Retained intron

Mouse
Rat
chr21
HIX0040878
C21orf90
Conserved hypothetical protein.

Cassette

Mouse
Rat
Chimpanzee
Dog
chr21
HIX0040881
ANKRD30BP2
Pseudogene candidate (Conserved hypothetical protein.).

Cassette

Internal acceptor

Mouse
Rat
chr21
HIX0040902
NCRNA00161
Conserved hypothetical protein.

Internal donor

Dog
chr21
HIX0040905
POTED
Protein expressed in prostate, ovary, testis, and placenta 15.

Cassette

Alternative last exon

Chimpanzee
Macaque
chr21
HIX0040910
C21orf105
ENV polyprotein (coat polyprotein) family protein.

Retained intron

Protein motif
GO
Subcellular localization signal
Mouse
Rat
Macaque
Dog
chr21
HIX0041076

Conserved hypothetical protein.

Internal acceptor

Chimpanzee
chr22
HIX0041135
DUXAP10
Pseudogene candidate (Similar to Double homeobox protein A.).

Cassette

Internal donor

Alternative last exon

Rat
Macaque
chr22
HIX0041164
KCNJ4
Inward rectifier potassium channel 4 (Potassium channel, inwardly rectifying subfamily J member 4) (Inward rectifier K(+) channel Kir2.3) (Hippocampal inward rectifier) (HIR) (HRK1) (HIRK2).

Alternative first exon

Macaque
chr22
HIX0041180
GGTLC2
Similar to Gamma-glutamyltransferase-like protein 4.

Retained intron

Protein motif
Mouse
Rat
Macaque
Dog
chr22
HIX0041389
NCRNA00207
Conserved hypothetical protein.

Cassette

Internal donor

Mouse
Rat
chr22
HIX0041403
POTEH
ANKRD26-like family C member 2 (Prostate, ovary, testis-expressed protein on chromosome 14) (POTE-14).

Cassette

Internal donor

Retained intron

Rat
Macaque
chr22
HIX0041406
POM121L8P
Similar to SubName: Full=Breakpoint cluster region protein; Flags: Fragment;

Cassette

Internal donor

Alternative first exon

Alternative last exon

Mouse
Rat
Chimpanzee
Dog
chrX
HIX0056177
FAM9A
Protein FAM9A.

Internal donor

Rat
Chimpanzee
Dog
chrX
HIX0056181
NXF5
Similar to Nuclear RNA export factor 5 (TAP-like protein 1) (TAPL-1).

Cassette

Internal acceptor

Internal donor

Protein motif
GO
Subcellular localization signal
Mouse
Rat
Dog
chrY
HIX0056660
PRY2
PTPN13-like protein, Y-linked (Testis-specific PTP-BL-related Y protein).

Cassette

Mouse
Rat
Macaque
Dog
chrY
HIX0056668
TTTY7
Conserved hypothetical protein.

Cassette

Mouse
Rat
Macaque
Dog
chrY
HIX0056694
TSPY3
Testis-specific Y-encoded protein 1 (Cancer/testis antigen 78) (CT78).

Internal acceptor

Retained intron

Protein motif
Subcellular localization signal
Mouse
Rat
Macaque
Dog
chr1
HIX0056857

Conserved hypothetical protein.

Internal donor

Mouse
Rat
Macaque
Dog
chr6
HIX0057733
ZNRD1
Zinc ribbon domain containing 1.

Retained intron

Mouse
Chimpanzee
Macaque
Dog
chr6_dbb_hap3
HIX0057751
HSPA1B
Heat shock 70 kDa protein 1 (HSP70.1) (HSP70-1/HSP70-2).

Internal acceptor

Internal donor

Retained intron

Protein motif
Mouse
Rat
Chimpanzee
Macaque
Dog
chr6_cox_hap2
HIX0057935
TUBB
Tubulin beta chain (Tubulin beta-5 chain).

Cassette

Internal acceptor

Internal donor

Alternative first exon

Protein motif
Subcellular localization signal
Mouse
Rat
Chimpanzee
Macaque
chr6_mcf_hap5
HIX0057971

RecName: Full=MHC class I polypeptide-related sequence B; Short=MIC-B; Flags: Precursor;

Internal acceptor

Protein motif
Subcellular localization signal
Mouse
Rat
Chimpanzee
Macaque
Dog
chr6_mcf_hap5
HIX0057977
PSORS1C1
SEEK1 protein.

Cassette

Internal acceptor

Alternative first exon

Subcellular localization signal
Mouse
Rat
Chimpanzee
Macaque
Dog
chr6_mann_hap4
HIX0057992
HLA-DMB
Similar to HLA class II histocompatibility antigen, DM beta chain precursor (MHC class II antigen DMB).

Cassette

Internal acceptor

Internal donor

Retained intron

Alternative last exon

Protein motif
Rat
Chimpanzee
Macaque
Dog
chr6_mann_hap4
HIX0058007
MICA
Similar to MICA protein (Fragment).

Alternative first exon

Protein motif
GO
Subcellular localization signal
Mouse
Rat
Chimpanzee
Macaque
Dog
chr6_qbl_hap6
HIX0058104
TUBB
Tubulin, beta.

Cassette

Internal acceptor

Internal donor

Retained intron

Alternative first exon

Protein motif
Subcellular localization signal
Rat
Chimpanzee
Macaque
Dog
chr6_qbl_hap6
HIX0058119
DHX16
Similar to DEAH (Asp-Glu-Ala-His) box polypeptide 16.

Internal donor

Alternative first exon

Protein motif
Subcellular localization signal
Mouse
Rat
Chimpanzee
Macaque
Dog
chr6_qbl_hap6
HIX0058180
HLA-DOA
Major histocompatibility complex, class II, DO alpha precursor.

Internal acceptor

Protein motif
GO
Mouse
Rat
Chimpanzee
Macaque
Dog
chr6_qbl_hap6
HIX0058187
HSPA1B
Similar to Heat shock 70kDa protein 1B.

Internal acceptor

Internal donor

Retained intron

Protein motif
Mouse
Rat
Chimpanzee
Macaque
Dog
chr6_qbl_hap6
HIX0058199
MUC21
Similar to Mucin 21.

Retained intron

Chimpanzee
Macaque
Dog
chr7
HIX0058295
PRSS1
Trypsin-1 precursor (EC 3.4.21.4) (Trypsin I) (Cationic trypsinogen) (Serine protease 1) (Beta-trypsin) [Contains: Alpha-trypsin chain 1; Alpha-trypsin chain 2].

Internal acceptor

Alternative last exon

Protein motif
Mouse
Rat
Dog
chr8
HIX0058451
FAM86B2
Similar to RecName: Full=Protein FAM86A;

Cassette

Internal donor

Subcellular localization signal
Mouse
Rat
Chimpanzee
Macaque
Dog
chr10
HIX0058798
AGAP9
Similar to Centaurin, gamma 2 isoform 2.

Retained intron

Protein motif
Subcellular localization signal
Mouse
Rat
Chimpanzee
Macaque
Dog
chr16
HIX0059557
TP53TG3B
RecName: Full=TP53-target gene 3 protein; AltName: Full=TP53-inducible gene 3 protein;

Cassette

Internal acceptor

Internal donor

Retained intron

Mouse
Rat
Chimpanzee
Macaque
Dog
chr19
HIX0059834
ZNF836
Conserved hypothetical protein.

Internal donor

Rat
Dog
chr19
HIX0059836
CGB1
Similar to Chorionic gonadotropin, beta polypeptide 1.

Internal donor

Mouse
Rat
Chimpanzee
Macaque
Dog
chrX
HIX0077163
PAGE3
P antigen family, member 3 (prostate associated).

Internal acceptor

Mouse
chrY
HIX0077336
RBMY2FP
RNA binding motif protein, Y-linked, family 1, member F.

Cassette

Alternative first exon

Alternative last exon

Rat
Chimpanzee
Macaque
Dog
chrY
HIX0077370
RBMY1B
RNA binding motif protein, Y-linked, family 1, member A1.

Cassette

Mutually exclusive

Alternative first exon

Alternative last exon

Protein motif
GO
Subcellular localization signal
Mouse
Rat
Macaque
Dog
chr6
HIX0078236
HLA-DRA
Major histocompatibility complex, class II, DR alpha precursor.

Internal acceptor

Protein motif
Mouse
Rat
Chimpanzee
Macaque
Dog
chr6_mann_hap4
HIX0078594
HLA-C
HLA class I histocompatibility antigen, Cw-16 alpha chain precursor (MHC class I antigen Cw*16).

Internal acceptor

Mouse
Rat
Chimpanzee
Macaque
Dog
chr7
HIX0078769
ERVWE1
Hypothetical short protein.

Alternative first exon

Mouse
Rat
Macaque
Dog
chr19
HIX0080021

Hypothetical protein.

Internal acceptor

Mouse
Rat
chrX
HIX0093640

Hypothetical short protein.

Alternative last exon

Mouse
Rat
chrY
HIX0093747
DAZ4
RecName: Full=Deleted in azoospermia protein 3;

Cassette

Protein motif
GO
Subcellular localization signal
Transmembrane domain
Mouse
Rat
Macaque
Dog
chr17
HIX0094930

Hypothetical short protein.

Alternative first exon

Mouse
Rat
Chimpanzee
Macaque
Dog
chr7
HIX0095121

Hypothetical protein.

Internal donor

Alternative last exon

Mouse
Rat
Chimpanzee
Macaque
chr7
HIX0095122

Hypothetical short protein.

Cassette

Alternative first exon

Mouse
Rat
Dog
chr2
HIX0117765
RHOB
Conserved hypothetical protein.

Internal acceptor

Internal donor

Chimpanzee
chr6
HIX0121796
DDAH2
Dimethylarginine dimethylaminohydrolase 2.

Retained intron

Mouse
Rat
Chimpanzee
Macaque
Dog
chr15
HIX0132594

Similar to Golgi autoantigen, golgin subfamily a, 6B.

5'-end AS

Mouse
Rat
Chimpanzee
Macaque
Dog
chr6_cox_hap2
HIX0151763
HLA-C
Similar to Chimpanzee MHC class I ChlA chain (Fragment).

Cassette

Internal acceptor

Internal donor

Mutually exclusive

Retained intron

Protein motif
Mouse
Rat
Chimpanzee
Macaque
Dog
chr7
HIX0152306
TRIM73
Tripartite motif-containing protein 73 (Tripartite motif-containing protein 50B).

Internal acceptor

Retained intron

Alternative first exon

Protein motif
GO
Subcellular localization signal
Mouse
Rat
Macaque
Dog
chr14
HIX0155116
KIAA0125
Conserved hypothetical protein.

Internal acceptor

Internal donor

Alternative first exon

Subcellular localization signal
Mouse
Rat
Dog
chrY
HIX0159613
ASMTL
Acetylserotonin O-methyltransferase-like.

Cassette

Internal donor

Mutually exclusive

Alternative first exon

Protein motif
Subcellular localization signal
Mouse
Rat
Chimpanzee
Macaque
Dog
chrY
HIX0159614
PLCXD1
Phosphatidylinositol-specific phospholipase C, X domain containing 1.

Cassette

Internal acceptor

Internal donor

Mouse
Rat
Chimpanzee
Macaque
Dog
chrY
HIX0159621
CSF2RA
Colony stimulating factor 2 receptor alpha chain isoform a precursor.

Cassette

Internal donor

Mutually exclusive

Alternative last exon

Protein motif
Subcellular localization signal
Transmembrane domain
Mouse
Rat
Chimpanzee
Macaque
Dog
chrY
HIX0159622
SFRS17A
Acetylserotonin O-methyltransferase.

Cassette

Retained intron

Subcellular localization signal
Mouse
Rat
Chimpanzee
Macaque
Dog
chr1
HIX0159709
AMY1C
Salivary amylase alpha 1A precursor.

Alternative first exon

Mouse
Rat
Chimpanzee
Macaque
Dog
chr3
HIX0163344

Conserved hypothetical protein.

Cassette

Alternative last exon

Mouse
Rat
Macaque
Dog
chr3
HIX0163349
PPP4R2
Protein phosphatase 4, regulatory subunit 2.

