H-InvDB x AHG DB
Evola
ver. 7.5
H-InvDB_7.5 released on September 10, 2010.
H-InvDB Advanced Search
Home Quick guide Navi BLAST Site map Download Contact us Help
[ Japanese ]
Data download

  Evola_7.5
   SET of Evola ortholog list 3.0 MB Download
      "Evola.txt.gz" provides ortholog accession number list of Evola 7.5.
  Inter-species multi-FASTA (Transcript)
   SET of Evola ortholog sequences (Transcript) 142 MB Download
      "NFAS.tar.gz" provides multiple FASTA of transcript nucleotide sequences of human and the vertebrate orthologs.
  Inter-species multi-FASTA (Protein)
   SET of Evola ortholog sequences (Protein) 43 MB Download
      "PFAS.tar.gz" provides multiple FASTA of protein amino acid sequences of human and the vertebrate orthologs.
  Phylogenetic trees
   SET of Evola duplicate gene family trees (Flat File) 4.2 MB Download
      "NJ.tar.gz" provides the phylogenetic trees (.tre files) of orthologues/gene families inferred by Weighted Neighbor Joining (Weighbor) method assuming WAG+Γ-F model, using amino acid sequences.
  dN/dS ratios
   SET of dN/dS ratios between orthologues (Flat File) 8.6 MB Download
      "DNDS.txt.gz" provides the ratio of dN (number of nonsynonymous substitutions per site) to dS (number of synonymous substituitons per site) in each human-vertebrate ortholog pair.
  H-InvDB-Evolution_7.5
   SET of all H-InvDB transcripts (Flat File) 23 MB Download
      Section of molecular evolutionary analysis is provided in flat file format ("FEVOL").