Internal acceptor

Internal donor

Alternative first exon

Alternative last exon

Mouse
Rat
Chimpanzee
Dog
chr4_ctg9_hap1
HIX0164238
YTHDC1
Splicing factor YT521-B isoform 1.

Cassette

Mouse
Rat
Chimpanzee
Macaque
Dog
chr4_ctg9_hap1
HIX0164239
UGT2A3
RecName: Full=UDP-glucuronosyltransferase 2A3; Short=UDPGT 2A3; EC=2.4.1.17; Flags: Precursor;

Cassette

Mouse
Rat
Chimpanzee
Macaque
Dog
chr4_ctg9_hap1
HIX0164241
UGT2B10
UDP glucuronosyltransferase 2B10 isoform 1.

Internal donor

Protein motif
Mouse
Rat
Chimpanzee
Macaque
Dog
chr6
HIX0164695
HCG18
Conserved hypothetical protein.

Internal donor

Rat
Chimpanzee
chr6
HIX0164696
MUC21
RecName: Full=Mucin-21; Short=MUC-21; AltName: Full=Epiglycanin; Flags: Precursor;

Retained intron

Mouse
Rat
Chimpanzee
Macaque
chr6
HIX0164760
LST1
Leukocyte specific transcript 1 isoform 4.

Cassette

Internal acceptor

Internal donor

Mutually exclusive

Retained intron

Alternative first exon

Protein motif
GO
Subcellular localization signal
Transmembrane domain
Chimpanzee
Macaque
Dog
chr6
HIX0164761
ZNRD1AS
RecName: Full=Uncharacterized protein C6orf12; AltName: Full=Protein HTEX4;

Cassette

Internal donor

Alternative first exon

Alternative last exon

Subcellular localization signal
Mouse
Chimpanzee
Macaque
Dog
chr6
HIX0164788
HLA-B
Non-protein coding transcript.

Alternative first exon

Mouse
Rat
Chimpanzee
Macaque
Dog
chr6_apd_hap1
HIX0165903
PRRT1
Interferon-induced transmembrane protein family protein.

Internal acceptor

Retained intron

Subcellular localization signal
Mouse
Rat
Chimpanzee
Macaque
Dog
chr6_apd_hap1
HIX0165907
MUC21
RecName: Full=Mucin-21; Short=MUC-21; AltName: Full=Epiglycanin; Flags: Precursor;

Internal donor

Retained intron

Subcellular localization signal
Mouse
Rat
Chimpanzee
Dog
chr6_apd_hap1
HIX0165920
TUBB
Tubulin, beta.

Cassette

Internal acceptor

Internal donor

Alternative first exon

Protein motif
Subcellular localization signal
Mouse
Rat
Chimpanzee
Macaque
Dog
chr6_apd_hap1
HIX0165922
ZNF311
Similar to SubName: Full=Regulator of sex-limitation candidate 3;

Internal acceptor

Internal donor

Retained intron

Mouse
Rat
Chimpanzee
Macaque
Dog
chr6_apd_hap1
HIX0165923
SNORD48
RecName: Full=Protein G8;

Cassette

Mouse
Chimpanzee
Macaque
Dog
chr6_apd_hap1
HIX0165924
PSMB8
Proteasome beta 8 subunit isoform E1 proprotein.

Alternative first exon

Subcellular localization signal
Mouse
Rat
Chimpanzee
Macaque
Dog
chr6_apd_hap1
HIX0165925
HLA-A
RecName: Full=HLA class I histocompatibility antigen, A-1 alpha chain; AltName: Full=MHC class I antigen A*1; Flags: Precursor;

Internal acceptor

Internal donor

Retained intron

Protein motif
Subcellular localization signal
Mouse
Rat
Chimpanzee
Macaque
Dog
chr6_apd_hap1
HIX0165926
PBX2
Pre-B-cell leukemia homeobox 2.

3'-end AS

Mouse
Rat
Chimpanzee
Macaque
Dog
chr6_apd_hap1
HIX0165932
VARS
Valyl-tRNA synthetase.

Cassette

Internal donor

Protein motif
Mouse
Rat
Chimpanzee
Macaque
Dog
chr6_apd_hap1
HIX0165933
TRIM27
Ret finger protein.

Retained intron

Mouse
Rat
Chimpanzee
Macaque
Dog
chr6_apd_hap1
HIX0165935
HLA-DPB2
Similar to HLA-DPB1 precursor (MHC class II antigen) (Major histocompatibility complex, class II, DP beta 1) (HLA-DPB1 protein).

Alternative last exon

Mouse
Rat
Chimpanzee
Macaque
Dog
chr6_apd_hap1
HIX0165936
NOTCH4
G-protein signaling modulator 3 (AGS3-like, C. elegans).

Internal acceptor

Protein motif
Subcellular localization signal
Mouse
Rat
Chimpanzee
Macaque
Dog
chr6_apd_hap1
HIX0165937
AGER
Advanced glycosylation end product-specific receptor isoform 1 precursor.

Cassette

Internal acceptor

Internal donor

Retained intron

Protein motif
Subcellular localization signal
Transmembrane domain
Mouse
Rat
Chimpanzee
Macaque
Dog
chr6_apd_hap1
HIX0165938
MDC1
Similar to Mediator of DNA-damage checkpoint 1.

Cassette

Internal acceptor

Internal donor

Retained intron

Alternative first exon

Protein motif
Subcellular localization signal
Mouse
Chimpanzee
chr6_apd_hap1
HIX0165943
NCR3
Natural cytotoxicity triggering receptor 3 isoform a.

Internal acceptor

Alternative last exon

Mouse
Rat
Chimpanzee
Macaque
Dog
chr6_apd_hap1
HIX0165944
LST1
Leukocyte specific transcript 1 isoform 4.

Cassette

Internal acceptor

Internal donor

Mutually exclusive

Retained intron

Alternative first exon

Protein motif
GO
Subcellular localization signal
Transmembrane domain
Mouse
Rat
Chimpanzee
Macaque
Dog
chr6_apd_hap1
HIX0165947
ZNRD1AS
RecName: Full=Uncharacterized protein C6orf12; AltName: Full=Protein HTEX4;

Cassette

Internal donor

Alternative last exon

Subcellular localization signal
Rat
Chimpanzee
Macaque
chr6_apd_hap1
HIX0165951
TRIM10
Tripartite motif-containing 10 isoform 2.

Retained intron

Mouse
Rat
Chimpanzee
Macaque
Dog
chr6_apd_hap1
HIX0165956
LTB
Lymphotoxin-beta isoform a.

Cassette

Protein motif
GO
Mouse
Rat
Chimpanzee
Macaque
Dog
chr6_apd_hap1
HIX0165958

7TM GPCR, rhodopsin-like family protein.

Alternative first exon

Chimpanzee
Dog
chr6_apd_hap1
HIX0165959
BTNL2
Similar to Butyrophilin-like 2.

3'-end AS

Mouse
Rat
Chimpanzee
Macaque
Dog
chr6_cox_hap2
HIX0166061
KIAA1949
Phostensin.

Cassette

Internal acceptor

Internal donor

Retained intron

Mouse
Rat
Chimpanzee
Macaque
chr6_cox_hap2
HIX0166066
LY6G6E
HLA-B associated transcript 5.

Cassette

Internal acceptor

Retained intron

Alternative first exon

Alternative last exon

Protein motif
GO
Subcellular localization signal
Transmembrane domain
Mouse
Rat
Chimpanzee
Macaque
Dog
chr6_cox_hap2
HIX0166070
GNL1
Guanine nucleotide binding protein-like 1.

Cassette

Internal acceptor

Internal donor

Retained intron

Chimpanzee
Macaque
Dog
chr6_cox_hap2
HIX0166072
SLC44A4
RecName: Full=Choline transporter-like protein 4; AltName: Full=Solute carrier family 44 member 4;

Alternative first exon

Rat
Chimpanzee
Macaque
Dog
chr6_cox_hap2
HIX0166076
HCG18
Conserved hypothetical protein.

Internal donor

Mouse
Rat
Chimpanzee
Macaque
Dog
chr6_cox_hap2
HIX0166083
TAP1
Transporter 1, ATP-binding cassette, sub-family B.

Alternative first exon

Mouse
Rat
Chimpanzee
Macaque
Dog
chr6_cox_hap2
HIX0166087

Zinc finger and BTB domain containing 22.

Alternative first exon

Mouse
Rat
Chimpanzee
Macaque
Dog
chr6_cox_hap2
HIX0166088
CFB
Complement component 2 isoform 1 preproprotein.

Cassette

Internal donor

Mutually exclusive

Alternative first exon

Alternative last exon

Protein motif
GO
Subcellular localization signal
Mouse
Rat
Macaque
Dog
chr6_cox_hap2
HIX0166094
ZNF311
Similar to SubName: Full=Regulator of sex-limitation candidate 3;

Internal acceptor

Internal donor

Retained intron

Mouse
Rat
Chimpanzee
Macaque
Dog
chr6_cox_hap2
HIX0166097
SLC39A7
Solute carrier family 39, member 7.

Cassette

Internal acceptor

Internal donor

Retained intron

Alternative first exon

Protein motif
Transmembrane domain
Chimpanzee
Macaque
Dog
chr6_cox_hap2
HIX0166098
SNORD48
RecName: Full=Protein G8;

Cassette

Mouse
Rat
Chimpanzee
Macaque
chr6_cox_hap2
HIX0166100
PSMB8
Proteasome beta 8 subunit isoform E1 proprotein.

Retained intron

Alternative first exon

Protein motif
GO
Subcellular localization signal
Mouse
Rat
Chimpanzee
Macaque
Dog
chr6_cox_hap2
HIX0166103
HLA-A
RecName: Full=HLA class I histocompatibility antigen, A-1 alpha chain; AltName: Full=MHC class I antigen A*1; Flags: Precursor;

Internal acceptor

Internal donor

Retained intron

Protein motif
Subcellular localization signal
Mouse
Rat
Chimpanzee
Macaque
Dog
chr6_cox_hap2
HIX0166104
GTF2H4
General transcription factor IIH, polypeptide 4, 52kDa.

Internal donor

Rat
Chimpanzee
Macaque
Dog
chr6_cox_hap2
HIX0166110
HLA-DPA1
Major histocompatibility complex, class II, DP alpha 1 precursor.

Retained intron

Subcellular localization signal
Mouse
Rat
Macaque
Dog
chr6_cox_hap2
HIX0166111
HLA-DMB
Major histocompatibility complex, class II, DM alpha precursor.

Internal acceptor

Internal donor

Alternative last exon

Mouse
Rat
Chimpanzee
Macaque
Dog
chr6_cox_hap2
HIX0166119
RDBP
RD RNA-binding protein.

Internal acceptor

Retained intron

Alternative first exon

Mouse
Rat
Chimpanzee
Macaque
Dog
chr6_cox_hap2
HIX0166120
TNF
Tumor necrosis factor alpha.

5'-end AS

Mouse
Rat
Chimpanzee
Macaque
Dog
chr6_cox_hap2
HIX0166121
MDC1
Similar to Mediator of DNA-damage checkpoint 1.

Cassette

Internal acceptor

Internal donor

Retained intron

Alternative first exon

Protein motif
Subcellular localization signal
Mouse
Rat
Chimpanzee
Macaque
Dog
chr6_cox_hap2
HIX0166131

Similar to MHC class I polypeptide-related sequence B.

Internal acceptor

Protein motif
Subcellular localization signal
Mouse
Rat
Chimpanzee
Macaque
Dog
chr6_cox_hap2
HIX0166140
DAXX
Death-domain associated protein isoform a.

Retained intron

Mouse
Rat
Chimpanzee
Macaque
Dog
chr6_cox_hap2
HIX0166141
ZNRD1AS
RecName: Full=Uncharacterized protein C6orf12; AltName: Full=Protein HTEX4;

Cassette

Internal donor

Alternative last exon

Subcellular localization signal
Mouse
Rat
Chimpanzee
Macaque
Dog
chr6_cox_hap2
HIX0166142
PPP1R11
Protein phosphatase 1, regulatory (inhibitor) subunit 11.

Cassette

Retained intron

Mouse
Rat
Chimpanzee
Macaque
Dog
chr6_cox_hap2
HIX0166143
BAT2
Similar to SubName: Full=HLA-B associated transcript 2; Flags: Fragment;

Internal acceptor

Mouse
Rat
Chimpanzee
Macaque
Dog
chr6_cox_hap2
HIX0166144
NFKBIL1
SubName: Full=IKBL protein; SubName: Full=Nuclear factor of kappa light polypeptide gene enhancer; SubName: Full=Nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor-like 1; SubName: Full=Nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor-like 1, isoform CRA_d; Flags: Fragment;

Internal donor

Alternative first exon

Mouse
Rat
Macaque
chr6_cox_hap2
HIX0166158
HLA-DQB1
SubName: Full=Major histocompatibility complex, class II, DQ beta 1; SubName: Full=MHC class II antigen;

Internal acceptor

Protein motif
Subcellular localization signal
Mouse
Rat
Chimpanzee
Macaque
Dog
chr6_cox_hap2
HIX0166159
LTB
Lymphotoxin-beta isoform a.

Cassette

Protein motif
GO
Mouse
Rat
Chimpanzee
Macaque
Dog
chr6_cox_hap2
HIX0166160
HSPA1A
Similar to Heat shock 70kDa protein 1B.

Internal acceptor

Internal donor

Retained intron

Protein motif
Mouse
Rat
Chimpanzee
Macaque
chr6_cox_hap2
HIX0166163
OR5V1
7TM GPCR, rhodopsin-like family protein.

Alternative first exon

Mouse
Rat
Chimpanzee
Macaque
Dog
chr6_cox_hap2
HIX0166166
LY6G5C
SubName: Full=LY6G5C, isoform A; Flags: Fragment;

Cassette

Internal donor

Mutually exclusive

Retained intron

Alternative first exon

Subcellular localization signal
Transmembrane domain
Mouse
Rat
Chimpanzee
Macaque
Dog
chr6_cox_hap2
HIX0166168
POU5F1
Similar to SubName: Full=Octamer-binding protein 4; Flags: Fragment;

Internal donor

Protein motif
GO
Subcellular localization signal
Mouse
Rat
Chimpanzee
Macaque
Dog
chr6_dbb_hap3
HIX0166330
DDAH2
Dimethylarginine dimethylaminohydrolase 2.

Retained intron

Mouse
Rat
Chimpanzee
Macaque
Dog
chr6_dbb_hap3
HIX0166336
VPS52
Vacuolar protein sorting 52.

Cassette

Internal donor

Retained intron

Alternative first exon

Protein motif
Subcellular localization signal
Mouse
Rat
Chimpanzee
Macaque
Dog
chr6_dbb_hap3
HIX0166338
GNL1
Guanine nucleotide binding protein-like 1.

Cassette

Internal acceptor

Internal donor

Mutually exclusive

Retained intron

Alternative first exon

Protein motif
GO
Subcellular localization signal
Mouse
Rat
Macaque
Dog
chr6_dbb_hap3
HIX0166339
SLC44A4
RecName: Full=Choline transporter-like protein 4; AltName: Full=Solute carrier family 44 member 4;

Alternative first exon

Mouse
Rat
Chimpanzee
Macaque
Dog
chr6_dbb_hap3
HIX0166343
HCG18
Conserved hypothetical protein.

Internal donor

Mouse
Rat
Chimpanzee
Macaque
Dog
chr6_dbb_hap3
HIX0166344
MUC21
RecName: Full=Mucin-21; Short=MUC-21; AltName: Full=Epiglycanin; Flags: Precursor;

Internal donor

Retained intron

Subcellular localization signal
Mouse
Rat
Chimpanzee
Macaque
Dog
chr6_dbb_hap3
HIX0166347
C6orf25
G6B protein isoform G6b-A precursor.

Internal acceptor

Retained intron

Mouse
Rat
Chimpanzee
Macaque
Dog
chr6_dbb_hap3
HIX0166349

Similar to SubName: Full=Ribosomal-like PROTEIN=HLA-F product; Flags: Fragment;

Cassette

Internal acceptor

Mutually exclusive

Retained intron

Alternative last exon

Mouse
Rat
Chimpanzee
Dog
chr6_dbb_hap3
HIX0166352
RGL2
Ral guanine nucleotide dissociation stimulator-like 2.

Cassette

Internal acceptor

Retained intron

Protein motif
GO
Subcellular localization signal
Mouse
Macaque
Dog
chr6_dbb_hap3
HIX0166355
HLA-F
MHC class I, alpha chain, alpha1 and alpha2 domain containing protein.

Cassette

Internal acceptor

Internal donor

Retained intron

Alternative last exon

Protein motif
Transmembrane domain
Mouse
Rat
Chimpanzee
Macaque
Dog
chr6_dbb_hap3
HIX0166356
TRIM26
Tripartite motif-containing 26.

Cassette

Internal acceptor

Retained intron

Protein motif
GO
Subcellular localization signal
Mouse
Rat
Chimpanzee
Macaque
Dog
chr6_dbb_hap3
HIX0166361
TUBB
Tubulin, beta.

Cassette

Internal acceptor

Internal donor

Alternative first exon

Protein motif
Subcellular localization signal
Mouse
Rat
Chimpanzee
Macaque
Dog
chr6_dbb_hap3
HIX0166363
ZNF311
Similar to SubName: Full=Regulator of sex-limitation candidate 3;

Internal acceptor

Internal donor

Retained intron

Mouse
Rat
Chimpanzee
Macaque
Dog
chr6_dbb_hap3
HIX0166366
WDR46
WD repeat domain 46.

Internal acceptor

Internal donor

Mouse
Chimpanzee
Macaque
Dog
chr6_dbb_hap3
HIX0166369
NEU1
Neuraminidase precursor.

Cassette

Internal acceptor

Internal donor

Retained intron

Subcellular localization signal
Mouse
Rat
Chimpanzee
Macaque
Dog
chr6_dbb_hap3
HIX0166371
HLA-DRB5
RecName: Full=HLA class II histocompatibility antigen, DRB1-9 beta chain; AltName: Full=MHC class I antigen DRB1*9; Short=DR-9; Short=DR9; Flags: Precursor;

5'-end AS

Mouse
Rat
Chimpanzee
Macaque
chr6_dbb_hap3
HIX0166372
PSMB8
Proteasome beta 8 subunit isoform E1 proprotein.

Alternative first exon

Subcellular localization signal
Mouse
Rat
Chimpanzee
Macaque
Dog
chr6_dbb_hap3
HIX0166376
TRIM39
Tripartite motif-containing 39 isoform 1.

Cassette

Internal acceptor

Retained intron

Alternative first exon

Protein motif
Subcellular localization signal
Mouse
Rat
Chimpanzee
Macaque
Dog
chr6_dbb_hap3
HIX0166377
HLA-DPB1
Major histocompatibility complex, class II, DP beta 1 precursor.

Cassette

Internal donor

Alternative last exon

Mouse
Rat
Chimpanzee
Macaque
Dog
chr6_dbb_hap3
HIX0166380
BAT4
HLA-B associated transcript 4.

Alternative first exon

Mouse
Rat
Chimpanzee
Macaque
Dog
chr6_dbb_hap3
HIX0166384
ZNRD1
Zinc ribbon domain containing 1.

Retained intron

Mouse
Rat
Chimpanzee
Macaque
Dog
chr6_dbb_hap3
HIX0166385
HLA-DQB1
SubName: Full=MHC class II antigen;

Cassette

Alternative last exon

Protein motif
Subcellular localization signal
Transmembrane domain
Mouse
Rat
Chimpanzee
Macaque
Dog
chr6_dbb_hap3
HIX0166387
GABBR1
Gamma-aminobutyric acid (GABA) B receptor 1 isoform a precursor.

Cassette

Internal acceptor

Internal donor

Retained intron

Alternative first exon

Alternative last exon

Protein motif
GO
Transmembrane domain
Mouse
Rat
Chimpanzee
Macaque
Dog
chr6_dbb_hap3
HIX0166389
TAP1
Transporter 1, ATP-binding cassette, sub-family B.

Retained intron

Alternative first exon

Protein motif
GO
Subcellular localization signal
Mouse
Rat
Chimpanzee
Macaque
Dog
chr6_dbb_hap3
HIX0166390
SKIV2L
Superkiller viralicidic activity 2-like homolog.

Cassette

Internal acceptor

Mutually exclusive

Retained intron

Protein motif
GO
Subcellular localization signal
Mouse
Rat
Chimpanzee
Macaque
Dog
chr6_dbb_hap3
HIX0166393
HLA-H
HLA class I histocompatibility antigen, A-2 alpha chain precursor (MHC class I antigen A*2).

3'-end AS

Mouse
Rat
Chimpanzee
Dog
chr6_dbb_hap3
HIX0166399
MDC1
Similar to Mediator of DNA-damage checkpoint 1.

Cassette

Internal acceptor

Internal donor

Retained intron

Alternative first exon

Protein motif
Subcellular localization signal
Mouse
Rat
Chimpanzee
Macaque
Dog
chr6_dbb_hap3
HIX0166401
OR2H1
Olfactory receptor, family 2, subfamily H, member 1.

Cassette

Internal acceptor

Retained intron

Alternative first exon

Mouse
Rat
Chimpanzee
Macaque
Dog
chr6_dbb_hap3
HIX0166402
CLIC1
Chloride intracellular channel 1.

5'-end AS

Mouse
Rat
Chimpanzee
Macaque
Dog
chr6_dbb_hap3
HIX0166406
PFDN6
HLA class II region expressed gene KE2.

Alternative last exon

Protein motif
Mouse
Chimpanzee
Macaque
Dog
chr6_dbb_hap3
HIX0166412
CCHCR1
Coiled-coil alpha-helical rod protein 1 isoform 3.

Internal acceptor

Retained intron

Alternative first exon

Protein motif
Mouse
Rat
Chimpanzee
Macaque
Dog
chr6_dbb_hap3
HIX0166413
RPS18
Ribosomal protein S18.

Cassette

Retained intron

Protein motif
GO
Subcellular localization signal
Mouse
Rat
Chimpanzee
Macaque
Dog
chr6_dbb_hap3
HIX0166415
ZNRD1AS
RecName: Full=Uncharacterized protein C6orf12; AltName: Full=Protein HTEX4;

Cassette

Internal donor

Alternative last exon

Subcellular localization signal
Mouse
Rat
Chimpanzee
Macaque
Dog
chr6_dbb_hap3
HIX0166418
PPP1R11
Protein phosphatase 1, regulatory (inhibitor) subunit 11.

Cassette

Retained intron

Mouse
Rat
Chimpanzee
Macaque
Dog
chr6_dbb_hap3
HIX0166422
LY6G6F
G6f protein.

Cassette

Internal acceptor

Retained intron

Alternative first exon

Alternative last exon

Subcellular localization signal
Transmembrane domain
Mouse
Rat
Chimpanzee
Macaque
Dog
chr6_dbb_hap3
HIX0166424
TRIM10
Tripartite motif-containing 10 isoform 2.

Retained intron

Mouse
Rat
Chimpanzee
Macaque
Dog
chr6_dbb_hap3
HIX0166435
VARS
Valyl-tRNA synthetase.

Cassette

Internal donor

Protein motif
Mouse
Rat
Chimpanzee
Macaque
Dog
chr6_dbb_hap3
HIX0166437
MOG
RecName: Full=Myelin-oligodendrocyte glycoprotein; Flags: Precursor;

Cassette

Internal acceptor

Mutually exclusive

Retained intron

Alternative first exon

Alternative last exon

Protein motif
Subcellular localization signal
Transmembrane domain
Mouse
Rat
Chimpanzee
Macaque
chr6_dbb_hap3
HIX0166446

Similar to SubName: Full=Heat shock 70kDa protein 1-like; SubName: Full=Heat shock 70kDa protein 1-like variant; Flags: Fragment;

Retained intron

Alternative first exon

Protein motif
Mouse
Rat
Chimpanzee
Macaque
Dog
chr6_dbb_hap3
HIX0166450
BTNL2
Similar to Butyrophilin-like 2.

3'-end AS

Mouse
Rat
Macaque
Dog
chr6_dbb_hap3
HIX0166454
POU5F1
Similar to SubName: Full=Octamer-binding protein 4; Flags: Fragment;

Internal donor

Protein motif
GO
Subcellular localization signal
Mouse
Rat
Chimpanzee
Macaque
Dog
chr6_dbb_hap3
HIX0166456
LY6G6C
Lymphocyte antigen 6 complex G6C.

Cassette

Mouse
Rat
Chimpanzee
Macaque
Dog
chr6_mann_hap4
HIX0166611
KIAA1949
Phostensin.

Cassette

Internal acceptor

Internal donor

Retained intron

Mouse
Rat
Chimpanzee
Macaque
Dog
chr6_mann_hap4
HIX0166612
DDAH2
Dimethylarginine dimethylaminohydrolase 2.

Retained intron

Mouse
Rat
Chimpanzee
Macaque
Dog
chr6_mann_hap4
HIX0166613
MRPS18B
Mitochondrial ribosomal protein S18B.

Cassette

Internal donor

Mutually exclusive

Retained intron

Protein motif
GO
Mouse
Rat
Chimpanzee
Macaque
Dog
chr6_mann_hap4
HIX0166615
C6orf134
RecName: Full=UPF0635 protein C6orf134;

Cassette

Internal donor

Retained intron

Alternative first exon

Alternative last exon

Protein motif
Subcellular localization signal
Mouse
Rat
Chimpanzee
Macaque
Dog
chr6_mann_hap4
HIX0166616
LY6G6E
HLA-B associated transcript 5.

Cassette

Internal acceptor

Retained intron

Alternative first exon

Alternative last exon

Protein motif
GO
Subcellular localization signal
Mouse
Rat
Chimpanzee
Macaque
Dog
chr6_mann_hap4
HIX0166617
GNL1
Guanine nucleotide binding protein-like 1.

Cassette

Internal acceptor

Internal donor

Alternative first exon

Subcellular localization signal
Mouse
Rat
Chimpanzee
Macaque
Dog
chr6_mann_hap4
HIX0166621
AGPAT1
1-acylglycerol-3-phosphate O-acyltransferase 1.

Cassette

Internal acceptor

Internal donor

Alternative first exon

Protein motif
GO
Subcellular localization signal
Transmembrane domain
Mouse
Rat
Chimpanzee
Macaque
Dog
chr6_mann_hap4
HIX0166623
C6orf25
G6B protein isoform G6b-A precursor.

Retained intron

Mouse
Rat
Chimpanzee
Macaque
Dog
chr6_mann_hap4
HIX0166626
HLA-F
MHC class I, alpha chain, alpha1 and alpha2 domain containing protein.

Cassette

Internal acceptor

Internal donor

Retained intron

Alternative last exon

Protein motif
Transmembrane domain
Mouse
Rat
Chimpanzee
Dog
chr6_mann_hap4
HIX0166627
TUBB
Tubulin, beta.

Cassette

Internal acceptor

Internal donor

Alternative first exon

Protein motif
Subcellular localization signal
Mouse
Rat
Chimpanzee
Macaque
Dog
chr6_mann_hap4
HIX0166630
ZNF311
Similar to SubName: Full=Regulator of sex-limitation candidate 3;

Internal acceptor

Internal donor

Retained intron

Mouse
Rat
Chimpanzee
Macaque
Dog
chr6_mann_hap4
HIX0166633
SLC39A7
Solute carrier family 39, member 7.

Cassette

Internal acceptor

Internal donor

Retained intron

Alternative first exon

Protein motif
Transmembrane domain
Mouse
Rat
Chimpanzee
Macaque
Dog
chr6_mann_hap4
HIX0166634
NEU1
Neuraminidase precursor.

Cassette

Internal acceptor

Internal donor

Retained intron

Subcellular localization signal
Mouse
Rat
Chimpanzee
Macaque
Dog
chr6_mann_hap4
HIX0166636
HLA-DRB5
RecName: Full=HLA class II histocompatibility antigen, DRB1-9 beta chain; AltName: Full=MHC class I antigen DRB1*9; Short=DR-9; Short=DR9; Flags: Precursor;

5'-end AS

Mouse
Rat
Chimpanzee
Macaque
Dog
chr6_mann_hap4
HIX0166640
RNF5
Ring finger protein 5.

Alternative last exon

Transmembrane domain
Mouse
Rat
Chimpanzee
Macaque
Dog
chr6_mann_hap4
HIX0166641
GTF2H4
General transcription factor IIH, polypeptide 4, 52kDa.

Internal donor

Mouse
Rat
Chimpanzee
Macaque
Dog
chr6_mann_hap4
HIX0166650
AGER
Advanced glycosylation end product-specific receptor isoform 1 precursor.

Cassette

Internal acceptor

Internal donor

Mutually exclusive

Retained intron

Alternative last exon

Protein motif
Subcellular localization signal
Transmembrane domain
Mouse
Rat
Chimpanzee
Macaque
Dog
chr6_mann_hap4
HIX0166652
TNF
Tumor necrosis factor alpha.

5'-end AS

Mouse
Rat
Chimpanzee
Macaque
Dog
chr6_mann_hap4
HIX0166653
MDC1
Similar to Mediator of DNA-damage checkpoint 1.

Cassette

Internal acceptor

Internal donor

Retained intron

Alternative first exon

Protein motif
Subcellular localization signal
Mouse
Rat
Chimpanzee
Macaque
Dog
chr6_mann_hap4
HIX0166654
HLA-B
RecName: Full=HLA class I histocompatibility antigen, B-49 alpha chain; AltName: Full=MHC class I antigen B*49; AltName: Full=B-21; Flags: Precursor;

Retained intron

Protein motif
Subcellular localization signal
Mouse
Rat
Chimpanzee
Macaque
Dog
chr6_mann_hap4
HIX0166662
NCR3
Natural cytotoxicity triggering receptor 3 isoform a.

Internal acceptor

Alternative last exon

Mouse
Rat
Chimpanzee
Macaque
Dog
chr6_mann_hap4
HIX0166663
HLA-E
Major histocompatibility complex, class I, E precursor.

Internal acceptor

Internal donor

Retained intron

Protein motif
Subcellular localization signal
Mouse
Rat
Chimpanzee
Macaque
Dog
chr6_mann_hap4
HIX0166667
LST1
Leukocyte specific transcript 1 isoform 4.

Cassette

Internal acceptor

Internal donor

Mutually exclusive

Retained intron

Alternative first exon

Protein motif
GO
Subcellular localization signal
Transmembrane domain
Mouse
Rat
Chimpanzee
Macaque
Dog
chr6_mann_hap4
HIX0166668

Similar to MICB protein (Fragment).

Retained intron

Protein motif
GO
Mouse
Rat
Macaque
Dog
chr6_mann_hap4
HIX0166669
ABCF1
ATP-binding cassette, sub-family F, member 1 isoform a.

Cassette

Mouse
Rat
Chimpanzee
Macaque
Dog
chr6_mann_hap4
HIX0166671
ZNRD1AS
RecName: Full=Uncharacterized protein C6orf12; AltName: Full=Protein HTEX4;

Alternative first exon

Subcellular localization signal
Mouse
Rat
Chimpanzee
Macaque
chr6_mann_hap4
HIX0166675
BAT2
Similar to SubName: Full=HLA-B associated transcript 2; Flags: Fragment;

Internal acceptor

Internal donor

Retained intron

Subcellular localization signal
Mouse
Rat
Chimpanzee
Macaque
Dog
chr6_mann_hap4
HIX0166676
NFKBIL1
SubName: Full=IKBL protein; SubName: Full=Nuclear factor of kappa light polypeptide gene enhancer; SubName: Full=Nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor-like 1; SubName: Full=Nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor-like 1, isoform CRA_d; Flags: Fragment;

Internal donor

Alternative first exon

Mouse
Rat
Chimpanzee
Macaque
Dog
chr6_mann_hap4
HIX0166677
TRIM10
Tripartite motif-containing 10 isoform 2.

Retained intron

Mouse
Rat
Chimpanzee
Macaque
Dog
chr6_mann_hap4
HIX0166683
HLA-A
HLA class I histocompatibility antigen, A-29 alpha chain precursor (MHC class I antigen A*29) (Aw-19).

3'-end AS

Mouse
Rat
Chimpanzee
Macaque
Dog
chr6_mann_hap4
HIX0166684
PPP1R10
Protein phosphatase 1, regulatory subunit 10.

Internal acceptor

Mouse
Rat
Chimpanzee
Macaque
Dog
chr6_mann_hap4
HIX0166689
MOG
Myelin-oligodendrocyte glycoprotein precursor.

Cassette

Internal acceptor

Mutually exclusive

Retained intron

Alternative first exon

Alternative last exon

Protein motif
Subcellular localization signal
Transmembrane domain
Mouse
Rat
Chimpanzee
Macaque
Dog
chr6_mann_hap4
HIX0166695
LTB
Lymphotoxin-beta isoform a.

Cassette

Protein motif
GO
Mouse
Rat
Chimpanzee
Macaque
Dog
chr6_mann_hap4
HIX0166700
HLA-DOA
Major histocompatibility complex, class II, DO alpha precursor.

Cassette

Internal acceptor

Retained intron

Protein motif
Subcellular localization signal
Transmembrane domain
Mouse
Rat
Chimpanzee
Macaque
Dog
chr6_mann_hap4
HIX0166702

7TM GPCR, rhodopsin-like family protein.

Alternative first exon

Mouse
Rat
Chimpanzee
Macaque
Dog
chr6_mann_hap4
HIX0166710
LY6G6C
Lymphocyte antigen 6 complex G6C.

Cassette

Mouse
Rat
Chimpanzee
Macaque
Dog
chr6_mann_hap4
HIX0166717
BTNL2
Similar to Butyrophilin-like 2.

Cassette

Alternative last exon

Rat
Chimpanzee
Macaque
Dog
chr6_mann_hap4
HIX0166728
RING1
Ring finger protein 1.

3'-end AS

Mouse
Rat
Macaque
Dog
chr6_mcf_hap5
HIX0166859
KIAA1949
Phostensin.

Cassette

Internal acceptor

Internal donor

Retained intron

Mouse
Rat
Chimpanzee
Macaque
Dog
chr6_mcf_hap5
HIX0166860
DDAH2
Dimethylarginine dimethylaminohydrolase 2.

Retained intron

Mouse
Rat
Chimpanzee
Macaque
Dog
chr6_mcf_hap5
HIX0166862
MRPS18B
Mitochondrial ribosomal protein S18B.

Cassette

Internal donor

Mutually exclusive

Retained intron

Protein motif
GO
Mouse
Rat
Chimpanzee
Macaque
Dog
chr6_mcf_hap5
HIX0166863
CCHCR1
Coiled-coil alpha-helical rod protein 1 isoform 3.

Alternative first exon

Mouse
Rat
Chimpanzee
Macaque
Dog
chr6_mcf_hap5
HIX0166865
C6orf134
RecName: Full=UPF0635 protein C6orf134;

Cassette

Internal donor

Retained intron

Alternative first exon

Alternative last exon

Protein motif
Subcellular localization signal
Mouse
Rat
Chimpanzee
Macaque
Dog
chr6_mcf_hap5
HIX0166866
VARS2
Transcription factor Tfb2 family protein.

Internal acceptor

Retained intron

Protein motif
Subcellular localization signal
Mouse
Rat
Chimpanzee
Macaque
Dog
chr6_mcf_hap5
HIX0166867
GNL1
Guanine nucleotide binding protein-like 1.

Cassette

Internal acceptor

Internal donor

Alternative first exon

Subcellular localization signal
Mouse
Rat
Chimpanzee
Macaque
Dog
chr6_mcf_hap5
HIX0166868
SLC44A4
RecName: Full=Choline transporter-like protein 4; AltName: Full=Solute carrier family 44 member 4;

Cassette

Internal acceptor

Internal donor

Retained intron

Alternative first exon

Alternative last exon

Protein motif
Subcellular localization signal
Transmembrane domain
Mouse
Rat
Chimpanzee
Macaque
Dog
chr6_mcf_hap5
HIX0166870
PRRT1
Interferon-induced transmembrane protein family protein.

Internal acceptor

Retained intron

Subcellular localization signal
Mouse
Rat
Chimpanzee
Macaque
Dog
chr6_mcf_hap5
HIX0166872
AGPAT1
1-acylglycerol-3-phosphate O-acyltransferase 1.

Cassette

Internal acceptor

Internal donor

Retained intron

Alternative first exon

Protein motif
GO
Subcellular localization signal
Transmembrane domain
Mouse
Chimpanzee
Macaque
Dog
chr6_mcf_hap5
HIX0166875
C6orf25
G6B protein isoform G6b-A precursor.

Internal acceptor

Retained intron

Mouse
Rat
Chimpanzee
Macaque
Dog
chr6_mcf_hap5
HIX0166881
TUBB
Tubulin, beta.

Cassette

Internal acceptor

Internal donor

Alternative first exon

Protein motif
Subcellular localization signal
Mouse
Rat
Macaque
Dog
chr6_mcf_hap5
HIX0166886
SLC39A7
Solute carrier family 39, member 7.

Cassette

Internal acceptor

Internal donor

Retained intron

Alternative first exon

Protein motif
Transmembrane domain
Mouse
Rat
Macaque
Dog
chr6_mcf_hap5
HIX0166887
PSMB8
Proteasome beta 8 subunit isoform E1 proprotein.

Alternative first exon

Subcellular localization signal
Mouse
Rat
Chimpanzee
Macaque
Dog
chr6_mcf_hap5
HIX0166888
RXRB
Retinoid X receptor, beta.

Cassette

Internal acceptor

Alternative first exon

Protein motif
GO
Subcellular localization signal
Mouse
Rat
Chimpanzee
Macaque
Dog
chr6_mcf_hap5
HIX0166889
TCF19
Similar to Transcription factor 19.

Internal acceptor

Retained intron

Subcellular localization signal
Mouse
Rat
Chimpanzee
Macaque
Dog
chr6_mcf_hap5
HIX0166890
RING1
Ring finger protein 1.

Internal acceptor

Internal donor

Protein motif
GO
Mouse
Rat
Macaque
Dog
chr6_mcf_hap5
HIX0166891
PBX2
Pre-B-cell leukemia homeobox 2.

3'-end AS

Mouse
Rat
Chimpanzee
Macaque
Dog
chr6_mcf_hap5
HIX0166892
BAT3
HLA-B associated transcript-3 isoform b.

Cassette

Internal acceptor

Internal donor

Alternative first exon

Alternative last exon

Mouse
Rat
Chimpanzee
Dog
chr6_mcf_hap5
HIX0166897
BAT4
HLA-B associated transcript 4.

Internal donor

Alternative first exon

Mouse
Rat
Chimpanzee
Macaque
Dog
chr6_mcf_hap5
HIX0166898
DHX16
DEAH (Asp-Glu-Ala-His) box polypeptide 16.

Internal donor

Alternative first exon

Protein motif
Subcellular localization signal
Mouse
Rat
Chimpanzee
Macaque
Dog
chr6_mcf_hap5
HIX0166901
HLA-DPA1
Major histocompatibility complex, class II, DP alpha 1 precursor.

Retained intron

Subcellular localization signal
Mouse
Rat
Chimpanzee
Macaque
Dog
chr6_mcf_hap5
HIX0166904
VARS
Valyl-tRNA synthetase.

Cassette

Internal donor

Protein motif
Mouse
Rat
Chimpanzee
Macaque
Dog
chr6_mcf_hap5
HIX0166906
HLA-DOA
Major histocompatibility complex, class II, DO alpha precursor.

Internal acceptor

Protein motif
GO
Mouse
Rat
Chimpanzee
Macaque
Dog
chr6_mcf_hap5
HIX0166907
TAP1
Transporter 1, ATP-binding cassette, sub-family B.

Retained intron

Alternative first exon

Protein motif
GO
Subcellular localization signal
Mouse
Rat
Chimpanzee
Macaque
Dog
chr6_mcf_hap5
HIX0166909
C6orf136
Protein of unknown function DUF2358 region containing protein.

Alternative first exon

Mouse
Rat
Chimpanzee
Macaque
Dog
chr6_mcf_hap5
HIX0166910
NOTCH4
GoLoco motif conserved site containing protein.

Internal acceptor

Subcellular localization signal
Rat
Chimpanzee
Macaque
Dog
chr6_mcf_hap5
HIX0166911
AGER
Advanced glycosylation end product-specific receptor isoform 1 precursor.

Cassette

Internal acceptor

Internal donor

Retained intron

Protein motif
Subcellular localization signal
Transmembrane domain
Mouse
Rat
Chimpanzee
Macaque
Dog
chr6_mcf_hap5
HIX0166912
APOM
Apolipoprotein M.

Alternative first exon

Rat
Chimpanzee
Macaque
Dog
chr6_mcf_hap5
HIX0166914
TNF
Tumor necrosis factor alpha.

5'-end AS

Mouse
Rat
Chimpanzee
Dog
chr6_mcf_hap5
HIX0166916
MDC1
Similar to Mediator of DNA-damage checkpoint 1.

Cassette

Internal acceptor

Internal donor

Retained intron

Alternative first exon

Protein motif
Subcellular localization signal
Mouse
Macaque
Dog
chr6_mcf_hap5
HIX0166917
OR2H1
Olfactory receptor, family 2, subfamily H, member 1.

Cassette

Internal acceptor

Retained intron

Alternative first exon

Mouse
Rat
Macaque
Dog
chr6_mcf_hap5
HIX0166928
HLA-E
Major histocompatibility complex, class I, E precursor.

Internal acceptor

Internal donor

Retained intron

Protein motif
Subcellular localization signal
Mouse
Rat
Chimpanzee
Macaque
Dog
chr6_mcf_hap5
HIX0166929
PSMB9
Proteasome beta 9 subunit isoform 1 proprotein.

Cassette

Retained intron

Protein motif
GO
Subcellular localization signal
Mouse
Rat
Chimpanzee
Macaque
Dog
chr6_mcf_hap5
HIX0166931
TAPBP
Tapasin isoform 1 precursor.

Cassette

Internal donor

Retained intron

Alternative last exon

Protein motif
Subcellular localization signal
Transmembrane domain
Mouse
Rat
Chimpanzee
Macaque
Dog
chr6_mcf_hap5
HIX0166938
ABCF1
ATP-binding cassette, sub-family F, member 1 isoform a.

Cassette

Mouse
Rat
Chimpanzee
Macaque
Dog
chr6_mcf_hap5
HIX0166941
PPP1R11
Protein phosphatase 1, regulatory (inhibitor) subunit 11.

Cassette

Retained intron

Mouse
Rat
Chimpanzee
Macaque
Dog
chr6_mcf_hap5
HIX0166943
BAT2
Similar to SubName: Full=HLA-B associated transcript 2; Flags: Fragment;

Internal acceptor

Internal donor

Retained intron

Subcellular localization signal
Chimpanzee
Macaque
Dog
chr6_mcf_hap5
HIX0166948
RNF39
Ring finger protein 39 isoform 1.

Cassette

Internal acceptor

Internal donor

Protein motif
Mouse
Rat
Chimpanzee
Macaque
Dog
chr6_mcf_hap5
HIX0166950
LY6G5B
Casein kinase 2, beta polypeptide.

Retained intron

Protein motif
Subcellular localization signal
Mouse
Rat
Chimpanzee
Macaque
Dog
chr6_mcf_hap5
HIX0166952
PPP1R10
Protein phosphatase 1, regulatory subunit 10.

Internal acceptor

Mouse
Rat
Chimpanzee
Macaque
Dog
chr6_mcf_hap5
HIX0166957
HLA-DRA
RecName: Full=HLA class II histocompatibility antigen, DR alpha chain; AltName: Full=MHC class II antigen DRA; Flags: Precursor;

Cassette

Internal acceptor

Internal donor

Protein motif
Transmembrane domain
Mouse
Rat
Chimpanzee
Macaque
Dog
chr6_mcf_hap5
HIX0166962
OR5V1
7TM GPCR, rhodopsin-like family protein.

Alternative first exon

Mouse
Rat
Chimpanzee
Macaque
Dog
chr6_mcf_hap5
HIX0166963
LY6G6F
G6f protein.

Internal acceptor

Retained intron

Subcellular localization signal
Mouse
Rat
Chimpanzee
Macaque
Dog
chr6_mcf_hap5
HIX0166964
LY6G5C
SubName: Full=LY6G5C, isoform A; Flags: Fragment;

Cassette

Internal donor

Mutually exclusive

Retained intron

Alternative first exon

Subcellular localization signal
Transmembrane domain
Mouse
Rat
Chimpanzee
Macaque
Dog
chr6_mcf_hap5
HIX0166965
PRR3
Similar to SubName: Full=Proline-rich protein 3; Flags: Fragment;

Cassette

Mouse
Rat
Chimpanzee
Macaque
Dog
chr6_mcf_hap5
HIX0166968
POU5F1
POU domain, class 5, transcription factor 1 isoform 1.

Internal donor

Protein motif
GO
Subcellular localization signal
Mouse
Rat
Chimpanzee
Macaque
Dog
chr6_mcf_hap5
HIX0166970
LY6G6C
Lymphocyte antigen 6 complex G6C.

Cassette

Mouse
Rat
Chimpanzee
Macaque
Dog
chr6_qbl_hap6
HIX0167118
KIAA1949
Phostensin.

Cassette

Internal acceptor

Internal donor

Retained intron

Mouse
Rat
Chimpanzee
Macaque
Dog
chr6_qbl_hap6
HIX0167119
DDAH2
Dimethylarginine dimethylaminohydrolase 2.

Retained intron

Mouse
Rat
Chimpanzee
Macaque
Dog
chr6_qbl_hap6
HIX0167123
C6orf134
RecName: Full=UPF0635 protein C6orf134;

Cassette

Internal donor

Retained intron

Alternative first exon

Alternative last exon

Protein motif
Subcellular localization signal
Mouse
Rat
Chimpanzee
Macaque
Dog
chr6_qbl_hap6
HIX0167124
VARS2
Transcription factor Tfb2 family protein.

Internal acceptor

Retained intron

Protein motif
Subcellular localization signal
Mouse
Rat
Macaque
Dog
chr6_qbl_hap6
HIX0167125
GNL1
Guanine nucleotide binding protein-like 1.

Cassette

Internal acceptor

Internal donor

Mutually exclusive

Retained intron

Alternative first exon

Protein motif
GO
Subcellular localization signal
Mouse
Rat
Chimpanzee
Macaque
Dog
chr6_qbl_hap6
HIX0167128
CYP21A2
Cytochrome P450, family 21, subfamily A, polypeptide 2 isoform a.

Cassette

Protein motif
Mouse
Rat
Chimpanzee
Macaque
Dog
chr6_qbl_hap6
HIX0167132
HCG18
Conserved hypothetical protein.

Internal donor

Mouse
Rat
Chimpanzee
Macaque
Dog
chr6_qbl_hap6
HIX0167133
AGPAT1
1-acylglycerol-3-phosphate O-acyltransferase 1.

Cassette

Internal acceptor

Internal donor

Retained intron

Alternative first exon

Protein motif
GO
Subcellular localization signal
Transmembrane domain
Mouse
Rat
Chimpanzee
Macaque
Dog
chr6_qbl_hap6
HIX0167135

Similar to SubName: Full=Ribosomal-like PROTEIN=HLA-F product; Flags: Fragment;

Cassette

Internal acceptor

Mutually exclusive

Retained intron

Alternative last exon

Mouse
Rat
Chimpanzee
Macaque
Dog
chr6_qbl_hap6
HIX0167136
HLA-G
MHC class I, alpha chain, alpha1 and alpha2 domain containing protein.

Internal acceptor

Internal donor

Retained intron

Mouse
Rat
Chimpanzee
Macaque
Dog
chr6_qbl_hap6
HIX0167139
RGL2
Ral guanine nucleotide dissociation stimulator-like 2.

Cassette

Internal acceptor

Retained intron

Protein motif
GO
Subcellular localization signal
Mouse
Chimpanzee
Macaque
Dog
chr6_qbl_hap6
HIX0167140
CFB
Complement component 2 isoform 1 preproprotein.

Cassette

Internal donor

Mutually exclusive

Alternative first exon

Alternative last exon

Protein motif
GO
Subcellular localization signal
Mouse
Rat
Chimpanzee
Macaque
Dog
chr6_qbl_hap6
HIX0167141
HLA-F
MHC class I, alpha chain, alpha1 and alpha2 domain containing protein.

Cassette

Internal acceptor

Internal donor

Retained intron

Alternative last exon

Protein motif
Transmembrane domain
Mouse
Rat
Chimpanzee
Macaque
Dog
chr6_qbl_hap6
HIX0167142
TRIM26
Tripartite motif-containing 26.

Cassette

Internal acceptor

Retained intron

Protein motif
GO
Subcellular localization signal
Mouse
Rat
Chimpanzee
Macaque
Dog
chr6_qbl_hap6
HIX0167145
ABCF1
ATP-binding cassette, sub-family F, member 1 isoform a.

Cassette

Internal acceptor

Internal donor

Mutually exclusive

Protein motif
GO
Subcellular localization signal
Mouse
Rat
Chimpanzee
Macaque
Dog
chr6_qbl_hap6
HIX0167146
ZNF311
Similar to SubName: Full=Regulator of sex-limitation candidate 3;

Internal acceptor

Internal donor

Retained intron

Mouse
Rat
Chimpanzee
Macaque
Dog
chr6_qbl_hap6
HIX0167149
SLC39A7
Solute carrier family 39, member 7.

Cassette

Internal acceptor

Internal donor

Retained intron

Alternative first exon

Protein motif
Transmembrane domain
Mouse
Rat
Chimpanzee
Macaque
Dog
chr6_qbl_hap6
HIX0167150
SNORD48
RecName: Full=Protein G8;

Cassette

Mouse
Rat
Chimpanzee
Macaque
Dog
chr6_qbl_hap6
HIX0167151
NEU1
Neuraminidase precursor.

Cassette

Internal acceptor

Internal donor

Retained intron

Subcellular localization signal
Mouse
Rat
Macaque
Dog
chr6_qbl_hap6
HIX0167152
PSMB8
Proteasome beta 8 subunit isoform E1 proprotein.

Retained intron

Alternative first exon

Protein motif
GO
Subcellular localization signal
Mouse
Rat
Chimpanzee
Macaque
Dog
chr6_qbl_hap6
HIX0167154
RNF5
Ring finger protein 5.

Alternative last exon

Transmembrane domain
Mouse
Rat
Chimpanzee
Macaque
Dog
chr6_qbl_hap6
HIX0167156
HLA-DQA1
SubName: Full=Major histocompatibility complex, class II, DQ alpha 1; SubName: Full=MHC class II antigen;

Cassette

Internal donor

Protein motif
Transmembrane domain
Mouse
Rat
Chimpanzee
Macaque
Dog
chr6_qbl_hap6
HIX0167157
DDR1
Discoidin domain receptor family, member 1 isoform b.

Cassette

Alternative first exon

Mouse
Rat
Chimpanzee
Macaque
Dog
chr6_qbl_hap6
HIX0167158
DOM3Z
DOM-3 homolog Z.

Cassette

Internal acceptor

Internal donor

Retained intron

Mouse
Rat
Chimpanzee
Macaque
Dog
chr6_qbl_hap6
HIX0167161
TRIM39
Tripartite motif-containing 39 isoform 2.

Cassette

Retained intron

Protein motif
Subcellular localization signal
Mouse
Rat
Chimpanzee
Macaque
Dog
chr6_qbl_hap6
HIX0167162
C4A
SubName: Full=ZA protein;

Internal acceptor

Internal donor

Protein motif
GO
Subcellular localization signal
Mouse
Rat
Chimpanzee
Macaque
Dog
chr6_qbl_hap6
HIX0167164
TRIM27
Ret finger protein.

Retained intron

Mouse
Rat
Chimpanzee
Macaque
Dog
chr6_qbl_hap6
HIX0167166
C6orf136
Protein of unknown function DUF2358 region containing protein.

Alternative first exon

Mouse
Rat
Chimpanzee
Macaque
Dog
chr6_qbl_hap6
HIX0167167
TRIM31
Tripartite motif protein 31.

Retained intron

Rat
Chimpanzee
Macaque
chr6_qbl_hap6
HIX0167170
AGER
Advanced glycosylation end product-specific receptor isoform 1 precursor.

Cassette

Internal acceptor

Internal donor

Mutually exclusive

Retained intron

Alternative last exon

Protein motif
Subcellular localization signal
Transmembrane domain
Mouse
Rat
Chimpanzee
Macaque
Dog
chr6_qbl_hap6
HIX0167175
MDC1
Similar to Mediator of DNA-damage checkpoint 1.

Cassette

Internal acceptor

Internal donor

Retained intron

Alternative first exon

Protein motif
Subcellular localization signal
Rat
Chimpanzee
Macaque
Dog
chr6_qbl_hap6
HIX0167177
GABBR1
Gamma-aminobutyric acid (GABA) B receptor 1 isoform a precursor.

Cassette

Internal acceptor

Internal donor

Retained intron

Protein motif
GO
Transmembrane domain
Mouse
Rat
Chimpanzee
Macaque
Dog
chr6_qbl_hap6
HIX0167180
HLA-C
HLA class I histocompatibility antigen, B-35 alpha chain precursor (MHC class I antigen B*35).

Retained intron

Protein motif
GO
Subcellular localization signal
Mouse
Rat
Chimpanzee
Macaque
Dog
chr6_qbl_hap6
HIX0167182
HSPA1L
Similar to SubName: Full=Heat shock 70kDa protein 1-like; SubName: Full=Heat shock 70kDa protein 1-like variant; Flags: Fragment;

Retained intron

Alternative first exon

Protein motif
Mouse
Rat
Chimpanzee
Macaque
Dog
chr6_qbl_hap6
HIX0167184
PFDN6
HLA class II region expressed gene KE2.

Alternative last exon

Protein motif
Mouse
Chimpanzee
Macaque
Dog
chr6_qbl_hap6
HIX0167186
NCR3
Natural cytotoxicity triggering receptor 3 isoform a.

Internal acceptor

Alternative last exon

Mouse
Rat
Chimpanzee
Macaque
Dog
chr6_qbl_hap6
HIX0167189
RPS18
Ribosomal protein S18.

Cassette

Retained intron

Protein motif
GO
Subcellular localization signal
Mouse
Rat
Chimpanzee
Macaque
Dog
chr6_qbl_hap6
HIX0167190
LST1
Leukocyte specific transcript 1 isoform 4.

Cassette

Internal acceptor

Internal donor

Mutually exclusive

Retained intron

Alternative first exon

Protein motif
GO
Subcellular localization signal
Transmembrane domain
Mouse
Rat
Chimpanzee
Macaque
Dog
chr6_qbl_hap6
HIX0167194
NFKBIL1
SubName: Full=IKBL protein; SubName: Full=Nuclear factor of kappa light polypeptide gene enhancer; SubName: Full=Nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor-like 1; SubName: Full=Nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor-like 1, isoform CRA_d; Flags: Fragment;

Internal donor

Alternative first exon

Mouse
Rat
Chimpanzee
Macaque
chr6_qbl_hap6
HIX0167198
CSNK2B
Casein kinase 2, beta polypeptide.

Retained intron

Protein motif
Subcellular localization signal
Mouse
Rat
Chimpanzee
Macaque
Dog
chr6_qbl_hap6
HIX0167199
PPP1R10
Protein phosphatase 1, regulatory subunit 10.

Internal acceptor

Mouse
Rat
Chimpanzee
Macaque
Dog
chr6_qbl_hap6
HIX0167201
MOG
RecName: Full=Myelin-oligodendrocyte glycoprotein; Flags: Precursor;

Cassette

Internal acceptor

Mutually exclusive

Retained intron

Alternative first exon

Alternative last exon

Protein motif
Subcellular localization signal
Transmembrane domain
Mouse
Rat
Chimpanzee
Macaque
Dog
chr6_qbl_hap6
HIX0167202
TNXB
Tenascin XB isoform 2.

Cassette

Internal donor

Alternative last exon

Mouse
Rat
Chimpanzee
chr6_qbl_hap6
HIX0167205
HLA-DRA
RecName: Full=HLA class II histocompatibility antigen, DR alpha chain; AltName: Full=MHC class II antigen DRA; Flags: Precursor;

Cassette

Internal acceptor

Internal donor

Protein motif
Transmembrane domain
Mouse
Rat
Macaque
Dog
chr6_qbl_hap6
HIX0167206
HLA-DQB1
SubName: Full=Major histocompatibility complex, class II, DQ beta 1; SubName: Full=MHC class II antigen;

Internal acceptor

Protein motif
Subcellular localization signal
Mouse
Rat
Chimpanzee
Macaque
Dog
chr6_qbl_hap6
HIX0167207
LTB
Lymphotoxin-beta isoform a.

Cassette

Protein motif
GO
Mouse
Rat
Chimpanzee
Macaque
Dog
chr6_qbl_hap6
HIX0167210

7TM GPCR, rhodopsin-like family protein.

Alternative first exon

Mouse
Rat
Chimpanzee
Macaque
Dog
chr6_qbl_hap6
HIX0167229
RING1
Ring finger protein 1.

3'-end AS

Mouse
Rat
Chimpanzee
Macaque
Dog
chr6_ssto_hap7
HIX0167353
DDAH2
Dimethylarginine dimethylaminohydrolase 2.

Retained intron

Mouse
Rat
Chimpanzee
Macaque
Dog
chr6_ssto_hap7
HIX0167354
FLOT1
Flotillin 1.

Cassette

Protein motif
Mouse
Rat
Chimpanzee
Macaque
Dog
chr6_ssto_hap7
HIX0167355
MRPS18B
Mitochondrial ribosomal protein S18B.

Cassette

Internal donor

Mutually exclusive

Retained intron

Protein motif
GO
Mouse
Rat
Chimpanzee
Macaque
Dog
chr6_ssto_hap7
HIX0167358
SLC44A4
RecName: Full=Choline transporter-like protein 4; AltName: Full=Solute carrier family 44 member 4;

Cassette

Internal acceptor

Internal donor

Retained intron

Alternative first exon

Alternative last exon

Protein motif
Subcellular localization signal
Transmembrane domain
Mouse
Rat
Chimpanzee
Macaque
Dog
chr6_ssto_hap7
HIX0167361
PRRT1
Interferon-induced transmembrane protein family protein.

Internal acceptor

Retained intron

Subcellular localization signal
Mouse
Rat
Chimpanzee
Macaque
Dog
chr6_ssto_hap7
HIX0167364
HCG18
Conserved hypothetical protein.

Internal donor

Mouse
Rat
Chimpanzee
Dog
chr6_ssto_hap7
HIX0167367
C6orf25
G6B protein isoform G6b-A precursor.

Internal acceptor

Retained intron

Mouse
Rat
Chimpanzee
Macaque
Dog
chr6_ssto_hap7
HIX0167368
PSMB9
Proteasome beta 9 subunit isoform 1 proprotein.

Cassette

Retained intron

Protein motif
GO
Subcellular localization signal
Mouse
Rat
Chimpanzee
Macaque
Dog
chr6_ssto_hap7
HIX0167369
EHMT2
Similar to Euchromatic histone-lysine N-methyltransferase 2 isoform b.

5'-end AS

Mouse
Rat
Chimpanzee
Macaque
Dog
chr6_ssto_hap7
HIX0167378
BRD2
Bromodomain containing 2.

Cassette

Alternative first exon

Mouse
Rat
Chimpanzee
Macaque
Dog
chr6_ssto_hap7
HIX0167381
PSMB8
Proteasome beta 8 subunit isoform E1 proprotein.

Alternative first exon

Subcellular localization signal
Mouse
Rat
Chimpanzee
Macaque
Dog
chr6_ssto_hap7
HIX0167382
TCF19
Similar to Transcription factor 19.

Retained intron

Subcellular localization signal
Mouse
Rat
Chimpanzee
Macaque
chr6_ssto_hap7
HIX0167384
CFB
Complement component 2 isoform 1 preproprotein.

Cassette

Internal donor

Alternative first exon

Alternative last exon

Protein motif
GO
Subcellular localization signal
Mouse
Rat
Chimpanzee
Macaque
Dog
chr6_ssto_hap7
HIX0167387
HLA-DRB4
Major histocompatibility complex, class II, DR beta 4 precursor.

5'-end AS

Mouse
Rat
Chimpanzee
Macaque
Dog
chr6_ssto_hap7
HIX0167389
TAP2
Transporter 2, ATP-binding cassette, sub-family B isoform 1.

5'-end AS

3'-end AS

Protein motif
Mouse
Rat
Chimpanzee
Macaque
Dog
chr6_ssto_hap7
HIX0167391
HLA-DPB1
Major histocompatibility complex, class II, DP beta 1 precursor.

Cassette

Internal donor

Alternative last exon

Mouse
Rat
Chimpanzee
Macaque
Dog
chr6_ssto_hap7
HIX0167395
DOM3Z
DOM-3 homolog Z.

Cassette

Internal acceptor

Internal donor

Retained intron

Mouse
Rat
Chimpanzee
Macaque
Dog
chr6_ssto_hap7
HIX0167398
ZNRD1
Zinc ribbon domain containing 1.

Retained intron

Mouse
Rat
Chimpanzee
Macaque
Dog
chr6_ssto_hap7
HIX0167399
HLA-DMB
Major histocompatibility complex, class II, DM alpha precursor.

Internal acceptor

Internal donor

Alternative last exon

Mouse
Rat
Chimpanzee
Macaque
Dog
chr6_ssto_hap7
HIX0167402
TRIM27
Ret finger protein.

Retained intron

Protein motif
Mouse
Rat
Chimpanzee
Macaque
Dog
chr6_ssto_hap7
HIX0167403
TAP1
Transporter 1, ATP-binding cassette, sub-family B.

Retained intron

Alternative first exon

Protein motif
GO
Subcellular localization signal
Mouse
Rat
Chimpanzee
Macaque
Dog
chr6_ssto_hap7
HIX0167404
SKIV2L
Superkiller viralicidic activity 2-like homolog.

Cassette

Internal acceptor

Mutually exclusive

Retained intron

Protein motif
GO
Subcellular localization signal
Mouse
Rat
Chimpanzee
Macaque
Dog
chr6_ssto_hap7
HIX0167409
RDBP
RD RNA-binding protein.

Internal acceptor

Retained intron

Alternative first exon

Mouse
Rat
Chimpanzee
Macaque
Dog
chr6_ssto_hap7
HIX0167410
TNF
Tumor necrosis factor alpha.

5'-end AS

Mouse
Rat
Chimpanzee
Macaque
Dog
chr6_ssto_hap7
HIX0167411
MDC1
Similar to Mediator of DNA-damage checkpoint 1.

Cassette

Internal acceptor

Internal donor

Retained intron

Alternative first exon

Protein motif
Subcellular localization signal
Mouse
Rat
Chimpanzee
Macaque
Dog
chr6_ssto_hap7
HIX0167412
HLA-L
Similar to SubName: Full=Major histocompatibility complex, class I, AG;

Retained intron

Alternative last exon

Subcellular localization signal
Transmembrane domain
Mouse
Rat
Chimpanzee
Macaque
Dog
chr6_ssto_hap7
HIX0167414
CLIC1
Chloride intracellular channel 1.

5'-end AS

Mouse
Rat
Chimpanzee
Macaque
Dog
chr6_ssto_hap7
HIX0167418
TRIM15
SubName: Full=Zn-finger protein;

Cassette

Internal acceptor

Internal donor

Protein motif
Mouse
Rat
Chimpanzee
Macaque
Dog
chr6_ssto_hap7
HIX0167421
NCR3
Natural cytotoxicity triggering receptor 3 isoform a.

Internal acceptor

Alternative last exon

Rat
Chimpanzee
Macaque
Dog
chr6_ssto_hap7
HIX0167430
HLA-C
RecName: Full=HLA class I histocompatibility antigen, Cw-15 alpha chain; AltName: Full=MHC class I antigen Cw*15; Flags: Precursor;

3'-end AS

Subcellular localization signal
Mouse
Rat
Chimpanzee
Macaque
Dog
chr6_ssto_hap7
HIX0167432
TRIM31
Tripartite motif protein 31.

Cassette

Internal acceptor

Retained intron

Mouse
Rat
Chimpanzee
Macaque
Dog
chr6_ssto_hap7
HIX0167436
CSNK2B
Casein kinase 2, beta polypeptide.

Retained intron

Protein motif
Subcellular localization signal
Mouse
Rat
Chimpanzee
Macaque
Dog
chr6_ssto_hap7
HIX0167437
PPP1R10
Protein phosphatase 1, regulatory subunit 10.

Internal acceptor

Mouse
Rat
Chimpanzee
Macaque
Dog
chr6_ssto_hap7
HIX0167438
STK19
Serine-threonine protein kinase 19 region containing protein.

Retained intron

Subcellular localization signal
Mouse
Rat
Chimpanzee
Macaque
Dog
chr6_ssto_hap7
HIX0167440
MOG
RecName: Full=Myelin-oligodendrocyte glycoprotein; Flags: Precursor;

Cassette

Internal acceptor

Mutually exclusive

Retained intron

Alternative first exon

Alternative last exon

Protein motif
Subcellular localization signal
Transmembrane domain
Mouse
Rat
Chimpanzee
Macaque
Dog
chr6_ssto_hap7
HIX0167442
LY6G5C
SubName: Full=LY6G5C, isoform A; Flags: Fragment;

Internal donor

Retained intron

Alternative first exon

Subcellular localization signal
Transmembrane domain
Mouse
Rat
Chimpanzee
Macaque
chr6_ssto_hap7
HIX0167443
HLA-DRA
RecName: Full=HLA class II histocompatibility antigen, DR alpha chain; AltName: Full=MHC class II antigen DRA; Flags: Precursor;

Cassette

Internal acceptor

Internal donor

Protein motif
Transmembrane domain
Mouse
Rat
Chimpanzee
Macaque
Dog
chr6_ssto_hap7
HIX0167445
LTB
Lymphotoxin-beta isoform a.

Cassette

Protein motif
GO
Mouse
Rat
Chimpanzee
Macaque
Dog
chr6_ssto_hap7
HIX0167452
LY6G6C
Lymphocyte antigen 6 complex G6C.

Cassette

Mouse
Rat
Chimpanzee
Macaque
Dog
chr6_ssto_hap7
HIX0167453

7TM GPCR, rhodopsin-like family protein.

Alternative first exon

Mouse
Rat
Chimpanzee
Macaque
Dog
chr6_ssto_hap7
HIX0167459
TNXB
Similar to Tenascin XB isoform 1 precursor.

Alternative last exon

Protein motif
Mouse
Rat
Chimpanzee
Macaque
Dog
chr7
HIX0167630
SPDYE8P
Similar to RecName: Full=Postmeiotic segregation increased 2-like protein 5;

Cassette

Alternative last exon

Mouse
Rat
Chimpanzee
Macaque
Dog
chr7
HIX0167632
PMS2L5
RecName: Full=Postmeiotic segregation increased 2-like protein 16;

Cassette

Internal acceptor

Mutually exclusive

Alternative last exon

Protein motif
GO
Subcellular localization signal
Mouse
Rat
Chimpanzee
Macaque
Dog
chr9
HIX0169080

Similar to Cytochrome P450, family 4, subfamily F, polypeptide 3.

Cassette

Retained intron

Mouse
Rat
Chimpanzee
Macaque
Dog
chr9
HIX0169086
ANKRD20A4
Ankyrin repeat domain 20 family, member A1.

Cassette

Subcellular localization signal
Rat
Macaque
Dog
chr15
HIX0172620

Similar to SubName: Full=Colon cancer-associated antigen AgSK1-2HT-ECS;

Cassette

Internal acceptor

Internal donor

Retained intron

Mouse
Chimpanzee
Macaque
Dog
chr15
HIX0172622

Similar to SubName: Full=Colon cancer-associated antigen AgSK1-2HT-ECS;

Cassette

Internal acceptor

Internal donor

Retained intron

Mouse
Rat
Chimpanzee
Macaque
Dog
chr15
HIX0172649
POTEB
Similar to Protein expressed in prostate, ovary, testis, and placenta 15.

Cassette

Protein motif
Subcellular localization signal
Mouse
Rat
Macaque
Dog
chr16
HIX0173204
TP53TG3B
RecName: Full=TP53-target gene 3 protein; AltName: Full=TP53-inducible gene 3 protein;

Cassette

Internal acceptor

Internal donor

Retained intron

Mouse
Rat
Chimpanzee
Macaque
Dog
chr17
HIX0173519

Conserved hypothetical protein.

3'-end AS

Subcellular localization signal
Chimpanzee
chr17
HIX0173523

Hypothetical protein.

Internal acceptor

Internal donor

Mouse
Rat
Macaque
Dog
chr17
HIX0173526
TBC1D3H
Similar to TBC1 domain family, member 3E.

Cassette

Internal acceptor

Internal donor

Protein motif
GO
Subcellular localization signal
Mouse
Rat
Chimpanzee
Macaque
Dog
chr17
HIX0173540
CCL4L2
Chemokine (C-C motif) ligand 4-like 2 precursor.

Cassette

Internal acceptor

Protein motif
GO
Transmembrane domain
Chimpanzee
Macaque
Dog
chr17
HIX0173548
CDRT15
Similar to CMT1A duplicated region transcript 15.

Internal donor

Subcellular localization signal
Mouse
Rat
Dog
chr17_ctg5_hap1
HIX0174144
LRRC37A2
Similar to Leucine rich repeat containing 37A.

3'-end AS

Mouse
Rat
Chimpanzee
Macaque
Dog
chrUn_218
HIX0176446

Similar to Tektin-4.

Cassette

Retained intron

Alternative last exon

Mouse
Rat
Dog
chrUn_219
HIX0176447

Similar to Protein FRG1 (FSHD region gene 1 protein).

Internal acceptor

Internal donor

Alternative first exon

Alternative last exon

Mouse
Rat
Chimpanzee
Macaque
Dog
chrUn_222
HIX0176470

Conserved hypothetical protein.

Cassette

Alternative last exon

Mouse
Rat
Chimpanzee
Macaque
Dog
chrUn_223
HIX0176474
ZNF26
Krueppel-associated box domain containing protein.

5'-end AS

Mouse
Rat
Chimpanzee
Macaque
Dog
chrUn_223
HIX0176475
ZNF84
Similar to SubName: Full=Zfp26 protein; SubName: Full=RCG31912, isoform CRA_b;

Internal acceptor

Alternative first exon

Mouse
Rat
Chimpanzee
Macaque
Dog
chrUn_223
HIX0176476
ZNF605
Conserved hypothetical protein.

Alternative first exon

Subcellular localization signal
Transmembrane domain
Mouse
Rat
Chimpanzee
Macaque
Dog
chrX
HIX0176530
CSAG3
Similar to CSAG family, member 2 isoform 2.

Internal acceptor

Internal donor

Subcellular localization signal
Mouse
Rat
Chimpanzee
Macaque
Dog
chrX
HIX0176534
XAGE1E
X antigen family, member 1D isoform 1a.

Internal donor

Subcellular localization signal
Mouse
Rat
Chimpanzee
Macaque
Dog
chrX
HIX0176535
XAGE1E
X antigen family, member 1D isoform 1a.

Internal donor

Subcellular localization signal
Mouse
Rat
Chimpanzee
Dog
chrX
HIX0176541
HSFX1
Heat shock transcription factor family, X linked 1.

Cassette

Mouse
Rat
Chimpanzee
Macaque
Dog
chrX
HIX0176556
WASH6P
RecName: Full=WAS protein family homolog 6; AltName: Full=Protein FAM39A;

Internal acceptor

Mouse
Chimpanzee
Macaque
Dog
chrY
HIX0177589
ZBED1
Dehydrogenase/reductase (SDR family) X-linked.

Alternative first exon

Alternative last exon

Mouse
Rat
Chimpanzee
Macaque
Dog
chrY
HIX0177591
NCRNA00103
Similar to CD99 antigen isoform b precursor.

Cassette

Alternative last exon

Mouse
Rat
Chimpanzee
Macaque
Dog
chrY
HIX0177596
HSFY2
Heat shock transcription factor, Y linked 2 isoform 2.

Cassette

Alternative last exon

Protein motif
Subcellular localization signal
Mouse
Rat
Chimpanzee
Macaque
Dog
chrY
HIX0177598
SPRY3
Sprouty homolog 3.

Cassette

Internal acceptor

Internal donor

Retained intron

Protein motif
GO
Mouse
Rat
Chimpanzee
Macaque
Dog
chrY
HIX0177602
PPP2R3B
EF-Hand type domain containing protein.

Cassette

Protein motif
GO
Subcellular localization signal
Mouse
Rat
Chimpanzee
Macaque
Dog
chrY
HIX0177603
CD99
CD99 antigen isoform a precursor.

Cassette

Alternative last exon

Mouse
Rat
Chimpanzee
Macaque
Dog
chrY
HIX0177604
SLC25A6
Solute carrier family 25, member A6.

Cassette

Internal donor

Retained intron

Subcellular localization signal
Mouse
Rat
Chimpanzee
Macaque
Dog
chrY
HIX0177605
TTTY8B
Conserved hypothetical protein.

Alternative last exon

Mouse
Rat
Macaque
Dog
chrY
HIX0177606
TTTY8B
Conserved hypothetical protein.

Alternative last exon

Mouse
Rat
Macaque
Dog
chrY
HIX0177607
FAM197Y2P
Nucleosome assembly protein (NAP) family protein.

Cassette

Alternative first exon

Mouse
Rat
Macaque
Dog
chrY
HIX0177609
IL9R
Similar to Interleukin 9 receptor precursor.

Cassette

Internal acceptor

Alternative last exon

Protein motif
GO
Subcellular localization signal
Mouse
Rat
Chimpanzee
Macaque
Dog
chrY
HIX0177610
VAMP7
Vesicle-associated membrane protein 7 isoform 1.

Cassette

Internal donor

Protein motif
GO
Subcellular localization signal
Mouse
Rat
Chimpanzee
Macaque
Dog
chrY
HIX0177613
BPY2C
Variable charge, Y chromosome, 2 protein.

Cassette

Internal donor

Mouse
Rat
Chimpanzee
Macaque
Dog
chrY
HIX0177614
BPY2C
Variable charge, Y chromosome, 2 protein.

Cassette

Internal donor

Mouse
Rat
Macaque
Dog
chrY
HIX0177615
BPY2C
Variable charge, Y chromosome, 2 protein.

Cassette

Internal donor

Mouse
Rat
Chimpanzee
Macaque
Dog
chrY
HIX0177632
TTTY6B
Conserved hypothetical protein.

Cassette

Mouse
Rat
Dog
chrY
HIX0177633
TTTY6B
Conserved hypothetical protein.

Cassette

Mouse
Rat
Chimpanzee
Macaque
Dog
chrY
HIX0177643
WASH6P
RecName: Full=WAS protein family homolog 6; AltName: Full=Protein FAM39A;

Internal acceptor

Mouse
Rat
Chimpanzee
Macaque
Dog
chr6
HIX0184166
HCP5
Hypothetical protein.

Retained intron

Subcellular localization signal
Mouse
Rat
Chimpanzee
Macaque
Dog
chr6
HIX0184168
RGL2
Ral guanine nucleotide dissociation stimulator-like 2.

Cassette

Internal acceptor

Retained intron

Protein motif
GO
Subcellular localization signal
Rat
Chimpanzee
Macaque
Dog
chr6
HIX0184169
HSPA1A
Heat shock protein 70 family protein.

Internal acceptor

Internal donor

Retained intron

Protein motif
Mouse
Rat
Chimpanzee
Macaque
Dog
chr6
HIX0184175
SLC39A7
Solute carrier family 39, member 7.

Cassette

Internal acceptor

Internal donor

Retained intron

Alternative first exon

Protein motif
Transmembrane domain
Mouse
Rat
Macaque
Dog
chr6
HIX0184178
RNF5
Ring finger protein 5.

Alternative last exon

Transmembrane domain
Mouse
Rat
Chimpanzee
Dog
chr6
HIX0184190
HLA-DOA
Major histocompatibility complex, class II, DO alpha precursor.

Internal acceptor

Protein motif
GO
Mouse
Rat
Chimpanzee
Macaque
Dog
chr6
HIX0184192
APOM
Apolipoprotein M.

Alternative first exon

Rat
Chimpanzee
Macaque
Dog
chr6
HIX0184195
TNF
Tumor necrosis factor alpha.

5'-end AS

Mouse
Rat
Chimpanzee
Macaque
Dog
chr6
HIX0184198
OR2H1
Olfactory receptor, family 2, subfamily H, member 1.

Cassette

Internal acceptor

Retained intron

Alternative first exon

Macaque
chr6
HIX0184206
PSMB9
Proteasome beta 9 subunit isoform 1 proprotein.

Retained intron

Protein motif
GO
Subcellular localization signal
Mouse
Rat
Chimpanzee
Macaque
Dog
chr6
HIX0184211
RPS18
Ribosomal protein S18.

Cassette

Retained intron

Protein motif
GO
Subcellular localization signal
Mouse
Chimpanzee
chr6
HIX0184216
RNF39
Ring finger protein 39 isoform 1.

Cassette

Internal acceptor

Internal donor

Protein motif
Mouse
Rat
Chimpanzee
Macaque
Dog
chr6
HIX0184228
RXRB
Retinoid X receptor, beta.

Cassette

Internal acceptor

Retained intron

Protein motif
GO
Subcellular localization signal
Mouse
Chimpanzee
Macaque
Dog
chr6
HIX0184238
LY6G6C
Lymphocyte antigen 6 complex G6C.

Cassette

Mouse
Macaque
chr6_mcf_hap5
HIX0186567
HLA-C
HLA class I histocompatibility antigen, Cw-4 alpha chain precursor (MHC class I antigen Cw*4).

Internal acceptor

Protein motif
Subcellular localization signal
Mouse
Rat
Chimpanzee
Macaque
Dog
chr7
HIX0187323

Non-protein coding transcript.

Alternative first exon

Alternative last exon

Dog
chr11
HIX0191666
PCSK7
Similar to Proprotein convertase subtilisin/kexin type 7 preproprotein.

Cassette

Mouse
Rat
Chimpanzee
Macaque
Dog
chr15
HIX0193611
UBE2Q2P3
Similar to SubName: Full=Colon cancer-associated antigen AgSK1-2HT-ECS;

Cassette

Retained intron

Alternative last exon

Mouse
Rat
Macaque
Dog
chr15
HIX0193624
DDX11L9
Conserved hypothetical protein.

Internal acceptor

Internal donor

Subcellular localization signal
Mouse
Rat
Macaque
Dog
chr16
HIX0194347

Similar to NPIP-like protein (Fragment).

Cassette

Protein motif
Subcellular localization signal
Mouse
Rat
Chimpanzee
Macaque
Dog
chr16
HIX0194373
DDX11L11
Conserved hypothetical protein.

Internal acceptor

Subcellular localization signal
Mouse
Rat
Chimpanzee
Macaque
Dog
chr1
HIX0199980
HIST2H4B
Histone cluster 4, H4.

Internal donor

Mouse
Rat
Chimpanzee
Macaque
Dog
chr2
HIX0200261
RNPEPL1
Arginyl aminopeptidase-like 1 (EC 3.4.11.-) (RNPEP-like protein).

Retained intron

Protein motif
Subcellular localization signal
Rat
chr2
HIX0200292

Similar to Glycine cleavage system H protein, mitochondrial precursor.

Internal acceptor

Alternative first exon

Mouse
Chimpanzee
chr4
HIX0200660

Pseudogene candidate (Similar to WD repeat-containing protein 5 (BMP2-induced 3-kb gene protein).).

Internal donor

Mouse
Rat
chr6
HIX0200874
GTF2H4
General transcription factor IIH, polypeptide 4, 52kDa.

Internal donor

Mouse
Rat
Chimpanzee
Macaque
Dog
chr6
HIX0200895
HLA-L
Similar to SubName: Full=Major histocompatibility complex, class I, AG;

Retained intron

Alternative last exon

Subcellular localization signal
Transmembrane domain
Mouse
Dog
chr6
HIX0200907
PPP1R11
Protein phosphatase 1, regulatory (inhibitor) subunit 11.

Cassette

Retained intron

Mouse
Rat
Chimpanzee
Macaque
Dog
chr6
HIX0200930
LTB
Lymphotoxin-beta isoform a.

Cassette

Protein motif
GO
Mouse
Rat
Chimpanzee
Macaque
Dog
chr7
HIX0201150

Hypothetical protein.

Cassette

Mouse
Rat
chr8
HIX0201298
ZNF517
Krueppel-associated box domain containing protein.

Internal donor

Retained intron

Protein motif
GO
Subcellular localization signal
Rat
chr9
HIX0201410
LCN6
Epididymal-specific lipocalin-6 precursor (Lipocalin-5).

Retained intron

Protein motif
GO
Subcellular localization signal
Chimpanzee
chr11
HIX0201645
B3GNT1
N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase (EC 2.4.1.149) (Poly-N-acetyllactosamine extension enzyme) (I-beta- 1,3-N-acetylglucosaminyltransferase) (iGnT) (UDP-GlcNAc:betaGal beta- 1,3-N-acetylglucosaminyltransferase 1).

Retained intron

Subcellular localization signal
Macaque
chr11
HIX0201682
PATE4
Hypothetical protein.

Cassette

Alternative last exon

Dog
chr16
HIX0202261
KIAA0664L3
Conserved hypothetical protein.

Cassette

Mouse
Rat
Dog
chr16
HIX0202314

Similar to Polycystic kidney disease-associated protein.

Internal donor

Retained intron

Protein motif
GO
Mouse
Rat
Macaque
chr16
HIX0202336
BCAR4
Hypothetical protein.

Cassette

Mouse
Rat
Dog
chr18
HIX0202663
ZNF396
Conserved hypothetical protein.

3'-end AS

Protein motif
GO
Rat
chr19
HIX0202719
ZNF69
Similar to Inhibitor of four 1.

Internal acceptor

Alternative first exon

Dog
chr19
HIX0202759

Hypothetical protein.

Retained intron

Mouse
Rat
Dog
chr19
HIX0202767
ZNF28
Krueppel-associated box domain containing protein.

Cassette

Alternative first exon

Alternative last exon

Protein motif
GO
Subcellular localization signal
Transmembrane domain
Mouse
Rat
Dog
chr19
HIX0202782
ZNF480
Krueppel-associated box domain containing protein.

Cassette

Mutually exclusive

Protein motif
GO
Mouse
chr19
HIX0202788

Hypothetical protein.

Cassette

Internal acceptor

Alternative first exon

Mouse
Rat
Dog
chr19
HIX0202821
RAX2
Retina and anterior neural fold homeobox protein 2 (Retina and anterior neural fold homeobox-like protein 1) (Q50-type retinal homeobox protein).

Internal acceptor

Retained intron

Mouse
Rat
chr19
HIX0202842
ZNF417
Zinc finger, C2H2-type domain containing protein.

Cassette

Macaque
chr19
HIX0202863
CEACAM22P
Immunoglobulin domain containing protein.

Internal acceptor

Mouse
Rat
chr20
HIX0203076

Latherin precursor (Breast cancer and salivary gland-expressed protein).

Internal acceptor

Mouse
Rat
chr21
HIX0203133
DSCR9
Down syndrome critical region protein 9.

Cassette

Internal acceptor

Mutually exclusive

Subcellular localization signal
Rat